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Vol. 11, Issue 9, 2973-2985, September 2000


*Molecular Medicine Division, Oregon Health Sciences University,
Portland, Oregon 97201;
Department of Medicine,
University of Pennsylvania, Philadelphia, Pennsylvania 19104;
and §Cardiovascular Research Unit, University of
California, San Francisco, California 94143
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ABSTRACT |
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The topology of most eukaryotic polytopic membrane proteins is established cotranslationally in the endoplasmic reticulum (ER) through a series of coordinated translocation and membrane integration events. For the human aquaporin water channel AQP1, however, the initial four-segment-spanning topology at the ER membrane differs from the mature six-segment-spanning topology at the plasma membrane. Here we use epitope-tagged AQP1 constructs to follow the transmembrane (TM) orientation of key internal peptide loops in Xenopus oocyte and cell-free systems. This analysis revealed that AQP1 maturation in the ER involves a novel topological reorientation of three internal TM segments and two peptide loops. After the synthesis of TMs 4-6, TM3 underwent a 180-degree rotation in which TM3 C-terminal flanking residues were translocated from their initial cytosolic location into the ER lumen and N-terminal flanking residues underwent retrograde translocation from the ER lumen to the cytosol. These events convert TM3 from a type I to a type II topology and reposition TM2 and TM4 into transmembrane conformations consistent with the predicted six-segment-spanning AQP1 topology. AQP1 topological reorientation was also associated with maturation from a protease-sensitive conformation to a protease-resistant structure with water channel function. These studies demonstrate that initial protein topology established via cotranslational translocation events in the ER is dynamic and may be modified by subsequent steps of folding and/or maturation.
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INTRODUCTION |
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The biogenesis of polytopic membrane proteins in the endoplasmic
reticulum (ER) involves the proper positioning of transmembrane (TM)
helices, coordinated folding of cytosolic and lumenal peptide domains,
and helical packing within the lipid bilayer. One model predicts that
protein topology is established through cotranslational translocation
and integration events as the nascent chain emerges from the ribosome
(Blobel, 1980
; Rapoport et al., 1996
; Johnson, 1997
). During
this process, signal sequences target the nascent chain to the ER,
facilitate ribosome binding to the Sec61 translocation complex
(translocon), and open a large aqueous channel in the ER membrane
through which the nascent polypeptide moves (Simon and Blobel, 1991
;
Crowley et al., 1994
; Jungnickel and Rapoport, 1995
; Mothes
et al., 1997
). Stop-transfer sequences subsequently terminate translocation, close the translocon, disrupt the
ribosome-membrane junction, and direct the polypeptide laterally into
the lipid bilayer (Yost et al., 1983
; Do et al.,
1996
; Liao et al., 1997
; Mothes et al., 1997
). By
regulating ribosome binding and translocon gating, signal and
stop-transfer sequences are thereby able to direct specific regions of
the elongating nascent chain into the cytosol or ER lumen and to
coordinate the sequential orientation and integration of multiple TM
segments (Rothman et al., 1988
; Wessels and Spiess, 1988
;
Lipp et al., 1989
).
In recent years, it has become evident that certain naturally occurring
polytopic proteins exhibit variations in biogenesis that do not follow
a simple cotranslational model (Hegde and Lingappa, 1997
; Johnson,
1997
). First, signal sequences that direct translocation of N-terminal
flanking residues may result in the posttranslational positioning of
peptide loops and/or TM segments (Lu et al., 1997
; Ota
et al., 1998
). Second, certain topogenic determinants
terminate translocation but fail to integrate into the membrane,
suggesting that TM segments may coassemble within or near the
translocon before fully entering the lipid bilayer (Audigier et
al., 1987
; Skach and Lingappa, 1993
; Skach et al.,
1994
; Lin and Addison, 1995
; Borel and Simon, 1996
). Third, the correct
positioning of TM segments may require the synthesis of distal
C-terminal peptide regions, indicating that initial translocation
events may not necessarily dictate the topology of the mature protein
(Wilkinson et al., 1996
). Thus, to predict the effects of
structural determinants on topological outcome, it will be necessary to
define different topogenic pathways through which polytopic proteins
acquire their specific topology (Hegde and Lingappa, 1997
; Johnson,
1997
; Bibi, 1998
).
Previously, we examined the biogenesis of two related proteins,
aquaporin-1 (AQP1/CHIP28) and aquaporin-4 (AQP4/MIWC), and showed that
they use markedly different folding pathways to acquire their
transmembrane topology at the ER membrane (Skach et al., 1994
; Shi et al., 1995
). AQP1 and AQP4 are ~70%
homologous, and each contains six predicted TM segments that form a
water-selective pore in biological membranes (Hasegawa et
al., 1994
; Verkman et al., 1996
; Agre et
al., 1998
). Analysis of sequentially truncated AQP4 fusion
proteins demonstrated that the six-segment-spanning (six-spanning) AQP4
topology was established through a series of cotranslational
translocation and integration events by alternating signal and
stop-transfer sequences (Shi et al., 1995
). In contrast, a
parallel analysis revealed that topogenic determinants encoded within
AQP1 cotranslationally directed a topology with only four TM segments
(Skach et al., 1994
). This latter finding was particularly unexpected because mature AQP1 at the plasma membrane contains six TM
segments, as originally predicted (Preston and Agre, 1991
; Preston
et al., 1994
; Cheng et al., 1997
; Walz et
al., 1997
). These results suggested either that the majority of
AQP1 is synthesized in a misfolded (i.e. four-spanning) conformation
that is degraded before reaching the plasma membrane or, alternatively,
that AQP1 maturation involves an unusual topological reorientation to
achieve its six-spanning topology.
To determine the relationship between the four-spanning and six-spanning AQP1 structures, we analyzed a series of AQP1 constructs containing two separate translocation reporters and followed the dynamic topology of internal TM segments as a function of nascent chain length. We now show that AQP1 maturation proceeds through a complex folding pathway that involves at least three distinct steps: cotranslational formation of a transient four-spanning topology, topological rearrangement of internal TM segments into a loosely folded six-spanning topology, and final compaction of the transmembrane core to a protease-resistant conformation. These studies thus identify an unexpected level of complexity in polytopic protein biogenesis and demonstrate that the initial protein topology at the ER membrane is dynamic and may be modified by subsequent steps of folding and/or maturation.
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MATERIALS AND METHODS |
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cDNA Constructs
Plasmid pSP64.CHIP28 (Skach et al., 1994
) was used as
the template for PCR amplifications to generate myc-tagged AQP1
constructs. BstEII restriction sites were inserted into
pSP64.CHIP28 at codons P77 and T120 with overlapping sense and
antisense oligonucleotides (Ho et al., 1989
). A synthetic
oligonucleotide encoding the c-myc epitope, 9E10 (Evan et
al., 1985
), with compatible 5' overlapping BstEII ends
was ligated into these sites to generate plasmids AQP1.P77.myc and
AQP1.T120.myc. The resulting sequence (verified by DNA sequencing)
encoded the following amino acid
residues:AQP1.P77.myc LNP-VT-EQKLISEEDL-VT-TLG AQP1.T120.myc SLT-VT-EQKLISEEDL-VT-GNS
where VT represents codons inserted by the
BstEII restriction site, and EQKLISEEDL represents the myc
epitope. Plasmids T120.myc.TM3T,
-TM4T, -TM5T, and
-TM6T were generated by ligating an
AvaI fragment from previously described CHIP28 clones 6, 7, 8, and 9, respectively (Skach et al., 1994
), into the
AQP1.T120.myc plasmid digested with AvaI. These plasmids encode the AQP1 coding sequence up to residues L139, P169, V214, or
V264, respectively, followed by a 142-residue C-terminal fragment of
bovine prolactin (P) described previously (Rothman et al., 1988
). The locations of the myc epitope and the C-terminal fusion sites
in these constructs are shown schematically in Figure
1. AQP1 fusion proteins containing the P
reporter at residues R93, V107, and L139 were described previously
(Skach et al., 1994
). Plasmid AQP1.T120.P (containing the P
reporter fused to AQP1 residue T120) was generated by PCR amplification
of pSP64.CHIP28 with the use of sense oligonucleotide, SP6 promoter,
and antisense oligonucleotide AAGCGAGGTCACCGTCAGGGAGGAGGTGAT. PCR
fragments were digested with NcoI and BstEII and
ligated upstream of the P reporter in an
NcoI-BstEII-digested vector, S.L.ST.gG.P, as described previously (Skach and Lingappa, 1994
). Plasmid myc.AQP1 was
generated by digesting pSP64.CHIP28 with NcoI (at the ATG start codon) and ligating synthetic oligonucleotides with compatible overlapping ends encoding the myc epitope. The resulting N-terminal sequence encoded residues MEQKLISEEDL-M.
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In Vitro Transcription/Translation
mRNA was transcribed with SP6 RNA polymerase (New England
Biolabs, Beverly, MA) in a 10-µl volume at 40°C for 1 h, as
described previously (Skach et al., 1994
). Aliquots were
used immediately or frozen in liquid nitrogen and stored at
80°C.
The transcription mixture was added directly to the translation mixture
containing [35S]methionine
(Tran35S-label, ICN Pharmaceuticals, Irvine, CA)
and 40% rabbit reticulocyte lysate (RRL), and translation was carried
out for 1 h at 24°C under conditions described previously
(Skach, 1998
). Microsomal membranes prepared from dog pancreas (Walter
and Blobel, 1983
) were added to a final concentration of
A280 = 8.0 at the start of translation. In
experiments in which oocyte membranes were used, 200-µl aliquots of
frozen membranes (prepared as described below) were quickly thawed,
diluted with 0.3 volume of 90 mM KCl, 50 mM HEPES, pH 7.1, and spun at
10,000 × g for 10-15 min at 4°C. Supernatant was
removed in its entirety, and the pellet (~2 µl volume) was
resuspended directly into 18 µl of translation mixture. Translation
was then carried out as described above. For pulse-chase experiments,
translation was terminated after 1 h by the addition of
cycloheximide (0.5 mM), and samples were incubated at 24°C for the
indicated times.
Xenopus laevis Oocyte Expression
For functional studies, plasmids were linearized with
BamHI and transcribed in vitro, and transcript mixture was
injected directly into defolliculated stage V or VI Xenopus
laevis oocytes as described (Zhang and Verkman, 1991
). For
topology and protein analysis, 50 µCi of
[35S]methionine (0.5 µl of a 10×
concentrated Tran35S-label [ICN
Pharmaceuticals]) was added to 2 µl of transcription mixture and
injected into stage VI Xenopus oocytes (50 nl/oocyte) on
ice. After incubation at 18°C in modified Barth's solution [MBS; 88 mM NaCl, 1 mM KCl, 2.4 mM NaHCO3, 0.82 mM
MgSO4, 0.33 mM
Ca(NO3)2, 0.41 mM
CaCl2, 10 mM sodium HEPES, pH 7.4], oocytes were
homogenized on ice in 10 volumes of 0.25 M sucrose, 50 mM acetate, 5 mM Mg acetate, 1.0 mM DTT, 50 mM Tris, pH 7.5, with the use of a Teflon hand-held homogenizer. Under these conditions, synthesis of radiolabeled constructs required a minimum of 60-90 min,
and proteolysis was performed at a time of maximal synthesis when
polypeptides were localized to the ER compartment (our unpublished results). For pulse-chase experiments, Xenopus oocytes were
incubated for 1.5-3 h in MBS and then chased in MBS containing 2 mM
methionine to prevent further incorporation of radioisotope (Xiong
et al., 1997
).
Oocyte Water Permeability
Oocyte water permeability was determined 24-48 h after
injection with the use of a swelling assay (Zhang and Verkman, 1991
). The time course of swelling was measured in response to a 20-fold dilution of the extracellular Barth's buffer with distilled water. Oocyte volume was measured in 1-s intervals by quantitative imaging. Temperature control was maintained by a circulating water bath. Oocyte
water permeability (Pf) was calculated from the
initial rate of swelling [d(V/V0)/dt] by the
relation:Pf = [d(V/V0)/dt]/[(S/V0)Vw(Osmout
Osmin],
where S/V0 = 50 cm
1, Vw = 18 cm3/mol, and Osmout
Osmin = 190 mOsm.
Preparation of Xenopus Oocyte Membranes
Xenopus laevis oocytes (XO) membranes were prepared
as described by Kobilka (1990)
with some modification. Stage VI
Xenopus oocytes were surgically harvested, dissected, and
treated with collagenase (type IV, 2 mg/ml; Sigma Chemical, St. Louis,
MO) at room temperature for 45 min. Oocytes were rinsed five times with
5 volumes of 90 mM KCl, 50 mM HEPES, pH 7.1. Buffer was replaced with
40% sucrose (wt/vol) in 90 mM KCl, 50 mM HEPES, pH 7.1, equal to the
volume of the oocytes. All subsequent steps were carried out at
0-4°C. The oocytes were gently broken by passing the mixture through
an 18-gauge 1.5-inch needle 10 times. The homogenate was then
centrifuged for 3 min at 3000 × g. The supernatant was
transferred to a new tube, and the process was repeated five times. The
resulting milky white supernatant, containing cytosol and membranes,
was divided into 200-µl aliquots, frozen in liquid nitrogen, and
stored at
80°C.
Protease Digestion
Protease digestion was performed as described previously (Skach
et al., 1994
). Translation mixture or XO homogenate was
divided into aliquots on ice, and CaCl2 was added
to 10 mM final concentration. Proteinase K (PK) was then added (0.2 mg/ml final concentration) in the presence or absence of 1% Triton
X-100. Samples were incubated on ice for 1 h, and residual
protease was inactivated by rapid mixing with PMSF (10 mM) and boiling
in 10 volumes of 1% SDS, 0.1 M Tris, pH 8.0, for 5 min. Samples were
then diluted in >10 volumes of buffer A (0.1 M NaCl, 1% Triton X-100,
2 mM EDTA, 0.1 mM PMSF, 0.1 M Tris, pH 8.0). RRL samples were
immunoprecipitated directly. XO samples were incubated at 4°C for
1-2 h and centrifuged at 16,000 × g for 15 min to
remove insoluble debris before immunoprecipitation. Accuracy of the
protease protection assay was regularly assessed with the use of a
secretory control protein. Only experiments in which protection of the
control was consistently >85% were used. Because protease protection
was typically 90-95% efficient, the actual translocation efficiency
of aquaporin constructs is likely slightly higher than the calculated values.
Immunoprecipitation and Immunoadsorption
For immunoprecipitation, anti-prolactin antiserum (ICN
Biomedicals, Costa Mesa, CA) or mAb myc-9E10 (Evan et al.,
1985
) (mouse ascites) at 1:1000 dilution was added to translation
products solubilized in buffer A. After 10-30 min of preincubation,
5.0 µl of protein A-Affigel (Bio-Rad, Richmond, CA) was added, and samples were rotated at 4°C for 10 h before washing three times with buffer A and twice with 0.1 M NaCl, 0.1 M Tris, pH 8.0, and addition of SDS sample buffer.
For immunoadsorption, translation products were layered onto 0.5 M sucrose, 100 mM KCl, 5.0 mM MgCl2, 1.0 mM DTT, 50 mM HEPES, pH 7.5, and centrifuged at 180,000 × g for 10 min at 4°C. The membrane pellet was resuspended in 50 µl of ice-cold 0.1 M sucrose, 0.1 M KCl, 5 mM MgCl2, 1 mM DTT, 50 mM HEPES, pH 7.5, and diluted into 0.5 ml of 0.1 M NaCl, 0.1 M Tris, pH 8.0, in the presence (immunoadsorption) or absence (immunoprecipitation) of antibody. Aliquots were incubated at 4°C for 2 h and centrifuged at 16,000 × g for 30 min, and pellets were dissolved in buffer A. Protein A-Affigel (5 µl) was added to each tube, and antibody was added to the immunoprecipitation tube. Subsequent steps were the same as those described for immunoprecipitation.
Autoradiography and Quantitation
Samples were analyzed by SDS-PAGE (EN3HANCE, Dupont/New England Nuclear, Boston, MA), fluorography, and autoradiography. Autoradiograms were quantitated with the use of a Pharmacia LKB (Piscataway, NJ) Image Master DTS densitometer (and/or phosphorimaging) and quantitated with the use of Image Master 1D software version 1.0 (Pharmacia LKB). Before analysis, the densitometer was precalibrated with a Kodak (Rochester, NY) photographic step tablet (0.2-OD intervals) to correct for film nonlinearity (0.07-1.8 OD units). The linearity of densitometry was confirmed by multiple timed exposures of serially diluted translation products over a 40-fold concentration range and by direct comparison with phosphorimaging analysis with the use of a Bio-Rad Personal Molecular Imager Fx (Kodak screens, Quant-1 software). Band intensities were calculated based on the volume averaged pixel intensity (OD × mm2) of autoradiograms and/or by direct phosphorimaging of gels. Translocation efficiencies were determined by correcting for the fractional methionine content remaining in the protease-protected peptide fragments relative to starting materials. AQP1 contains three methionine residues at positions 1, 96, and 266 (Figure 1). The P reporter contains four methionine residues. Except as noted, the calculated translocation efficiencies represent the sum of the indicated fragments in which the reporter epitope was protected in the absence of detergent. Figures were prepared from representative autoradiograms with the use of an AGFA (Gruciert, NV) Studio Scan II transmission scanner and Adobe (Mountain View, CA) Photoshop software.
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RESULTS |
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Construction of Epitope-tagged AQP1 Fusion Proteins
C-terminal translocation reporters are increasingly being used to
study the biogenesis and topology of prokaryotic and eukaryotic polytopic integral membrane proteins (Boyd et al., 1990
;
Broome-Smith et al., 1990
; Chavez and Hall, 1992
; Traxler
et al., 1993
; Skach et al., 1994
; Beja and Bibi,
1995
; Shi et al., 1995
; Whale and Stoffel, 1996
;
Schmidt-Rose and Jentsch, 1997
; Ota et al., 1998
). In this
technique, the nascent chain is sequentially truncated and ligated to a
reporter domain, and the orientation of the reporter relative to the
membrane is used to infer the topology of the fusion site. By analyzing
a series of such fusion proteins, it is possible to define the topology
of the nascent chain at specific stages of protein synthesis and to
localize topogenic determinants that initiate and terminate
translocation. Because each construct provides topological information
at only one fusion site and because residues downstream of the fusion
site are deleted, the resulting topology reflects only those
translocation events that are directed by upstream, i.e., N-terminal,
topogenic determinants. This is not a problem for proteins that acquire
their topology cotranslationally. However, it has important
implications if the initial cotranslational topology differs from the
topology of the mature protein.
Topological analyses have previously demonstrated that the initial
topology of AQP1 at the ER membrane contains four TM segments and three
extramembranous peptide loops, whereas the mature protein at the plasma
membrane contains six TM segments connected by five peptide loops
(Preston et al., 1994
; Skach et al., 1994
).
Experimental differences in AQP1 topology are primarily limited to the
transmembrane orientation of TM3 and its flanking residues (Figure 1A).
In particular, TM3 N-terminal and C-terminal flanking residues are
initially directed into the ER lumen and cytosol, respectively, during
AQP1 synthesis (Skach et al., 1994
), but they reside in the
opposite orientation on functionally mature AQP1 molecules (Preston
et al., 1994
). The hypothesis of this study is that AQP1
maturation involves a 180-degree rotation of TM3 from its initial type
I topology to its mature type II topology. Such a rotation would properly position TM3 flanking residues and also orient TM2 and TM4
into their final transmembrane orientations without altering the
topology of other regions of the protein (Figure 1A).
To monitor TM3 topology, a 10-residue c-myc epitope tag (Evan et
al., 1985
) was engineered into either the TM3-TM4 peptide loop at
residue T120 or within the TM2-TM3 peptide loop at position P77 of AQP1
(Figure 1B). The resulting plasmids (AQP1.T120.myc and AQP1.P77.myc)
were then sequentially truncated at residues L139, P169, V214, or V264
after TM segments 3, 4, 5, and 6, respectively, and fused to a passive
C-terminal translocation reporter (P) derived from bovine prolactin
(Rothman et al., 1988
). The predicted sizes of truncated,
myc-tagged AQP1 polypeptides are indicated in Figure 1B. The P
reporter, which encodes 142 C-terminal residues from the secretory
protein bovine prolactin, has a molecular mass of ~15 kDa.
If TM3 reoriented from a type I to a type II topology, then the myc epitope at position T120 would translocate from the cytosol to the ER lumen, whereas the epitope at position P77 would move from the ER lumen back into the cytosol (Figure 1A). Reorientation of TM3 flanking residues would thus serve as a marker for conversion of AQP1 from a four-spanning to a six-spanning topology, because this would also likely bring TM2 and TM4 into their proper membrane-spanning orientations (Figure 1). By simultaneously characterizing the protease accessibility of myc and P reporters in nascent chains of increasing length, we reasoned that it should be possible to define the point, either during or after AQP1 synthesis, at which such reorientation occurs.
Effect of Epitope Insertion on AQP1 Function
To determine whether the presence of the myc epitope grossly
altered AQP1 folding, we first expressed full-length AQP1.T120.myc and
AQP1.P77.myc proteins in XO, which are known to efficiently synthesize
functional water channels (Zhang and Verkman, 1991
; Preston et
al., 1992
). Oocytes were microinjected with wild-type or
myc-tagged AQP1 cRNA, and plasma membrane water permeability was
determined by osmotically induced swelling. As shown in Figure 1C,
AQP1.T120.myc exhibited nearly 70% of wild-type AQP1 water channel
activity. This is consistent with the findings of Preston et
al. (1994)
that T120 is a permissive site for epitope insertion. In contrast, myc insertion in the TM2-TM3 peptide loop (AQP1.P77.myc) resulted in very poor expression and rapid degradation of AQP1 (our
unpublished results) and nearly complete disruption of water channel
activity (Figure 1C). For these reasons, initial experiments focused on
the T120 myc-tagged constructs.
Topology of AQP1 in Xenopus Oocytes
The cotranslational topology of TM3 was confirmed with the use of
a series of fusion proteins in which the C-terminal P reporter was
engineered into native AQP1 at residues N terminal (R93) or C terminal
(V107, T120, or L139) to TM3. cRNA was coinjected with [35S]methionine into mature XO, and after
2 h, oocytes were homogenized, digested with PK in the presence
and absence of nondenaturing detergent, and immunoprecipitated with
anti-prolactin antiserum. Under these conditions, synthesis of
radiolabeled protein required 60-90 min, and proteolysis was performed
before significant degradation at the time of maximal synthesis while
constructs remained in the ER compartment (Xiong et al.,
1997
; our unpublished results). Each construct generated
nonglycosylated and core-glycosylated protein consistent with previous
studies (Skach et al., 1994
) (Figure
2, lanes 1, 4, 7, and 10; the
glycosylation site at residue N42 is indicated in the diagram).
Glycosylation was verified by endoglycosidase H digestion and/or in
vitro translation in the presence and absence of microsomal membranes
(Skach et al., 1994
; our unpublished results). Protease
digestion revealed that the P reporter was translocated into the ER
lumen (i.e., protected from protease) in >85% of polypeptides when
fused N terminal to TM3 at residue R93. In this construct, glycosylated
and nonglycosylated polypeptides both yielded protease-protected bands
(Figure 2, lanes 1-3). As noted previously (Skach et al.,
1994
), some nascent chains also underwent a cleavage event, presumably
by signal peptidase, to generate an additional protease-protected,
16-kDa peptide fragment. When the P reporter was fused at positions C
terminal to TM3, it was degraded by PK in 85-95% of chains (lanes
4-12). A small amount of protease resistance was observed for these
constructs that could represent either incomplete digestion or
translocation of the reporter in a minor fraction (<15%) of chains.
Together, these data demonstrate that before synthesis of TM4, TM3
initially spans the XO ER membrane in a type I topology with its N
terminus flanking residues in the ER lumen and its C-terminal residues in the cytosol. The location of each fusion site flanking TM3 in the
deduced topology is shown in Figure 2. The initial topology of TM1 and
TM2 is also shown as determined in previous studies (Skach et
al., 1994
).
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We next used myc-tagged plasmids T120.myc.TM3T,
T120.myc.TM4T,
T120.myc.TM5T, and
T120.myc.TM6T (truncated at residues L139, P169,
V214, and V264, respectively) or full-length AQP1.T120.myc to determine
whether TM3 remained in a type I orientation during the remainder of
AQP1 synthesis. Constructs were again labeled with
[35S]methionine in microinjected XO, digested
with PK, and immunoprecipitated with either anti-myc or anti-P
antiserum before SDS-PAGE. As shown in Figure
3A, the myc tag at residue T120 did not
change the initial type I orientation of TM3. Nascent chains were
glycosylated (at residue N42) as indicated, and both the myc and P
reporters remained predominantly in the cytosol and accessible to
protease. After synthesis of TM4 (plasmid
T120.myc.TM4T), the C-terminal P reporter
remained cytosolic and PK accessible (Figure 3B). Immunoprecipitation
with myc antiserum recovered a faint fragment 16 kDa in size (Figure
3B, lane 2). (Fragments were better appreciated upon longer exposure
[our unpublished results].) Although this fragment exhibits only 6%
of the intensity of the starting material in lane 1, it is predicted to
contain 33% of methionine residues encoded within the intact fusion
protein. Two methionine residues likely remain in the AQP1 fragment (M1 and M96). Four methionine residues in the P reporter are digested. (Note the absence of P-reactive fragments in lane 5.) M1 is not removed
by PK because the 17-residue cytosolic N terminus of AQP1 is sterically
inaccessible (Skach et al., 1994
). Therefore, after synthesis of TM4, the myc epitope became protected from protease in a
minor fraction (~20%) of nascent chains.
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For the T120.myc.TM5T construct, truncated at
residue V214, the P reporter was translocated into the ER lumen (Figure
3C). Translocation efficiency of the P reporter varied somewhat between experiments but was ~50% (average of three experiments), consistent with the known signal sequence activity encoded within TM5. This resulted in partial glycosylation of residue N205 in addition to
residue N42 and the appearance of three full-length protein bands
(Figure 3C, lanes 1 and 4), as described previously (Skach et
al., 1994
). Fifteen percent to 20% of nascent chains were
completely resistant to PK digestion in the absence of detergent
(Figure 3C, downward arrowheads). Thus, the myc epitope was
inaccessible in these polypeptides. PK digestion also generated several
myc-reactive, protease-protected fragments (Figure 3C, lane 2, upward
arrowheads). Interestingly, a 30-kDa fragment was reactive to both P
and myc antibodies (Figure 3C, lanes 2 and 5, upward arrowheads).
Because the P reporter is 15 kDa in size, this fragment likely resulted from PK digestion at the N terminus of TM3 (the predicted cleavage site
is diagrammed in Figure 3C). This would remove 10-12 kDa of AQP1
polypeptide and generate a fragment containing the P reporter plus an
additional 15 kDa of glycosylated, myc-tagged AQP1 polypeptide. These
fragments represent 10% of the initial signal and contain five of the
six methionine residues present in full-length chains. A smaller
myc-reactive fragment, 16 kDa in size, was also observed that
represented 2% of the initial signal but contained only 33% of the
initial methionine residues (Figure 3C, lane 2). The presence of these
heterogeneous fragments suggests that several alternative topological
forms exist in the ER membrane at this particular stage of AQP1
biogenesis (Figure 3C). Based on the predicted methionine distribution
in the fusion protein, we calculate that the myc epitope became
protected from protease in 35% of nascent chains immediately after
synthesis of TM5.
Protease digestion of the T120.myc.TM6T construct generated two myc-reactive polypeptide fragments of 29 and 26 kDa (Figure 3D, upward arrowheads). In this case, the shift in size was due to removal of the P reporter and cytosolic AQP1 C-terminal residues in glycosylated and unglycosylated polypeptides, respectively (note the absence of P-protected fragments in Figure 3D, lane 5). Protected fragments represent 16% of the initial band intensity but contain only 33% of the initial methionine residues. Therefore, the myc epitope was protected in 48% of total chains synthesized. Similarly, 49% of chains derived from the full-length AQP1.T120.myc construct also generated a 29-kDa myc-reactive core fragment after PK digestion. This is consistent with PK digestion within the 42-residue AQP1 C-terminal cytosolic domain (Figure 3E). The protected fragments in each of these constructs thus represent the entire hydrophobic core of AQP1, which together with the myc tag and N-linked oligosaccharide has a predicted size of ~29 kDa.
These results indicate that in XO, synthesis of AQP1-TM4, -TM5, and -TM6 was associated with partial reorientation of the TM3-TM4 peptide loop from its initial protease-accessible, cytosolic location to a protease-protected, detergent-sensitive site, presumably in the ER lumen.
In Vitro AQP1 Topology
AQP1 achieves a cotranslational four-spanning topology when
expressed in RRL supplemented with canine pancreas microsomal membranes
(CRM) (Skach et al., 1994
). Therefore, we tested whether AQP1 topological maturation was also reconstituted in vitro. Plasmids T120.myc.TM4T, -TM5T, and
-TM6T and full-length AQP1.T120.myc were
expressed in RRL supplemented with CRM, and reporter topology was
determined by protease digestion and immunoprecipitation (Figure
4A). Each construct generated core-glycosylated protein similar to that observed in XO. In CRM, the P
reporter was completely digested by PK when engineered after TMs 4 and
6 (Figure 4A, lanes 4-6 and 16-18, respectively). When the reporter
followed TM5 (construct T120.myc.TM5T), two
P-reactive fragments were recovered after PK digestion that contained
10% of the signal intensity and two-thirds of the initial methionine
residues (Figure 4A, lanes 10-12). Thus, the reporter was translocated
into the ER lumen by TM5, although reinitiation of translocation
(~15%) was significantly less efficient than in XO. In these chains,
TM5 and TM6 each spanned the membrane in their predicted orientations,
and the TM5-TM6 peptide loop resided in the ER lumen. In contrast to
XO, the myc epitope remained cytosolic and protease accessible in
>90% of all constructs, including full-length AQP1 (compare Figure
4A, lanes 7-9 and 13-15, with Figure 3). These findings demonstrate
that RRL supplemented with CRM failed to reorient the TM3-TM4 peptide
loop and generate a mature six-spanning AQP1 topology. Consistent with
this finding, AQP1.T120.myc also failed to acquire its
protease-resistant core conformation.
|
To understand the basis for the different AQP1 topologies in XO and RRL, we attempted to reconstitute AQP1 maturation with the use of a complementation approach. In this regard, supplementation of RRL with oocyte cytosol and microinjection of CRM containing in vitro synthesized AQP1 constructs into XO did not significantly improve AQP1 maturation efficiency (our unpublished results). However, when AQP1 constructs were expressed in RRL supplemented with XO-derived ER membranes (XOmb), myc-tagged constructs yielded a topology closely resembling that obtained from intact XO (Figure 4B). After synthesis of TM4 (T120.myc.TM4T), the P reporter remained cytosolic, whereas the myc epitope became protected from PK in 27% of nascent chains (Figure 4B, lanes 1-6). (Note that the 16-kDa myc-reactive fragment represents only 9% of the initial signal intensity.) After synthesis of TM5 (T120.myc.TM5T), 16% of nascent chains were again fully protected from protease (Figure 4B, lanes 7-12), and a PK-protected ~30-kDa fragment was recovered that contained both myc and P epitopes. As we had observed in oocytes, the myc epitope was protected from protease in a total of 34% of nascent chains at this stage of synthesis, and this fraction correlated well with the translocation efficiency of the P reporter (31%). Similarly, after synthesis of TM6, the P reporter and the AQP1 C terminus were cytosolic, whereas myc-reactive protease-protected fragments were recovered from 60% of T120.myc.TM6T and 42% of AQP1.T120.myc nascent chains (Figure 4B, lanes 13-15 and 19-21). These data indicate that in XOmb, as in intact XO, reorientation of TM3 begins after synthesis of TM4 and that the efficiency of reorientation increases as additional C-terminal TM segments are synthesized.
In Vivo and In Vitro AQP1 Maturation
To determine whether the incomplete reorientation of TM3 in
microinjected XO and in vitro expression systems represented an inefficient process versus delayed kinetics of maturation, we examined
the topological maturation of full-length myc-tagged AQP1 constructs
with the use of pulse-chase analysis. Two hours after RNA injection
into XO, AQP1.T120.myc was recovered primarily as a core-glycosylated
polypeptide with an apparent size of 33 kDa. PK digestion generated a
29- to 30-kDa myc-reactive fragment that contained 32% of the initial
radioactive signal and 66% of the initial methionine residues. Thus,
48% of newly synthesized AQP1 protein achieved a protease-resistant
conformation immediately after synthesis (Figure
5, A and F). During the chase period, we
observed a small but reproducible increase in both the fraction and the
absolute amount of core-glycosylated AQP1 protein that acquired a
protease-protected conformation. Protease protection of the myc epitope
reached a maximum value of 78% within 5 h of synthesis (average
of three experiments; Figure 5F).
|
In contrast to XO, <10% of AQP1.T120.myc acquired a protease-resistant conformation in RRL supplemented with CRM within 1 h (Figure 5B, lanes 1-3). This fraction increased to only 23% during the 12-h chase (Figure 5B, lanes 4-12, and 5F). For these experiments, CRM were >95% efficient at directing polypeptide translocation, and the integrity of the microsomal membranes remained completely intact during the chase period (Figure 5C). Additional experiments demonstrated that AQP1 maturation efficiency was not significantly altered in RRL when translation and/or incubation was carried out at different temperatures (our unpublished results). In RRL supplemented with XOmb, 34% and 75% of glycosylated AQP1.T120.myc acquired a protease-resistant conformation within 1 and 12 h, respectively (Figure 5, D and F). RRL supplemented with XOmb thus exhibited similar efficiency in promoting AQP1 topological maturation as intact oocytes. Translocation was also efficient in XOmb, and membrane integrity was maintained during the entire incubation period (Figure 5E). Thus, failure of AQP1 to mature in CRM was not simply an artifact of the in vitro RRL system but rather reflected specific properties of ER-derived microsomal membranes. Importantly, the efficiency of different ER membranes to direct translocation did not appear to predict their ability to reconstitute additional events required for AQP1 topological maturation.
To rule out the possibility that the increase in myc epitope protection might be due to a relative instability of the four-spanning structure, total AQP1 protein was quantitated for each time point (Figure 5G). In each system, a gradual loss of protein was noted. However, degradation was slow and occurred over a period that would not explain the observed change in topology. In both XO and XOmb, >90% of AQP1 was present 5 h after synthesis, at a time when reorientation was nearly complete.
Immunoadsorption of AQP1 in ER-derived Membranes
To further confirm that the T120-myc epitope was translocated into
the ER lumen during in vitro AQP1 maturation, we tested the cytosolic
accessibility of the myc epitope with the use of a nonproteolytic
immunoadsorption assay (Figure 6).
Full-length AQP1 constructs, AQP1.T120.myc, and a control protein
encoding an N-terminal myc tag (myc.AQP1) were expressed in RRL
supplemented with CRM or XOmb. Microsomes were incubated in the
presence or absence of anti-myc antibody and pelleted through a sucrose
cushion. Protein recovered by adsorbed antibody was then compared with protein recovered by immunoprecipitation after detergent
solubilization. Immunoadsorption of the control protein containing an
N-terminal myc epitope was >50% in both CRM and XOmb (Figure 6, A and
C). This result is consistent with the established cytosolic
orientation of the N terminus (Smith and Agre, 1991
; Skach et
al., 1994
) and demonstrates that the myc tag on membrane-bound
protein is accessible to cytosolic antibody. Less than 10% of
immunoprecipitated protein was recovered by immunoadsorption when the
myc epitope was located in the ER lumen (at residue P77; our
unpublished results). In CRM, the immunoadsorption efficiency of the
AQP1.T120.myc construct was 55 and 45% within 1 and 8 h of
translation, respectively, indicating that the myc epitope at residue
T120 remained predominantly accessible from the cytosol, as would be
expected in the four-spanning topology illustrated in Figure 1. In
XOmb, however, the efficiency of immunoadsorption was initially only
23%, and this decreased to 13% after 8 h of incubation,
consistent with repositioning of the myc epitope into an inaccessible,
lumenal location (Figure 6, B and C). More than 80% of total AQP1
protein was recovered within the 8-h incubation period. These findings
support conclusions from proteolysis experiments that XOmb, but not
CRM, efficiently reconstitute translocation of the T120-myc epitope
into the ER lumen.
|
Topological Reorientation of TM3 Involves Retrograde Translocation of N-terminal Flanking Residues
If AQP1 were converted from its four-spanning to its six-spanning topology by a 180-degree rotation of TM3, then as TM3 C-terminal residues translocated into the ER lumen, TM3 N-terminal residues would be predicted to move from the ER lumen to the cytosol. We tested this hypothesis using the AQP1.P77.myc construct. Studies of sequentially truncated P77 myc constructs indicated that the myc tag did not significantly alter the cotranslational activities of downstream topogenic determinants encoded within TMs 4, 5, and 6 (our unpublished results). However, as noted above, these constructs were poorly expressed in XO. Therefore, we determined their topology in RRL supplemented with either CRM or XOmb.
PK digestion of the full-length AQP1.P77.myc construct resulted in the
appearance of two protease-protected, myc-reactive fragments (Figure
7A). The size of the larger 19-kDa
fragment (corrected for the myc epitope) corresponded precisely with
the translocated and glycosylated N-terminal peptide loop previously shown to contain TM1, TM2, and TM3 in the four-spanning AQP1 topology (Skach et al., 1994
). After adjusting for methionine
content, the average translocation efficiency of the myc epitope in
full-length glycosylated chains was 53% in CRM (n = 6) and 33%
in XOmb (n = 4) (Figure 7B). In addition, the myc epitope became
progressively more accessible to PK in XOmb after translation (87%
accessible after 14 h), whereas accessibility remained essentially
unchanged in CRM. No significant difference in AQP1 stability was
observed between different membrane preparations (Figure 7C). The
efficiency and kinetics of reorientation differed somewhat from the
T120.myc-tagged constructs. This may be due to other effects of the myc
tag on AQP1 folding, because AQP1.P77.myc does not form functional
water channels. Together with data from the T120 myc constructs, these findings support a model in which AQP1 topological maturation involves
a coordinated repositioning of TM3 N-terminal and C-terminal flanking
residues to opposite sides of the ER membrane.
|
| |
DISCUSSION |
|---|
|
|
|---|
It is generally accepted that the topology of most eukaryotic
polytopic proteins is established cotranslationally at the ER membrane
and once established is maintained during subsequent steps of
processing and intracellular trafficking. The current study provides an
exception to this rule and demonstrates that initial cotranslational
topology at the ER membrane is dynamic and may be modified by
subsequent folding events. Specifically, AQP1 maturation proceeds
through a complex pathway that involves posttranslational reorientation
of three internal TM segments and two connecting peptide loops. Initial
translocation events are cotranslationally directed by sequential
signal and stop-transfer sequences and give rise to a loosely folded,
protease-sensitive, four-spanning structure (Skach et al.,
1994
). During subsequent maturation, TM3 C-terminal flanking residues
are posttranslationally reoriented from an initial PK-accessible
location in the cytosol to a PK-protected location in the ER lumen.
Concurrently, TM3 N-terminal flanking residues undergo a retrograde
translocation from the ER lumen to the cytosol. We propose that these
events are associated with a 180-degree rotation of TM3 into its mature type II topology and a repositioning of TM2 and TM4 within the plane of
the membrane to generate the predicted six-spanning AQP1 structure, as
diagrammed in Figure 1. Although TM3 reorientation was initially
detected after synthesis of TM4 and TM5, the efficiency of
reorientation was significantly enhanced after synthesis of all six TM
segments. In intact XO and in XOmb, AQP1 maturation was also associated
with the acquisition of a protease-resistant core structure, suggesting
that TM3 reorientation was accompanied by compaction of TM helices
and/or cytosolic peptide loops in the final mature and functional protein.
These findings have significant implications for the molecular
mechanisms by which polytopic proteins acquire their topology in the ER
membrane. During eukaryotic protein synthesis, the immediate (i.e.,
cotranslational) topological fate of the nascent chain is primarily
dependent on two factors: binding of ribosomes to the ER membrane, and
the gated state of the Sec61 translocation channel (Crowley et
al., 1994
; Do et al., 1996
; Liao et al.,
1997
; Mothes et al., 1997
). As the nascent chain exits the
ribosome, it either moves through the translocation channel toward the
ER lumen or exits the ribosome in direct contact with the cytosol (Crowley et al., 1994
; Jungnickel and Rapoport, 1995
; Liao
et al., 1997
; Hamman et al., 1998
). By precisely
regulating the state of ribosome binding and translocon gating, signal
and stop-transfer sequences in polytopic proteins are able to control
the environment encountered by the growing nascent chain and establish
polytopic protein topology in a cotranslational manner (Bibi, 1998
).
Initial events of AQP1 biogenesis, therefore, are partially explained by the action of signal sequence activities encoded within TM1 and TM5
and stop-transfer activities encoded within TM3 and TM6 (Skach et
al., 1994
). The surprising outcome here is that AQP1 acquires only
four membrane-spanning segments through these cotranslational events
(Skach et al., 1994
). In particular, TM2 is unable to
terminate translocation (Skach et al., 1994
) and transiently
resides within the ER lumen, whereas TM3 terminates translocation and
initially spans the membrane in an orientation opposite that observed
in the mature protein (Preston et al., 1994
).
AQP1 maturation, therefore, requires a novel mechanism for reorienting
TM segments (e.g., TM3) that have achieved an intermediate transmembrane topology. It is possible that TM3 reorientation could
occur after the nascent chain has been released from the translocon and
during helical packing (Popot and Engelman, 1990
). Such a process seems
unlikely, however, because it would require that polar and charged
residues traverse the hydrophobic environment of the membrane. Rather,
AQP1 topological maturation appears to be initiated while the nascent
chain is still associated with the Sec61 translocation machinery and/or
other ER proteins. In this regard, carbonate extraction experiments
have indicated that the nascent AQP1 chain is unable to integrate
stably into the ER membrane until at least three TM segments have been
synthesized (Skach et al., 1994
). In the current study, TM3
reorientation appears to begin even before AQP1 synthesis is completed,
at a time when the ribosome would be expected to remain bound to Sec61 (Borel and Simon, 1996
; Mothes et al., 1997
). This finding
is consistent with the large internal diameter of the translocon pore
(20-60 Å) (Hanein et al., 1996
; Hamman et al.,
1997
) as well as with recent studies suggesting that TM segments may
accumulate within or near the translocon before entering the lipid
bilayer (Skach and Lingappa, 1993
; Lin and Addison, 1995
; Borel and
Simon, 1996
; Mothes et al., 1997
). It is thus possible that
ER translocation machinery might potentially hold AQP1 N-terminal TM
segments in an intermediate folded state until synthesis of downstream
TM segments provides sufficient information to allow the completion of
folding and membrane integration of all helices (Hegde and Lingappa,
1997
). The absence of this downstream folding information could explain
why truncated constructs such as T120.myc.TM5T
inefficiently acquired a protease-resistant core conformation and
exhibited multiple intermediate topological forms.
The possibility that translocon-associated proteins might play an active role in facilitating polytopic protein folding raises several questions. How might the exit of TM segments from the translocon be monitored and regulated during polytopic protein biogenesis? How would the accumulation of TM helices affect or be affected by translocon gating? And how might retrograde and anterograde translocation of peptide segments be facilitated? Further studies examining the molecular environment of individual TM helices at specific stages of biogenesis will be required to address these issues.
C-terminal translocation reporters have been widely used to study
polytopic protein topology and rely on the ability of upstream topogenic information to accurately direct the topology of downstream polypeptide segments (Traxler et al., 1993
). Moreover, this
technique assumes that the initial topology of a protein in the ER
membrane accurately reflects the topology of the protein elsewhere in
the cell. Based on this premise, we previously proposed that the
four-spanning AQP1 topology might represent a functional water channel
unit (Skach et al., 1994
). It appears, however, that this
four-spanning structure is actually a folding intermediate of AQP1
maturation. Thus, although the C-terminal reporter technique provides
valuable insight into the process of protein biogenesis, it may or may not accurately predict final topology depending on whether
posttranslational topological modifications occur. It should be noted
that translocation events can also be influenced by both the presence
of the reporter and the choice of the fusion site. To reduce this
possibility, we have used a reporter domain that faithfully and
passively follows a wide variety of heterologous topogenic signals
(Rothman et al., 1988
; Chavez and Hall, 1992
). Moreover,
examination of homologous fusion proteins derived from a closely
related aquaporin, AQP4, and use of the same reporter and similar
fusion sites suggest that specific structural information within TM2
and TM3 is responsible for the unusual biogenesis pathway observed for
AQP1 (Shi et al., 1995
).
A growing number of eukaryotic proteins have recently
been recognized to exhibit variations in cotranslational biogenesis pathways. Frequently, these variations involve local interactions between adjacent topogenic determinants. For example, C-terminal TM
segments have been observed to facilitate the translocation and
positioning of adjacent N-terminal TM segments, particularly those TM
segments that are relatively short or that contain charged residues
(Calamia and Manoil, 1992
; Wilkinson et al., 1996
; Bayle et al., 1997
; Lu et al., 1997
; Schmidt-Rose and
Jentsch, 1997
; Ota et al., 1998
). In the case of AQP1,
topological maturation involves more global aspects of protein folding
in which distal structural elements influence anterograde as well as
retrograde translocation events. AQP1 biogenesis thus resembles that of
Sec61p, in which the C-terminal half of the protein was required to
facilitate the proper transmembrane orientation of the N-terminal half
(Wilkinson et al., 1996
). Noncotranslational biogenesis
pathways, therefore, may explain in part why different topological
models have been obtained when the results of C-terminal reporters are
compared with other analytical techniques (Adachi et al.,
1994
; Doan et al., 1996
; Schmidt-Rose and Jentsch, 1997
; Li
and Greenwald, 1998
; Nakai et al., 1999
).
It is important to note that some aspects of protein topology may be
expression system dependent. Canine pancreatic microsomes were
remarkably inefficient at reconstituting TM3 reorientation, even though
they were nearly 100% efficient at directing translocation of a
secretory protein. In contrast, AQP1 topological maturation was
efficiently observed in both intact XO and oocyte-derived ER membranes.
A similar result was reported previously by Kobilka (1990)
, who found
that XOmb but not CRM were able to confer substrate-binding properties
and protease resistance to in vitro translated
-adrenergic receptor.
One intriguing possibility is that certain polytopic proteins may
require specialized components to achieve their proper topology in
addition to the basic components needed for protein translocation
(Hegde et al., 1998
; Hegde and Lingappa, 1999
). Differences
between CRM and XOmb in mediating AQP1 maturation, therefore, might
reflect different amounts of translocation-associated factors in
different cell types. It is also possible that differences in AQP1
maturation are due to different techniques of membrane preparation or,
alternatively, other aspects of biogenesis, such as tetramerization
(Smith and Agre, 1991
; Ma et al., 1993
). Finally, although
oocytes efficiently generate functional aquaporins, it is unclear
whether AQP biogenesis in mammalian cells might exhibit yet additional
folding variations. Further studies defining how diferent ER membrane
preparations mediate AQP1 maturation will undoubtedly provide insight
into these unique aspects of polytopic protein biogenesis.
| |
ACKNOWLEDGMENTS |
|---|
The authors are grateful to members of the Skach laboratory for helpful discussions and critical comments on the manuscript, and to K. Moss for technical assistance. This work was supported by National Institutes of Health grants GM 53457 and DK51818. W.R.S. is an established investigator of the American Heart Association.
| |
FOOTNOTES |
|---|
Present address: Genetics and Biochemistry
Branch, National Institutes of Health, Bethesda, MD 20892.
Corresponding author. E-mail address:
skachw{at}ohsu.edu.
| |
ABBREVIATIONS |
|---|
Abbreviations used: AQP, aquaporin; CRM, canine rough microsomes; ER, endoplasmic reticulum; PK, proteinase K; RRL, rabbit reticulocyte lysate; TM, transmembrane; XO, Xenopus laevis oocytes; XOmb, Xenopus oocyte-derived ER membranes.
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REFERENCES |
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