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MBC in Press, published online ahead of print February 22, 2002
Mol. Biol. Cell 10.1091/mbc.01-10-0498

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Submitted on October 15, 2001
Revised on December 14, 2001
Accepted on January 8, 2002

Regulation of the Fab1 PtdIns(3)P 5-kinase pathway by the Vac7 protein and Fig4, a polyphosphoinositide phosphatase family member

Jonathan D. Gary1, Trey K. Sato1, Christopher J. Stefan1, Cecilia J. Bonangelino2, Lois S. Weisman2, and Scott D. Emr1*

1 Department of Cellular and Molecular Medicine and the Howard Hughes Medical Institute, University of California at San Diego, School of Medicine, La Jolla, California 92093-0668
2 Department of Biochemistry, University of Iowa, Iowa City, Iowa 52242

* Corresponding author. E-mail address: semr{at}ucsd.edu.

The Saccharomyces cerevisiae FAB1 gene encodes the sole phosphatidylinositol 3-phosphate [PtdIns(3)P] 5-kinase responsible for synthesis of the polyphosphoinositide PtdIns(3,5)P2. VAC7 encodes a 128 kD transmembrane protein which localizes to vacuolar membranes. Both vac7 and fab1 null mutants have dramatically enlarged vacuoles and cannot grow at elevated temperatures. Additionally, vac7{Delta} mutants have nearly undetectable levels of PtdIns(3,5)P2, suggesting that Vac7 functions to regulate Fab1 kinase activity. To test this hypothesis, we isolated a fab1 mutant allele that bypasses the requirement for Vac7 in PtdIns(3,5)P2 production. Expression of this fab1 allele in vac7{Delta} mutant cells suppresses the temperature-sensitivity, vacuolar morphology, and PtdIns(3,5)P2 defects normally exhibited by vac7{Delta} mutants. We also identified a mutant allele of FIG4, whose gene product contains a Sac1 polyphosphoinositide phosphatase domain, which suppresses vac7{Delta} mutant phenotypes. Deletion of FIG4 in vac7{Delta} mutant cells suppresses the temperature-sensitivity and vacuolar morphology defects, and dramatically restores PtdIns(3,5)P2 levels. These results suggest that generation of PtdIns(3,5)P2 by the Fab1 lipid kinase is regulated by Vac7, while turnover of PtdIns(3,5)P2 is mediated in part by the Sac1 polyphosphoinositide phosphatase family member, Fig4.




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