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Originally published as MBC in Press, 10.1091/mbc.02-02-0026 on April 3, 2002
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Vol. 13, Issue 6, 2045-2056, June 2002

Subunit H of the V-ATPase Involved in Endocytosis Shows Homology to beta -Adaptins

Matthias Geyer,*dagger Dagger Oliver T. Fackler,§ and B. Matija Peterlin*§

 *Howard Hughes Medical Institute, Departments of Medicine, Microbiology, and Immunology, University of California at San Francisco, California 94143-0703;  dagger Max-Planck-Institute for Molecular Physiology, Department of Physical Biochemistry, 44227 Dortmund, Germany; and  §Institute for Hygiene, Department of Virology, University of Heidelberg, 69120 Heidelberg, Germany

The vacuolar ATPase (V-ATPase) is a multisubunit enzyme that facilitates the acidification of intracellular compartments in eukaryotic cells and plays an important role in receptor-mediated endocytosis, intracellular trafficking processes, and protein degradation. In this study we show that the C-terminal fragment of 350 residues of the regulatory subunit H (V1H) of the V-ATPase shares structural and functional homologies with the beta -chains of adaptor protein complexes. Moreover, the fragment is similar to a region in the beta -subunit of COPI coatomer complexes, which suggests the existence of a shared domain in these three different families of proteins. For beta -adaptins, this fragment binds to cytoplasmic di-leucine-based sorting motifs such as in HIV-1 Nef that mediate endocytic trafficking. Expression of this fragment in cells blocks the internalization of transmembrane proteins, which depend on di-leucine-based motifs, whereas mutation of the consensus sequence GEY only partly diminishes the recognition of the sorting motif. Based on recent structural analysis, our results suggest that the di-leucine-binding domain consists of a HEAT or ARM repeat protein fold.


Dagger Corresponding authors. E-mail addresses: geyer{at}mpimf-heidelberg.mpg.de and matija{at}itsa.ucsf.edu.


Molecular Biology of the Cell
Vol. 13, 2045-2056, June 2002
Copyright © 2002 by The American Society for Cell Biology



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