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Vol. 12, Issue 6, 1645-1669, June 2001



*Department of Molecular and Cell Biology, Division of Biochemistry and Molecular Biology, and §Electron Microscopy Laboratory, University of California, Berkeley, California 94720
Submitted January 5, 2001; Revised March 14, 2001; Accepted March 27, 2001| |
ABSTRACT |
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In Saccharomyces cerevisiae, entry into
mitosis requires activation of the cyclin-dependent kinase Cdc28
in its cyclin B (Clb)-associated form. Clb-bound Cdc28 is susceptible
to inhibitory tyrosine phosphorylation by Swe1 protein kinase. Swe1 is
itself negatively regulated by Hsl1, a Nim1-related protein kinase, and
by Hsl7, a presumptive protein-arginine methyltransferase. In vivo all
three proteins localize to the bud neck in a septin-dependent manner,
consistent with our previous proposal that formation of Hsl1-Hsl7-Swe1
complexes constitutes a checkpoint that monitors septin assembly. We
show here that Hsl7 is phosphorylated by Hsl1 in immune-complex kinase assays and can physically associate in vitro with either Hsl1 or Swe1
in the absence of any other yeast proteins. With the use of both the
two-hybrid method and in vitro binding assays, we found that Hsl7
contains distinct binding sites for Hsl1 and Swe1. A differential
interaction trap approach was used to isolate four single-site
substitution mutations in Hsl7, which cluster within a discrete region
of its N-terminal domain, that are specifically defective in binding
Hsl1. When expressed in hsl7
cells, each of these
Hsl7 point mutants is unable to localize at the bud neck and cannot
mediate down-regulation of Swe1, but retains other functions of Hsl7,
including oligomerization and association with Swe1. GFP-fusions of
these Hsl1-binding defective Hsl7 proteins localize as a bright
perinuclear dot, but never localize to the bud neck; likewise, in
hsl1
cells, a GFP-fusion to wild-type Hsl7 or native
Hsl7 localizes to this dot. Cell synchronization studies showed that,
normally, Hsl7 localizes to the dot, but only in cells in the G1 phase
of the cell cycle. Immunofluorescence analysis and immunoelectron
microscopy established that the dot corresponds to the outer plaque of
the spindle pole body (SPB). These data demonstrate that association
between Hsl1 and Hsl7 at the bud neck is required to alleviate
Swe1-imposed G2-M delay. Hsl7 localization at the SPB during G1 may
play some additional role in fine-tuning the coordination between
nuclear and cortical events before mitosis.
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INTRODUCTION |
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Successful division of a eukaryotic cell requires that the events
of the cell cycle be properly integrated, both temporally and
spatially. To ensure accurate coordination of these processes, eukaryotic cells use specific mechanisms, known as checkpoint pathways,
that monitor proper completion of each stage of the cell cycle and can
pause cell cycle progression, when necessary, to allow for execution of
an unfinished step, correction of errors, or repair of damage. In
budding yeast, Saccharomyces cerevisiae, checkpoint pathways
have been described that delay or block mitosis in response to defects
in DNA replication or damage to DNA (Longhese et al., 1998
;
Rhind and Russell, 1998
) or in response to defects in spindle assembly
or dynamics (Amon, 1999
; Burke, 2000
). In addition to proper
replication and segregation of chromosomes, cell division in S. cerevisiae also requires formation and enlargement of the bud
(Madden and Snyder, 1998
; Chant, 1999
). Bud emergence begins early in
the cell cycle and bud growth continues until the incipient daughter
cell is of the correct size and shape to accept its share of the
duplicated chromosomes and its apportionment of organelles and other
cellular contents during mitosis. Bud growth, and the cell cycle
itself, terminates upon cytokinesis (Balasubramanian et al.,
2000
; Lippincott and Li, 2000
). Although bud formation, bud
development, and septation require the actin cytoskeleton, these
processes also rely on assembly of a second cytoskeletal structure: the
septin filaments (Trimble, 1999
). Defects or perturbations in either
actin or septin assembly cause a G2 delay (McMillan et al.,
1998
; Barral et al., 1999
), and recent studies provide
further evidence for checkpoint mechanisms that monitor assembly of the
actin cytoskeleton and the septin filaments (Shulewitz et
al., 1999
; Lew, 2000
).
The septins, a conserved family of GTP-binding proteins (Cooper and
Kiehart, 1996
; Field and Kellogg, 1999
), assemble into cytoplasmic
10-nm filaments that immediately subtend the plasma membrane at the
neck between a bud and its mother cell (Byers and Goetsch, 1976
) and
are required for both cytokinesis and maintenance of proper bud shape
(Hartwell, 1971
; Longtine et al., 1996
; Barral et
al., 2000
). The septin filaments of mitotic cells are composed of
five gene products: Cdc3, Cdc10, Cdc11, Cdc12, and Sep7/Shs1 (Frazier
et al., 1998
; Mino et al., 1998
). As observed by
immunofluorescence, the septin filaments appear as an hourglass-like or
double-ring structure spanning the isthmus between a mother cell and
its bud. The requirement for septin function in cytokinesis is not well understood, but it has been proposed that the septin filaments serve as
a scaffold for recruitment and/or organization of other components that
play a more direct role in septation (DeMarini et al., 1997
;
Lippincott and Li, 1998
).
In S. cerevisiae, major events of the cell cycle are
initiated by the cyclin-dependent protein kinase (CDK) Cdc28. Entry
into mitosis requires association of Cdc28 with B-type cyclins (Clb1, Clb2, Clb3, and Clb4) (Fitch et al., 1992
; Nasmyth, 1993
).
Clb-bound Cdc28 is susceptible to inhibitory phosphorylation on a
conserved residue (Tyr 19) in its ATP-binding loop by another protein
kinase, Swe1. Swe1-mediated Tyr phosphorylation of Cdc28-Clb complexes blocks entry into mitosis (Booher et al., 1993
) and must be
reversed by the phosphoprotein phosphatase Mih1 (Russell et
al., 1989
). Because the G2 delay provoked by perturbation of the
septin checkpoint is eliminated by the absence of Swe1 (Barral et
al., 1999
) or by substitution of normal Cdc28 by a Cdc28(Y19F)
variant (Shulewitz et al., 1999
), the sole cause of the G2
delay appears to be inhibition of Cdc28-Clb complexes by Swe1-dependent
phosphorylation at Tyr 19.
Swe1 (819 residues) is subject to negative regulation by two proteins,
Hsl1 and Hsl7 (Ma et al., 1996
). Hsl1 (1518 residues) is a
protein kinase, whose catalytic domain is homologous to
Schizosaccharomyces pombe Nim1 (Russell and Nurse, 1987
).
Hsl7 (827 residues) contains a central region similar to catalytic
domains of known S-adenosylmethionine-dependent protein-arginine
methyltransferases (Pollack et al., 1999
; Ma, 2000
) and
purportedly possesses this activity (Frankel and Clarke, 2000
; Lee
et al., 2000
). We have shown previously that Hsl7 interacts with both Hsl1 and Swe1, as judged by the two-hybrid method and by
coimmunoprecipitation from cell extracts (Shulewitz et al., 1999
), suggesting that these proteins function in a complex. This conclusion is supported by the fact that Hsl7 and Hsl1 colocalize at
the bud neck during most of the cell cycle and require septin function
for this localization (Barral et al., 1999
; Shulewitz et al., 1999
; Longtine et al., 2000
). Septins can
be coimmunoprecipitated by Hsl1, but not by Hsl7 (Barral et
al., 1999
; Shulewitz et al., 1999
), suggesting that
Hsl1 associates directly with the septin filaments and acts as a tether
to localize Hsl7. In agreement with this conclusion, localization of
Hsl7 to the bud neck is dependent upon Hsl1, whereas Hsl1 localizes to
the bud neck even in the absence of Hsl7 (Barral et al.,
1999
; Shulewitz et al., 1999
; Longtine et al.,
2000
). In turn, efficient accumulation of Swe1 at the neck is
reportedly dependent upon Hsl1 and Hsl7 (Longtine et al.,
2000
). Targeting of Swe1 for modification (Shulewitz et al.,
1999
) and its subsequent ubiquitin-mediated degradation (Kaiser
et al., 1998
) require Hsl1 and Hsl7 (McMillan et
al., 1999
). Collectively, these observations suggest that
assembled septins serve as a platform for formation of Hsl1-Hsl7
complexes, which, in turn, mediate the inactivation and destruction of
Swe1, thereby alleviating inhibition of Cdc28-Clb complexes and
permitting efficient entry into mitosis (Shulewitz et al.,
1999
).
Interestingly, it has been reported (Lim et al., 1996
) that
overexpression of SWE1, or a Cdc28 mutant, Cdc28(Y19E), that
presumably mimics permanent Swe1-dependent Tyr phosphorylation prevents
separation and/or migration of duplicated spindle pole bodies (SPBs),
an event that is a necessary prelude to formation of a short premitotic spindle and that normally occurs in synchrony with the switch from
polarized to isotopic bud growth (Lew and Reed, 1993
). This observation
suggests that, in addition to regulation of Cdc28-Clb function for
proper timing of the entry into mitosis, Swe1-dependent control of
Cdc28-Clb may also be involved in coordinating spindle dynamics at a
premitotic stage.
To gain further understanding into how Hsl1 and Hsl7 action contribute to down-regulation of Swe1, we mapped the region of Hsl7 that mediates its interaction with Hsl1 and examined the effect of mutations in this region on the subcellular localization and function of Hsl7. The behavior of these mutants led to our discovery that Hsl7 localizes to the SPB during early stages of the cell cycle before becoming redistributed to the bud neck. This dynamic movement suggests that Hsl7 may participate in localized depletion of Swe1 (or additional targets) in the vicinity of the SPB well in advance of the Hsl1-Hsl7 promoted- and septin-dependent destruction of Swe1 that precedes the entry into mitosis.
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MATERIALS AND METHODS |
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Strains and Growth Conditions
Yeast strains used in this study are listed in Table
1. Standard rich (YP) and defined minimal
(SC) media (Sherman et al., 1986
), containing either 2%
glucose (Glc), 2% raffinose (Raf), or 2% galactose (Gal) as the
carbon source and supplemented with appropriate nutrients to maintain
selection for plasmids, were used for yeast cultivation. To impose
pheromone-induced G1 arrest, MATa haploids
carrying a bar1 allele (sst1-3), which enhances sensitivity to
-factor, were treated with 50 ng/ml (final
concentration)
-factor for 3 h at 28°C. Latrunculin A
(Molecular Probes, Eugene, OR), cycloheximide (Calbiochem, San Diego,
CA), and Benomyl (DuPont, Wilmington, DE) were used at the
concentrations indicated.
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Plasmids and Recombinant DNA Methods
Plasmids used in this study are listed in Table
2. These plasmids were constructed
according to standard procedures (Sambrook et al., 1989
)
with the use of Escherichia coli DH5
(Hanahan, 1983
) for
plasmid propagation. For all DNA amplifications using the polymerase
chain reaction (PCR), either PfuI DNA polymerase (Stratagene, La Jolla, CA) or Turbo PfuI DNA polymerase
(Stratagene) was used, unless otherwise noted.
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To express an in-frame fusion of Hsl7 to the Gal4 DNA-binding domain
[Gal4(DBD)] from a low copy (CEN) plasmid, a 1.2-kb
EcoRV-NsiI fragment was excised from pAS1-HSL7
(Shulewitz et al., 1999
) and inserted into YCpT-HSL7
(Shulewitz et al., 1999
) that had been cleaved with
SmaI and NsiI, yielding YCpT-ADHp-GAL4(DBD)-HSL7.
A C-terminally truncated version of Hsl7 (residues 1-685), fused to
the C terminus of the green fluorescent protein (GFP) and expressed
from the native HSL7 promoter on a CEN plasmid, was constructed as follows. First, PCR with appropriate primers and
GFP(F64L S65T)-Hsl7 DNA (Shulewitz et al., 1999
) as the
template was used to generate a fragment containing at its 5' end the
sequence 5'-CTG CAG AAA GGA-3' (PstI
site is underlined) and at its 3' end the sequence 5'-ATG TTG
TAA TCT AGA-3' (XbaI site
is underlined; stop codon in bold). Second, this PCR product was cleaved with PstI and XbaI and ligated into
plasmid YCpT-HSL7 (Shulewitz et al., 1999
) that was cleaved
with NsiI and XbaI (in YCpT-HSL7, a naturally
occurring NsiI cleavage site is present at codon 2 of the
HSL7 coding sequence and a naturally occurring XbaI cleavage site is present between codons 746 and 747).
This operation resulted in a NsiI/PstI hybrid
junction that reconstructed the initiator codon for GFP, but
simultaneously eliminated the NsiI site at this position in
GFP. The resulting plasmid, which retains the NsiI site at
the junction between the GFP and HSL7 coding sequence, was
designated YCpT-GFP-HSL7(1-685). To produce plasmids expressing each
of the Hsl1-binding-defective hsl7 alleles as GFP-fusions,
the NsiI-XbaI fragment from each mutant DNA was excised from the corresponding YCpT-ADHp-GAL4(DBD)-HSL7 derivative and
inserted into YCpT-GFP-HSL7(1-685) in place of the sequence encoding
Hsl7(1-685), which had been excised by digestion with NsiI
and XbaI. The resulting plasmids (in which the intact
HSL7 open reading frame was reconstructed) were designated
YCpT-GFP-HSL7(V251A), YCpT-GFP-HSL7(P250Y), YCpT-GFP-HSL7(K254E), and
YCpT-GFP-HSL7(F242L). To produce plasmids expressing each of the same
hsl7 alleles from the HSL7 promoter on a
CEN plasmid, a 0.6-kb BamHI-EcoRV
fragment excised from YCpT-HSL7 (Shulewitz et al., 1999
) and
a 3.0-kb EcoRV-HindIII fragment of each mutant
DNA, excised from the corresponding YCpT-ADHp-GAL4(DBD)-HSL7 isolate,
were ligated together into YCplac111 (Gietz and Sugnino, 1988
) cleaved
with BamHI and HindIII. The resulting plasmids
were designated YCpL-HSL7(V251A), YCpL-HSL7(P250Y), YCpL-HSL7(K254E), and YCpL-HSL7(F242L). To express wild-type HSL7 from the
same plasmid (CEN LEU2), a 3.6-kb
BamHI-HindIII fragment excised from YCpT-HSL7 was
ligated into the corresponding sites in YCplac111, yielding YCpL-HSL7.
To express residues 833-1518 of Hsl1 as a fusion to glutathione
S-transferase (GST) in Escherichia coli, first, a
3.3-kb StuI-SacI fragment was excised from pE14R1
(Ma et al., 1996
) and inserted into the vector Litmus28 (New
England Biolabs, Beverly, MA) that was cleaved with StuI and
SacI. A 2.3-kb EcoRV fragment excised from the
resulting plasmid was inserted into pGEX-3X (Amersham Pharmacia
Biotech, Piscataway, NJ) that was cleaved with SmaI, yielding pGEX-HSL1(833-1518). To express a derivative of
Hsl1(1021-1518)-(HA)3 (Shulewitz et
al., 1999
) in which a 237-residue segment (1245-1481) was
removed by an in-frame deletion,
YCpLG-HSL1(1021-1518)-(HA)3 was cleaved with
NsiI and religated, yielding YCpLG-HSL1(1021-1244; 1482-1518)-(HA)3. To express essentially the
same polypeptide as a GST fusion in E. coli, a 800-bp
BamHI fragment excised from YCpLG-HSL1(1021-1244;
1482-1518)-(HA)3 was inserted into the
corresponding site of pGEX-4T-1 (Amersham Pharmacia Biotech),
generating pGEX-GST-HSL1(1018-1244; 1482-1518).
To express Swe1 as a GST fusion in E. coli, YCpLG-MycSwe1
(Shulewitz et al., 1999
) was first cleaved with
BamHI and SalI followed by incubation with T4 DNA
polymerase to create blunt sites. The resulting flush-ended 2.5-kb
fragment was inserted into pGEX-3X (Amersham Pharmacia Biotech) that
was cleaved with SmaI, yielding pGEX-SWE1. To express an
86-residue segment (284-369) of Swe1 as a GST fusion in E. coli, PCR was used with appropriate primers to generate a 5'
NsiI site and a 3' stop codon followed by an XbaI
site. The resulting product, containing at its 5' end the sequence
5'-ATG CAT TCT CCC-3' (NsiI site
underlined) and at its 3' end the sequence 5'-GAA TAG
ATC TAG ACT-3' (XbaI
site underlined; stop codon in bold), was cleaved with NsiI
and XbaI and inserted into pGEX-HSL7 from which the
HSL7 sequence had been removed by cleavage with
NsiI and XbaI, yielding pGEX-SWE1(284-369).
To produce a plasmid for production of radiolabeled full-length Hsl7 by
coupled in vitro transcription (from the SP6 promoter) and translation,
a 2.5-kb NdeI-PstI fragment from pAS1-HSL7
(Shulewitz et al., 1999
) was inserted into pGEM-5Z (Promega,
Madison, WI) that was cleaved with NdeI and PstI,
yielding pGEM-5Z-HSL7. To produce plasmids for production of
radiolabeled fragments of Hsl7 by coupled in vitro transcription (from
the T7 promoter) and translation, PCR was used with appropriate primers
to generate products in which the desired region of the HSL7
coding sequence was flanked at its 5' end by an NcoI site
and at its 3' end by either a BamHI or a HindIII
site. For Hsl7(1-246), the PCR product contained at its 5' end the
sequence 5'-CCC ATG GAT
AGC-3' (NcoI site underlined; start codon in bold), and at
its 3'-end, 5'-CAG TAG
GAT CCT-3' (BamHI site underlined;
stop codon in bold). For Hsl7(88-544), the PCR product contained at
its 5' end 5'-CCC ATG
GTC-3' (NcoI site underlined; start codon in
bold) and at its 3' end, 5'-TTC TAG
GAT CCC-3' (BamHI site underlined;
stop codon in bold). For Hsl7(1-246) and Hsl7(88-544), the PCR
products were cleaved with NcoI and BamHI and
inserted into pBAT4 (Peranen et al., 1996
) that had been
cleaved with NcoI and BamHI, yielding
pBAT4HSL7(1-246) and pBAT4-HSL7(88-544), respectively. For
Hsl7(168-345), the PCR product was cleaved with NcoI and
HindIII and inserted into pBAT4 that had been cleaved with
NcoI and HindIII, yielding pBAT4-HSL7(168-345).
For Hsl7(316-636), a 1-kb BamHI fragment was excised from
YEpLG-GST-HSL7(316-636) (see below) and inserted into the
corresponding site of pBAT4, yielding pBAT4-HSL1(316-636).
To express Hsl7(224-827) as a fusion to Gal4(DBD), PCR was used
with appropriate primers to generate a fragment containing at its 5'
end the sequence 5'-CG CAT ATG
CTG-3' (NdeI site underlined, start codon in bold) and the
naturally occurring XbaI site in HSL7 at its 3'
end. The resulting product was cleaved with NdeI and
XbaI and inserted into YCpT-ADHp-GAL4(DBD)-HSL7 that was
cleaved with NdeI and XbaI, yielding
YCpT-ADHp-GAL4(DBD)-HSL7(224-827). To generate plasmids expressing
Hsl7(284-827), Hsl7(352-827), and Hsl7(1-533) as fusions to the
Gal4(DBD), a similar PCR strategy was used with appropriate primers,
except that the site at the 5' end was NsiI: Hsl7(284-827),
5'-GGG ATG CAT AAA TAT GCC-3'
(NsiI site underlined; start codon in bold), naturally occurring 3' XbaI site; Hsl7(352-827), 5'-GAA
ATG CAT TTG GTG-3', naturally occurring 3'
XbaI site; and Hsl7(1-533), naturally occurring 5'
NsiI site, 5'-TGT ATA TAA TCC TCT
AGA GAT-3' (XbaI site underlined, stop codon in
bold). To produce Gal4(DBD)-Hsl7(
224-392), a similar PCR approach
with appropriate primers was used to delete codons 224-392, yielding a
fragment with the sequence 5'-TCG TAT GTG GAT
CGA ACT-3' (codon 223 in bold, codon 393 underlined). All four
fragments were cleaved with NsiI and XbaI
and inserted into YCpT-ADHp-GAL4(DBD)-HSL7 that had been cleaved with
NsiI and XbaI, yielding, respectively,
YCpT-ADHp-GAL4(DBD)-HSL7(284-827), YCpT-ADHp-GAL4(DBD)-HSL7(352-827),
YCpT-ADHp-GAL4(DBD)-HSL7(1-533), and
YCpT-ADHp-GAL4(DBD)-HSL7(
224-392).
To express a catalytically inactive Hsl1 mutant (K110R) tagged at its C
terminus with a triple influenza virus hemagglutinin (HA) epitope from
the GAL1 promoter on a CEN plasmid, PCR was used
with appropriate primers to substitute the AAA (Lys) at
codon 110 with CGT (Arg) and to introduce an
SnaBI site at this position. The resulting fragment,
containing the sequence 5'-ATA CGT ATT-3' (SnaBI site underlined, codon 110 in
bold), was cleaved with NcoI and inserted into
YCpLG-HSL1(HA)3 (Shulewitz et al., 1999
) that was cleaved with NcoI, yielding
YCpLG-HSL1-K110R(HA)3.
To express Hsl7(1-685) as a GST fusion in yeast, PCR was used with
appropriate primers and YCpT-GFP-HSL7(1-685) as the template to
generate a fragment with a BamHI site upstream of and
immediately adjacent to the initiator codon for the HSL7
codon sequence (5'-GGA TCC ATG
CAT-3'; BamHI site underlined, start codon in bold). The
resulting product was cleaved with BamHI and XbaI
as inserted into YEpLG-GST-HSL7 (Shulewitz et al., 1999
)
that was cleaved with BamHI and XbaI, yielding
YEpLG-GST-HSL7(1-685). To express Hsl7(1-246) as a GST fusion in
yeast, a 750-bp NcoI-HindIII fragment excised
from pBAT4-HSL7(1-246) was inserted into YEpLG-GST (Shulewitz et
al., 1999
) that was cleaved with NcoI and
HindIII, yielding YEpLG-GST-HSL7(1-246). To express
Hsl7(316-636) as a GST fusion in yeast, PCR was used with appropriate
primers to generate a fragment containing a BamHI site at
its 5' end and a stop codon after codon 636. The resulting fragment,
containing at its 5' end the sequence 5'-ATT GGA
TCC AAT-3' (BamHI site underlined) and at its 3'
end the sequence 5'-TCG TGA TCT AGA AAT-3' (stop codon in
bold), was inserted into Litmus28 that was cleaved with
EcoRV. A 1.0-kb BamHI fragment excised from the
resulting plasmid was inserted into YEpLG-GST (Shulewitz et
al., 1999
) that was cleaved with BamHI and treated with
alkaline phosphatase, yielding YEpLG-GST-HSL7(316-636).
To express Hsl7(674-827), Hsl7(674-736), Hsl7(737-827), and Hsl7(771-827) as GST fusions in bacteria, corresponding fragments were generated by PCR with the use of appropriate primers. Each fragment contained a BamHI site at its 5' end for in-frame fusion to GST. For Hsl7(674-827) and Hsl7(674-736), the sequence at the 5' end was 5'-GGA TCC TCT TTG GAG-3'; for Hsl7(737-827), 5'-GGA TCC GAA GAA GAA CAG-3'; and, for Hsl7(771-827), 5'-GGA TCC ATC AAT AAG-3' (BamHI sites underlined). At the 3' end, three of the fragments contained the naturally occurring stop codon followed by an EcoRI site, whereas the fragment corresponding to Hsl7(674-736) contained an introduced stop codon followed by an EcoRI site, 5'-GAC ATT GAA AAC TAA GAA TTC-3' (EcoRI site underlined; stop codon in bold). All four fragments were cleaved with BamHI and EcoRI and inserted into pGEX-4T that had been cleaved with BamHI and EcoRI, yielding pGEX-HSL7(674-827), pGEX-HSL7(674-736), pGEX-HSL7(737-827), and pGEX-HSL7(771-827), respectively.
Protein Binding to Immobilized GST Fusions
GST, GST-Hsl1(833-1518), GST-Swe1, or other GST fusions, as indicated, were expressed in E. coli and purified by binding to glutathione-agarose beads (Amersham Pharmacia Biotech), as instructed by the manufacturer. Beads coated with equal amounts of protein were incubated with radiolabeled proteins, prepared by with the use of a commercial kit for coupled in vitro transcription-translation (Promega), at 4°C for 1 h in ice-cold lysis buffer (20 mM Tris-HCl, pH 8.0, 12.5 mM potassium acetate, 4 mM MgCl2, 0.5 mM EDTA, 5 mM sodium bisulfite, 0.1% Tween 20, 12.5% glycerol) followed by three washes (1 ml each) with the same buffer. Bound proteins were recovered from the washed beads by elution with 30 µl of lysis buffer containing freshly prepared 20 mM glutathione (pH 8.0). After incubation for 5 min, the beads were removed by centrifugation in a microfuge at maximum speed for 10 min at room temperature. Proteins in the resulting supernatant fraction were solubilized by addition of 10 µl of 4-times-concentrated SDS-PAGE sample buffer and boiling for 2 min. Samples of the solubilized eluate were resolved by SDS-PAGE and analyzed by autoradiography.
Isolation of Hsl7 Mutants
YCpT-ADHp-GAL4(DBD)-HSL7 was amplified with the use of primers
231-1 (5'-CAA TCA ACT CCA AGC TTG AAG CAA GCC-3') and HSL7-3 (5'-GTG
ACC CAC TGA CCC AGA AGG TTC C-3') under standard conditions with
Taq DNA polymerase (PerkinElmer Cetus, Norwalk, CT), which, in our experience, is sufficiently error-prone to generate mutations at
a low frequency. A sample (25 µg) of the resulting PCR product was
mixed with a sample of YCpT-ADHp-GAL4(DBD)-HSL7 (5 µg) that had been
gapped by prior cleavage with NsiI and XhoI, and
the mixture was used for DNA-mediated transformation of strain YD116 (MATa) with the use of the lithium acetate method
(Soni et al., 1993
). Transformants harboring the resulting
library of YCpT-ADHp-GAL4(DBD)-HSL7 derivatives containing potentially
mutated HSL7 sequences, generated by gap repair in situ
(Muhlrad et al., 1992
), were selected by plating on 70 standard (9-cm-diameter) Petri dishes containing SCGlc-Trp medium,
which were incubated at 30°C for 3 d. Each of the resulting
yeast colonies was transferred, with the use of a sterile toothpick, to
a large (14-cm-diameter) Petri dish (260 colonies/dish) containing
SCGlc-Trp medium and incubated at 30°C for 3 d. The resulting
patches were transferred by replica-plating onto two YPD plates that
had been spread with lawns of saturated cultures of YD119
(MAT
) that harbored, respectively, either
pACT-HSL1(987-1518) or pACT-SWE1(295-819). After overnight incubation
at 30°C to allow for mating and propagation of the resulting
diploids, the patches from each YPD plate were transferred, by replica
plating, to each of two large Petri dishes, one containing SCGlc-Trp-Leu and the other containing SCGlc-Trp-Leu-Ura, to score for
expression of the URA3 reporter gene.
Immunoprecipitations
Protease-deficient strain BJ2168 (Table 1) carrying plasmids coexpressing GFP-HSL7 with either c-Myc-tagged HSL7, or untagged HSL7, under control of the GAL1 promoter were pregrown under appropriate selective conditions in SCRaf medium to an A600 nm of 0.6, induced by addition of galactose (2% final concentration), and incubated with shaking for 2 h. Cells were harvested, washed with phosphate-buffered saline (PBS), and lysed by vigorous vortex mixing with glass beads in ice-cold lysis buffer (20 mM Tris-HCl, pH 7.2, 12.5 mM potassium acetate, 4 mM MgCl2, 0.5 mM EDTA, 5 mM sodium bisulphite, 0.1% Tween 20, 12.5% glycerol) containing 1 mM dithiothreitol and protease inhibitors (2 µg/ml leupeptin, 2 µg/ml pepstatin A, 1 mM benzamidine, 2 µg/ml aprotinin, and 1 mM phenylmethylsulfonyl fluoride). The resulting crude extracts were clarified by centrifugation in a microcentrifuge for 10 min at 4°C, and then by sedimentation at 30,000 × g in a tabletop ultracentrifuge for 30 min at 4°C. Samples (1 mg of total protein) of the extracts were diluted into lysis buffer (200-µl final volume) and mixed with 20 µl of a suspension of protein A + protein G (A/G)-agarose beads (Calbiochem). For preclearing, these samples were incubated for 1 h at 4°C on a roller drum and then the beads were removed by centrifugation in a microcentrifuge at maximum speed for 5 min at 4°C. The resulting supernatant solution was transferred to a fresh tube containing another aliquot (20 µl) of A/G-agarose beads and 1 µl of mouse ascites fluid containing anti-c-Myc monoclonal antibody (mAb), 9E10 (or 1 µl of affinity-purified anti-HA mAb; see below). After incubation on a roller drum for 2 h at 4°C, the bead-bound immune complexes were collected by brief centrifugation, washed three times (1 ml each) with ice-cold lysis buffer, resuspended in SDS-PAGE sample buffer, and solubilized by incubation in a boiling water bath for 10 min. After removal of any residual particulate material by centrifugation for 10 min at room temperature, samples of the resulting supernatant fraction were resolved by SDS-PAGE, transferred to a membrane filter (Immobilon-P; Millipore) with the use of a semidry transfer apparatus (Bio-Rad, Hercules, CA), analyzed by immunoblotting with the use of appropriate primary antibodies, followed by appropriate horseradish peroxidase-conjugated secondary antibodies, and visualized with the use of a commercial chemiluminescence detection system (Renaissance; PerkinElmer Life Science Products, Boston, MA).
Protein Kinase Assay in Immune Complexes
Protease-deficient yeast strain MJY153 (Table 1) carrying either
YCpLG-HSL1(HA)3 or
YCpLG-HSL1-K110R(HA)3 were pregrown in SCRaf
medium lacking leucine to an A600nm of 0.6, induced by addition of galactose (2% final concentration), and
incubated with shaking for 2 h. Cells were harvested, washed with
PBS, and lysed by vigorous vortex mixing with glass beads in ice-cold
lysis buffer (see above) containing 1 mM dithiothreitol, protease
inhibitors (2 µg/ml leupeptin, 2 µg/ml pepstatin A, 1 mM
benzamidine, 2 µg/ml aprotinin, and 1 mM phenylmethylsulfonyl
fluoride) and phosphatase inhibitors (10 mM sodium pyrophosphate, 10 mM
NaN3, 10 mM NaF, 0.4 mM sodium meta-vanadate, 0.4 mM sodium ortho-vanadate, 0.1 mM
-glycerol-phosphate, and 1 µg/ml phosvitin). The resulting
crude extracts were clarified by centrifugation in a microcentrifuge
for 10 min at 4°C. The supernatant solution was removed and a sample
(1 mg of total protein) was diluted to 200 µl in cold lysis buffer,
preadsorbed for 30 min with 20 µl of protein A/G-agarose beads
(Calbiochem) at 4°C with rotary agitation. The beads were then
removed by sedimentation in a microfuge for 10 min at 4°C. The
precleared supernatant fraction was transferred to a fresh tube
containing 20 µl of protein A/G-agarose beads and 1 µl of anti-HA
mAb HA.11 (Covance Research Products, Richmond, CA). After incubation
at 4°C with rotary agitation for 1 h, the bead-bound immune
complexes were collected by brief centrifugation, washed three times
with 1 ml of cold lysis buffer, and then twice with kinase assay buffer
(50 mM HEPES, pH 7.8, 1 mM EGTA, 2 mM MgCl2, 1 mM
dithiothreitol, 0.5 mM sodium ortho-vanadate, and 10 mM
-glycerol-phosphate). The suspension of beads was split into two
equal portions. One portion was solubilized by boiling in SDS-PAGE
sample buffer for 2 min, resolved by SDS-PAGE, transferred electrophoretically to an Immobilon-P membrane (Millipore) with the use
of a semidry transfer cell (Bio-Rad), and analyzed by immunoblotting. The other portion was resuspended in
kinase buffer (30-µl final volume) containing 20 µM
[
-32P]ATP (1.7 × 107 cpm/nmol), and 1 µg of the appropriate
purified GST-Hsl7 derivative and incubated at 30°C for 30 min.
To terminate the reaction, 10 µl of 4× SDS-PAGE buffer was added
(1× final concentration) followed by boiling for 2 min. Proteins were
resolved by SDS-PAGE and analyzed by autoradiography with the use of
either x-ray film or a PhosphorImager (Molecular Dynamics, Sunnyvale, CA).
Preparation of GST-Hsl7 from Yeast
To prepare GST, GST-Hsl7, GST-Hsl7(1-685), and the other
derivatives indicated, from yeast, cultures (1 liter) of strain BJ2168 carrying the appropriate plasmid were grown in SCRaf lacking leucine to
A600nm of 1.0, induced by addition of galactose
(2% final concentration) and incubated with shaking for 12 h at
30°C. Cells were harvested, washed with PBS, and lysed by vigorous
vortex mixing with glass beads in ice-cold lysis buffer (see above)
containing 1 mM dithiothreitol, protease inhibitors (2 µg/ml
leupeptin, 2 µg/ml pepstatin A, 1 mM benzamidine, 2 µg/ml
aprotinin, and 1 mM phenylmethylsulfonyl fluoride). The resulting crude
extracts were clarified by centrifugation in a microcentrifuge for 10 min at 4°C and desalted by passage over a column containing a 10-ml
bed of Sephadex G-25 (Amersham Pharmacia Biotech) to remove endogenous
glutathione. The column was eluted with 20 ml of lysis buffer and the
flow-through fraction was incubated with 500 µl of a slurry of
glutathione-agarose beads (Amersham Pharmacia Biotech) at 4°C with
rotary agitation for 1 h. The beads were collected by
centrifugation, washed three times with 10 ml of wash buffer (50 mM
Tris-HCl, pH 8.0, 500 mM NaCl, and 0.1% Tween 20), and placed into an
empty glass column. Bead-bound proteins were released by rinsing the
beads with 10 ml of elution buffer (50 mM Tris-HCl, pH 8.0, 500 mM
NaCl, 0.1% Tween 20, and 20 mM freshly prepared glutathione). The
eluate was concentrated to a protein concentration of ~0.2 mg/ml, and the elution buffer was replaced with 50 mM Tris-HCl, pH 8.0, containing 10% glycerol, with the use of a microconcentration device
(Microcon-30; Amicon, Beverly, MA) and stored at
70°C.
Indirect Immunofluorescence and Fluorescence Microscopy
For indirect immunofluorescence, exponentially growing cells
were fixed with 3.7% formaldehyde in 0.1 M potassium phosphate, pH
6.5, for 30 min at room temperature and washed in 0.1 M potassium phosphate, pH 6.5. Fixed cells were resuspended in 0.2 M Tris-HCl, pH
9.0, containing 20 mM EDTA, pH 8.0, 1 M NaCl, and 80 mM
-mercaptoethanol, incubated at room temperature for 10 min, washed
once with potassium phosphate-sodium citrate, pH 5.8, containing 1 M
NaCl and twice with potassium phosphate-sodium citrate, pH 5.8, resuspended in 1 ml of solution A (1.2 M sorbitol, 0.1 M potassium
phosphate, pH 6.5, 0.5 mM MgCl2) containing 0.14 M
-mercaptoethanol, and digested with 110 µl of Glusulase
(PerkinElmer Life Science Products) and 0.6 mg/ml Zymolyase 100T
(Seikagaku, Tokyo, Japan). The digested cells were washed twice with
solution A, applied to the wells of poly-L-lysine (Ted
Pella, Redding, CA)-coated multiwell microscope slides, and
permeabilized by treatment at
20°C with, successively, methanol for
6 min and acetone for 30 s. Permeabilized cells were rehydrated in
PBS, pH 7.3, blocked in PBS containing 1 mg/ml bovine serum albumin,
and incubated overnight at 4°C with an appropriate primary antibody
(at the dilution indicated): rat anti-yeast
-tubulin mAb YOL1/34
(1:200) (Kilmartin et al., 1982
); affinity-purified mouse
polyclonal anti-Hsl7 antibodies (1:500) (Shulewitz et al., 1999
); mouse anti-c-Myc mAb 9E10 (1:1000) (Evan et al.,
1985
); and/or, rabbit polyclonal anti-yeast Tub4 (
-tubulin)
antibodies (1:5000) (generous gift of John Kilmartin, Medical Research
Council, Cambridge, United Kingdom). After incubation, cells were
washed several times with PBS containing 1 mg/ml bovine serum albumin, and incubated for 2 h in the dark with an appropriate secondary antibody (at the dilution indicated): indocarbocyanine (Cy3)-conjugated goat anti-rat IgG heavy chain (Cappel/Organon Teknika, Malvern, PA)
(1:300), Cy3-conjugated donkey anti-mouse immunoglobulin (Jackson ImmmunoResearch, West Grove, PA) (1:500); and/or fluorescein
isothiocyanate-conjugated donkey anti-rabbit immunoglobulin (Jackson
ImmmunoResearch) (1:200). Finally, stained cells were washed six times
with PBS; in some experiments, 4'-6-diamidino-2-phenylindole (DAPI) (1 µg/µl) was added in the fourth wash to counterstain nuclear DNA.
For cells expressing GFP, a milder fixation regimen was used: treatment with 3.7% formaldehyde for only 10 min, and the methanol/acetone treatment and rehydration steps were omitted.
For fluorescence microscopy and indirect immunofluorescence, cells were examined with a TE300 microscope (Nikon, Melville, NY) equipped with a 100×/1.4 Plan-Apo objective and a 1.4 numerical aperture condenser. Digital images were acquired with a bottom-ported Orca 100 charge-coupled device camera (Hamamatsu, Bridgewater, NJ) and Phase 3 Imaging Systems software. Samples for time-lapse fluorescence microscopy were embedded in a thin layer of solid SCGlc medium containing purified agarose (instead of standard agar) solidified under sterile conditions on an excavated microscope slide.
Immunoelectron Microscopy
Samples were frozen and subjected to freeze substitution,
according to methods described in detail elsewhere (McDonald, 1999
). Briefly, yeast cells were cryofixed in a Bal-Tec HPM010 high-pressure freezer, freeze-substituted in 0.2% glutaraldehyde plus 0.1% uranyl acetate for 3 d at
90°C, and then warmed to room temperature over a 12-h period. Cells were rinsed several times in pure acetone and
then infiltrated with LR White resin overnight, placed in flat-bottom
polypropylene capsules (catalog no. 133-1; Ted Pella) and polymerized
at 60°C for 2 d in a nitrogen gas environment. Thin (50-nm)
sections were cut on a Reichert UltracutE microtome, floated onto
Formvar- and carbon-coated nickel grids, and incubated with
affinity-purified mouse polyclonal anti-Hsl7 antibodies (1:50) for
1 h. After rinsing with PBS, the sections were then incubated with
10-nm gold particles decorated with donkey anti-mouse immunoglobulin (1:20) for either 1 h or overnight at 4°C. After rinsing with PBS, the sections were fixed in 0.5% glutaraldehyde for 5 min, rinsed
in distilled water, and poststained with uranyl acetate and lead
citrate. Sections were examined in a JEOL 100CX electron microscope.
| |
RESULTS |
|---|
|
|
|---|
Hsl7 Is Phosphorylated by Hsl1
Based on electrophoretic mobility shift, Hsl7 is modified in vivo
in an Hsl1-dependent manner (McMillan et al., 1999
);
however, whether Hsl7 is phosphorylated by Hsl1, or by some other
Hsl1-activated protein kinase, was not addressed previously. To examine
whether Hsl7 is a direct substrate of Hsl1, wild-type HSL1
and a catalytically inactive (and noncomplementing) mutant,
hsl1(K110R), each tagged with a C-terminal triple-HA
epitope, were expressed separately in a protease-deficient
hsl1
strain (MJY153) by brief (2-h) induction from the
GAL1 promoter on a CEN plasmid. Extracts were
prepared and subjected to immunoprecipitation with the use of anti-HA
mAb HA.11. To measure phosphotransferase activity of bead-bound Hsl1, the resulting immune complexes were incubated in a buffer containing Mg2+ and [
-32P]ATP,
along with GST fusions to full-length Hsl7 and various segments of it
(purified from yeast by binding to and elution from
glutathione-agarose). After quenching the reactions, radiolabeled products were resolved by SDS-PAGE and examined by autoradiography. As
anticipated, based on prior observations (Barral et al.,
1999
), Hsl1 underwent robust autophosphorylation (Figure
1, left); autophosphorylation was
abrogated almost completely by the substitution mutation (K110R) in
conserved protein kinase domain II (Hanks and Hunter, 1995
) (Figure 1,
right), as expected. We found that GST-Hsl7 was an efficient substrate
for Hsl1, but was not detectably phosphorylated by catalytically
inactive Hsl1 (Figure 1A, left versus right), ruling out that the
observed phosphorylation was due to a coprecipitating protein kinase.
Truncations of Hsl7 (fused to GST), even one that removed just 142 residues from the C terminus, were unable to serve as phosphoacceptors,
demonstrating that GST itself is not phosphorylated by Hsl1 and
suggesting that this segment contains the site(s) of Hsl1-mediated
phosphorylation. Indeed, this same C-terminal region (fused to GST and
purified from bacteria) was phosphorylated by Hsl1 at least as
efficiently as full-length Hsl7 (Figure 1B); further subdivision of
this portion of Hsl7 mapped the Hsl1 phosphorylation site(s) to a
33-residue region (residues 737-770). Site-directed mutagenesis showed
that the phosphorylated residue is Ser753 (Figure 1C). Thus, Hsl7 is
the first bona fide cellular substrate of Hsl1 to be identified.
|
Again, as judged by electrophoretic mobility shift, modification of
Swe1 in vivo is dependent on Hsl1 (Shulewitz et al., 1999
) and on at least one other protein kinase, Elm1 (Sreenivasan and Kellogg, 1999
). Moreover, it has been reported that in vitro Nim1/Cdr1, a fission yeast ortholog of Hsl1, can phosphorylate Wee1, the fission
yeast relative of Swe1 (Coleman et al., 1993
). Hence, we
also investigated whether Swe1 is a direct substrate of Hsl1 with the
use of the same assay method. To avoid any contribution from the kinase
activity of Swe1 itself, we purified a catalytically inactive (and
noncomplementing) mutant, Swe1(K472A), both as a GST fusion from
bacteria and as an otherwise native protein (tagged with an N-terminal
c-Myc epitope) from yeast. When either bacterially expressed GST-Swe1
or Myc-Swe1 produced in yeast were added, no Hsl1-dependent
incorporation of radioactivity was observed into either of these
purified proteins above the background observed with the catalytically
inactive Hsl1 mutant (our unpublished results). Because Hsl7 may help
to tether Swe1 to Hsl1 (Shulewitz et al., 1999
) and/or
possibly methylate Swe1 (Frankel and Clarke, 2000
; Lee et
al., 2000
) and thereby perhaps make it a more efficient substrate
for Hsl1, we also performed essentially identical assays in which
various amounts of purified GST-Hsl7 was also included; however, no
enhancement of Swe1 phosphorylation was observed (our unpublished
results). Thus, in marked contrast to Hsl7, and somewhat unexpectedly,
Swe1 does not appear to be an efficient substrate for Hsl1.
Hsl7 Binds Directly to Hsl1 and Swe1
We have shown previously that Hsl7 can associate with either Hsl1
or Swe1, both in vivo (with the use of the two-hybrid method) and in
cell extracts (as judged by coimmunoprecipitation) (Shulewitz et
al., 1999
). Prior studies suggested that the C terminus of Hsl1 is
responsible for its association with Hsl7, whereas most of Swe1
appeared to be necessary for its association with Hsl7 (Shulewitz
et al., 1999
). To determine whether these associations represent direct physical interactions between Hsl7 and each of these
partners, we prepared radiolabeled Hsl7 by in vitro translation in a
rabbit reticulocyte lysate and examined its ability to bind to GST
alone or to GST-Hsl1(833-1518) and GST-Swe1, which had been expressed
in and purified from bacteria and then immobilized on
glutathione-agarose beads. Hsl7 bound reproducibly to both GST-Hsl1(833-1518) and GST-Swe1, whereas no detectable binding to GST
was ever observed (Figure 2A, top). In
most experiments, Hsl7 appeared to bind more strongly to GST-Swe1
(
5% of input) and less strongly to Hsl1 (~1% of input); however,
due to nonspecific degradation, the fraction of the bead-bound
GST-Hsl1(833-1518) fusion that was intact was always less than the
fraction of bead-bound GST-Swe1 that was intact (Figure 2A, bottom).
These results demonstrate that the interactions between Hsl7 and Hsl1,
and between Hsl7 and Swe1, are direct and do not require bridging by
any other yeast protein.
|
Delineation of the Hsl1- and Swe1-binding Domains of Hsl7
To gain more insight about the nature of the interactions between
Hsl7 and both Hsl1 and Swe1, we identified the segments of Hsl7 that
mediate its direct physical association with these proteins by using
two independent methods. First, as an extension of the binding assays
that demonstrated that radiolabeled full-length Hsl7 can bind
specifically to both GST-Hsl1(833-1518) and GST-Swe1 (Figure 2A), we
prepared various subfragments of Hsl7 in radiolabeled form by in
vitro translation and tested their ability to bind to
GST-Hsl1(833-1518) and to GST-Swe1, and also to smaller segments of
both Swe1 and Hsl1 that appear to harbor their minimal Hsl7-binding domains (Shulewitz, 2000
). Indeed, we found that three overlapping regions of the N terminus of Hsl7 [Hsl7(1-246), Hsl7(88-544), and
Hsl7(168-345)] were able to associate specifically with immobilized, bacterially expressed GST-Hsl1(833-1518) and GST-Hsl1(1018-1244; 1482-1518), but not with GST alone (Figure 2B). As judged by the fraction of the input retained, Hsl7(168-345) bound with the highest apparent affinity. In contrast, a more C-terminal segment,
Hsl7(316-636), showed little or no binding to either Hsl1(833-1518)
or GST-Swe1 above the nonspecific background (Figure 2B). Likewise, a
more N-terminal segment, Hsl7(1-226), displayed no binding above
background (our unpublished results). Therefore, the minimal region of
Hsl7 sufficient for binding to Hsl1 in vitro is contained in the region spanned by residues 168-246. The results for Hsl7 binding to Swe1 were
somewhat more ambiguous; however, sequences in Hsl7 N-terminal to
residue 168 appear to make important contributions to its association with Swe1 (Figure 2B).
To confirm these conclusions in vivo, we used the two-hybrid method
(Fields and Sternglanz, 1994
). As we previously reported, a
Gal4(DBD)-Hsl7 fusion interacts with Gal4(TAD)-Hsl1(987-1518) and
Gal4(TAD)-Swe1(295-819) fusions in the two-hybrid assay (Shulewitz et al., 1999
). Therefore, we generated a modest collection
of deletions (mainly N-terminal truncations) of Gal4(DBD)-Hsl7 and tested whether they retained the ability to interact with
Gal4(TAD)-Hsl1(987-1518) and Gal4(TAD)-Swe1(295-819). The only
construct that preserved Hsl1- and Swe1-binding was one that included
the intact N-terminal domain of Hsl7 (residues 1-533) (Figure 2C),
which includes the regions identified in the biochemical studies
(Figure 2, A and B). Indeed, removal of residues 1-223 eliminated the
ability of Hsl7 to associate with Hsl1 and Swe1 (Figure 2C). Likewise,
removal of the region between residues 224 and 391 was sufficient to
abrogate interaction with Hsl1 and Swe1. Taken together, the binding
studies and the two-hybrid analysis, delineate an ~160-residue
segment of Hsl7 (residues 88-246) that is necessary and sufficient for its interaction with Hsl1 and Swe1 both in vivo and in vitro.
Point Mutants of Hsl7 Specifically Defective for Association with Hsl1
To pinpoint individual residues in Hsl7 important for its
interaction with Hsl1 and Swe1, we devised a variation on the
differential interaction trap method (White, 1996
; Inouye et
al., 1997
) to screen for mutations in Hsl7 that interfere with its
association with Hsl1, but not its association with Swe1, and
vice-versa. The method we developed is described in detail in MATERIALS
AND METHODS. In brief, to achieve the uniform expression and plasmid maintenance required for a large-scale screen, instead of expressing Gal4(DBD)-Hsl7 from the ADH1 promoter on the 2 µm DNA
plasmid used previously (pAS1-HSL7) (Shulewitz et al.,
1999
), we constructed a low-copy (CEN) plasmid expressing
Gal4(DBD)-Hsl7 from the ADH1 promoter
(YCpT-ADHp-GAL4(DBD)-HSL7). DNA containing the entire HSL7
gene was randomly mutagenized with the use of error-prone PCR and the
resulting amplification products were recombined into YCpT-ADHp-GAL4(DBD)-HSL7 by in vivo gap repair (Muhlrad et
al., 1992
) in the MATa reporter strain YD116
(Durfee et al., 1999
). The transformants obtained, carrying
the collection of mutagenized Gal4(DBD)-Hsl7, were individually mated
to two MAT
reporter strains otherwise isogenic to YD116,
one carrying plasmid pACT-HSL1(987-1518) and the other carrying
plasmid pACT-SWE1(295-819). Therefore, two diploids were generated
from each original transformant: one containing mutagenized
Gal4(DBD)-Hsl7 and Gal4(TAD)-Hsl1(987-1518), and the other containing
the same Gal4(DBD)-Hsl7 variant and Gal4(TAD)-Swe1(295-819). Successful interaction was scored by expression of the reporter gene
(URA3 under upstream activation
sequenceGAL control), as judged by ability to
grow on
Ura plates.
As expected, most of the Gal4(DBD)-Hsl7-containing transformants
yielded Ura+ diploids with both
Gal4(TAD)-Hsl1(987-1518) and Gal4(TAD)-Swe1(295-819), indicating that
neither protein-protein interaction had been perturbed. Some yielded
diploids that were both Ura
, indicating that
both interactions had been destroyed. However, of 7000 transformants
initially screened, 30 reproducibly yielded Ura+
diploids when mated to the cells expressing Gal4(TAD)-Swe1(295-819), but Ura
diploids when mated to cells expressing
Gal4(TAD)-Hsl1(987-1518). This class of mutants was designated
"Hbd" (for Hsl1-binding-defective). For reasons we do not yet
understand, no mutants of the opposite class, so-called "Sbd" (for
Swe1-binding-defective), were obtained. Of the 30 Hbd mutants, six
alleles (hsl7-21, hsl7-22, hsl7-23, hsl7-24, hsl7-27,
and hsl7-28) were chosen for further detailed study because
immunoblot analysis indicated that each mutant
Gal4(DBD)-Hsl7 was apparently full-length (our unpublished results).
The entire HSL7 open reading frame in each of these six
alleles was determined by automated nucleotide sequence analysis of the
corresponding DNA. All six alleles contained only a single base pair
change that resulted in a single amino acid substitution mutation
(Figure 3A, top). The hsl7-27
and hsl7-28 alleles, although causing the same amino acid
change, resulted from different base pair changes and, hence, were not
siblings; however, the hsl7-22 and hsl7-24 alleles were identical. Thus, four different single-substitution mutations were isolated: F242L (hsl7-27 and
hsl7-28); P250Y (hsl7-22/hsl7-24); V251A (hsl7-21); and, K254E (hsl7-23).
Reassuringly, all four point mutations fell within or immediately
adjacent to the C-terminal boundary of the region of Hsl7 (residues
168-246) identified as important for interaction with Hsl1 by the
two-hybrid and in vitro binding experiments. Moreover, all four
mutations fall within a segment of Hsl7 that has high homology to its
known orthologs in other organisms (Figure 3A, bottom) and alter
residues that are highly conserved, suggesting that these mutations
fall within a conserved Hsl1-binding motif.
|
Association of Hsl7 with Hsl1 Is Required for Down-Regulation of Swe1 at G2-M
Our isolation of alleles of Hsl7 that perturb only its interaction
with Hsl1 provided a means to determine whether stable association with
Hsl1 is required for Hsl7 function. To do so, we first examined whether
each of the four mutants was able to complement an hsl7
mutation. As has been amply demonstrated previously (Ma et
al., 1996
; Shulewitz et al., 1999
), hsl7
cells display a dramatically elongated bud (Figure 3B, i). Wild-type
HSL7 expressed from its own promoter on a low copy
(CEN) plasmid completely restored normal morphology (Figure
3B, ii). In marked contrast, when expressed in the same manner,
none of the hsl7 mutants [Hsl7(F242L), Hsl7(P250Y), Hsl7(V251A), or Hsl7(K254E)] was able to complement (Figure 3B, iii-vi), despite the fact that each of the mutant proteins was expressed at a level indistinguishable from wild-type Hsl7, as judged
by immunoblotting (our unpublished results). None of
the four mutant proteins had any detectable effect when expressed in an
otherwise isogenic HSL7+ strain (our
unpublished results), indicating that they do not exert any toxic,
dominant-negative effect on cell morphology. Because it has been amply
demonstrated that the elongated buds observed in hsl7
cells are indicative of hyperactive Swe1 (Ma et al., 1996
;
McMillan et al., 1999
; Shulewitz et al., 1999
), the fact that each of the Hsl1-binding-defective Hsl7 mutants was
unable to rescue this phenotype shows that stable association of Hsl7
with Hsl1 is required for down-regulation of Swe1.
Association of Hsl7 with Hsl1 Is Required for Hsl7 Localization at Bud Neck
We have recently demonstrated that Hsl7 fails to localize to
the bud neck in an hsl1
cell, but is still localized to
the bud neck in cells expressing catalytically inactive Hsl1(K110R) (Shulewitz et al., 1999
), suggesting that binding of Hsl7 to
Hsl1 (rather than modification by Hsl1) is required for recruitment of
Hsl7 to this location. The availability of the Hsl1-binding-defective Hsl7 alleles allowed us to test directly whether association of Hsl7
with Hsl1 is required for accumulation of Hsl7 at the bud neck, even in
cells expressing normal levels of wild-type Hsl1. We have shown
previously that a GFP-Hsl7 fusion is fully functional and, like native
Hsl7, targets to the bud neck in a septin- and Hsl1-dependent manner
(Shulewitz et al., 1999
). Hence, each Hsl7 mutant was fused
to GFP to permit examination of its subcellular distribution. Each of
the four mutants behaved identically; illustrative data are shown for
two of them, Hsl7(F242L) and Hsl7(P250Y), in Figure
4A. To make examination of the bud neck
unambiguous, cells with a swe1
mutation were used so that
even the hsl7
cells would have a normal morphology. When
expressed in wild-type cells (Figure 4A, i and ii), or in
swe1
cells (our unpublished results) GFP-Hsl7(F242L) and
GFP-Hsl7(P250Y) were efficiently targeted to the bud neck, as observed
previously for wild-type Hsl7 fused to GFP. However, in cells lacking
endogenous Hsl7, namely, hsl7
cells (our unpublished results) or hsl7
swe1
cells (Figure 4A, iii
and iv), neither GFP-Hsl7(F242L) nor GFP-Hsl7(P250Y) were present
detectably at the bud neck, but were present as a cytoplasmic
"dot." In contrast, in hsl7
or hsl7
swe1
cells, wild-type GFP-Hsl7 decorates the bud neck
exclusively (Shulewitz et al., 1999
). These data
demonstrated, first, that interaction with Hsl1 is indeed required for
stable accumulation of Hsl7 at the bud neck. However, as noted, when endogenous wild-type Hsl7 was present, each of the GFP-tagged Hsl7
mutants was able to localize to the bud neck, suggesting that Hsl7 is
normally an oligomeric protein and that each of the Hsl7 mutants
retained the capacity to multimerize with wild-type Hsl7.
|
Hsl7 Oligomerization
To test directly the capacity of Hsl7 to self-associate, differentially tagged versions of Hsl7 were coexpressed in the same strain (BJ2168) and their ability to interact was assessed by coimmunoprecipitation. For this purpose, we used a plasmid expressing GFP-Hsl7 and a plasmid expressing either Hsl7-myc or untagged Hsl7 (as a control), each expressed from the GAL1 promoter on a CEN plasmid. Lysates were prepared from these cells after brief (2-h) induction with galactose, and the resulting clarified extracts were subjected to immunoprecipitation with anti-Myc mAb 9E10. The immune complexes were resolved by SDS-PAGE and analyzed by immunoblotting with appropriate antibodies. As expected, in the extracts containing untagged Hsl7 and GFP-Hsl7, neither protein was immunoprecipitated by the anti-c-Myc mAb (Figure 4B, lane 1). In contrast, Hsl7-myc was efficiently immunoprecipitated by the anti-c-Myc mAb and GFP-Hsl7 was coimmunoprecipitated nearly stoichiometrically (Figure 4B, lane 2). These results demonstrate that in vivo Hsl7 does indeed self-associate to form a multimeric species.
Hsl7 Mutants Reveal a New Subcellular Location for Hsl7
As mentioned immediately above, all four of the Hsl7 point mutants
unable to interact stably with Hsl1 localized as a bright cytoplasmic
dot when present as the sole source of Hsl7 in the cell (Figure 4A, iii
and iv). Likewise, in hsl1
cells, wherein interaction of
even wild-type Hsl7 with Hsl1 cannot occur, we found that a GFP fusion
to normal Hsl7 also localized exclusively as a dot in the cytosol (see
below). This cytoplasmic dot was observed under other circumstances as
well. For example, Hsl7(1-685), which lacks 142 C-terminal residues
(Figure 1), is nonetheless able to complement a hsl7
mutation when expressed from the HSL7 promoter on a low-copy
(CEN) plasmid, restoring round cell morphology and showing
no G2 delay (our unpublished results). Correspondingly, when expressed
from the HSL7 promoter on a CEN plasmid,
GFP-Hsl7(1-685) localized strongly to the bud neck in
hsl7
cells; however, in many unbudded cells, in cells
with small buds, and even in some cells with medium-sized buds, we also
observed a very bright fluorescent dot (or, occasionally, 2 dots)
(Figure 5, A and B). Similarly, when a
GFP fusion to wild-type Hsl7 was overexpressed from the GAL1
promoter on a CEN plasmid (YCpLG-GFP-HSL7), in addition to bright decoration of the bud neck, the presence of a prominent cytoplasmic dot could be frequently visualized, even although the
background fluorescence of the cytoplasm was elevated due to the
overproduction (Figure 5C). Unlike Hsl7(1-685), in the case of GFP
fused to full-length Hsl7, only a single cytoplasmic dot was observed
reproducibly.
|
Dynamic Localization of Hsl7 During the Cell Cycle
Collectively, the observations described immediately above
suggested that accumulation of Hsl7 as a cytoplasmic dot was not an
artifact of mutant forms of Hsl7. To confirm that localization to the
cytosolic dot occurred normally and was physiologically relevant, we
first carefully examined cells expressing GFP-Hsl7 at near-normal
levels from the HSL7 promoter on a CEN plasmid (YCpT-GFP-HSL7) in asynchronous culture. In a total population of 393 cells examined, 65% showed exclusive staining at the bud neck, as we
have reported previously (Shulewitz et al., 1999
), whereas
28% showed Hsl7 concentrated exclusively as a small intracellular dot
and 7% displayed both staining patterns simultaneously (our unpublished results). We noted that cells with a bud (ranging from
small to large) always displayed staining at the neck, whereas all of
the cells that displayed the cytosolic dot and lacked a signal at the
neck were unbudded and cells with both staining patterns always had
only a small bud. These data suggested that Hsl7 localization changes
throughout the cell cycle in a regular manner. To obtain additional and
direct support for this conclusion, and to avoid artificial means for
synchronizing the cells, localization of GFP-Hsl7 was followed by
time-lapse fluorescence microscopy in individual cells embedded in thin
agar slabs. Newborn (unbudded) cells always displayed a cytoplasmic
dot, invariably closer to the incipient bud site than to any other part
of the cell surface; and, just after bud emergence, the signal at the
dot faded as the fluorescent ring at the bud neck appeared (Figure 5D).
The signal at the neck remained through most of the cell cycle, but disappeared rather abruptly, concomitant with the onset of anaphase but
before cytokinesis (Figure 5D). The loss of signal at late mitosis was
not due to cell cycle-dependent proteolysis of Hsl7 because
immunoblotting of extracts prepared from synchronized cultures indicates that Hsl7 is quite a stable protein (McMillan et al., 1999
; Shulewitz, 2000
). Alternatively, since
localization of Hsl7 to the bud neck requires stable association with
Hsl1, as we have demonstrated here, the loss of the GFP-Hsl7 signal at
the bud neck could be due to cell cycle-dependent degradation of Hsl1.
Indeed, it has recently been shown that Hsl1 is targeted for
destruction by the cell cycle-regulated ubiquitin ligase known as the
"anaphase-promoting complex" (or APC) (Burton and Solomon, 2000
).
Relocalization of Hsl7 from the cytoplasmic dot to the bud neck follows
the same kinetics as the appearance of Hsl1, which is detected at the
daughter-side septin ring from bud emergence until anaphase (Barral
et al., 1999
). However, in G1 cells, Hsl1 cannot be detected
and certainly does not localize as a cytoplasmic dot, even when an
Hsl1-GFP fusion is overexpressed from the GAL1 promoter
(Cid, unpublished results). Presumably, Hsl1 cannot accumulate until
the APC is inactivated, which does not occur until late G1 or the G1-S
transition (Amon et al., 1994
).
Hsl7 Localizes to the Cytoplasmic Face of the Spindle Pole Body in G1 Cells
To determine whether the cytoplasmic dot corresponded to a known
subcellular structure or compartment, several complementary approaches
were taken. First, costaining of cells expressing GFP-Hsl7 with the DNA
dye DAPI demonstrated that, in every cell containing a dot, the spot
was always immediately juxtaposed to the nucleus (Figure
6, A and B). Second, cells expressing
GFP-Hsl7 were costained with a rat monoclonal anti-yeast
-tubulin
antibody to determine the position of the dot with respect to
microtubules (under mild fixation conditions to preserve GFP
fluorescence). The GFP signal always coincided with the single astral
microtubule array in G1 cells (Figure 6C) and, occasionally, with one
end of the short spindle formed in S/G2 cells (Figure 6D), suggestive
of a protein that colocalizes with the SPB. Third, with the use of
indirect immunofluorescence with mouse monoclonal anti-Myc antibodies
to examine Hsl7 tagged with a C-terminal Myc epitope (Figure 6E) or
affinity-purified mouse polyclonal anti-Hsl7 antibodies to examine
native Hsl7 (Figure 6F), and rabbit polyclonal antibodies against Tub4
(yeast
-tubulin), a specific marker for the SPB (Sobel and Snyder,
1995
; Geissler et al., 1996
; Marschall et al., 1996
), the same dot was observed in G1 cells as was seen with the use
of GFP-Hsl7, and its position was congruent with Tub4. In cells with a
short spindle (presumably S phase), Hsl7 decorated only one of the two
SPBs (Figure 6G). However, as observed before for GFP-Hsl7 (Shulewitz
et al., 1999
), in M phase cells (marked by an elongated
spindle), all of the Hsl7 was localized to the bud neck and no
detectable Hsl7 was present at either SPB (Figure 6H).
|
Careful inspection of the merged images revealed that, although Hsl7
largely colocalized with Tub4 at the SPB, the Hsl7 staining always
extended slightly beyond the Tub4 staining and always toward the
cytoplasm and away from the nucleus. This observation suggested that
Hsl7 localizes specifically to the cytoplasmic side of the SPB. To
verify this conclusion, frozen thin sections of wild-type yeast cells
expressing Hs17-myc were stained with affinity-purified mouse
polyclonal anti-Hs17 antibodies and gold-labeled secondary antibodies,
and examined in the electron microscope. In every section where a
single (nonduplicated) SPB was observed, the gold particles clustered
prominently at the SPB on the cytoplasmic side of the nuclear envelope,
coincident with an electron-dense "cloud" of SPB-associated
material (Figure 7), and nowhere else. Control cells (hsl7
) showed no gold particles at this or
any other location (our unpublished results). The prominence of the electron-dense material on the outer (cytosolic) face of the SPB is
due, in part, to its better preservation with the use of the cryofixation method required for immunoelectron microscopy (compared with standard aldehyde-based fixation procedures) and, in part, to
overproduction of Hsl7-myc. However, compensating for ambiguities with
regard to the plane of sectioning when comparing these images and those
for normal control cells, the cytoplasmic density on the SPB in the
Hsl7-myc overproducers is only modestly enlarged (no more than 1.5-2
times its "normal" size) (McDonald, unpublished results). Taken
together, these results demonstrate that endogenous Hsl7 localizes to
the cytoplasmic side of the SPB during G1 phase, before its total
redistribution to the septin ring later in the cell cycle.
|
Displacement of Hsl7 from the SPB Occurs Concomitant with Bud Emergence
Redistribution of Hsl7 from the SPB to the septins seems to occur
at the time of bud emergence, or shortly thereafter (Figure 5D). To
further delineate the timing of Hsl7 translocation from the SPB to the
bud neck, several approaches were taken. First, cultures of cells
expressing GFP-Hsl7 at a near normal level (from the HSL7
promoter on a CEN plasmid) were synchronized in G1 by treatment with the mating pheromone
-factor. After 3 h, cells exhibited the pear-shaped morphology indicative of a pheromone-induced G1 arrest and projection ("shmoo tip") formation. Under these conditions, and consistent with arrest during G1 phase of the cell
cycle, GFP-Hsl7 was localized as a single cytoplasmic dot in every cell
(Figure 8A, left), which colocalized with
markers of the SPB (our unpublished results). The pheromone-treated
cells were then collected, washed to remove the
-factor, and
resuspended in fresh medium in two equal portions, one of which was
treated with latrunculin A (200 µM), an effective actin
polymerization inhibitor in yeast (Ayscough et al., 1997
),
and the other received an equivalent volume of solvent (dimethyl
sulfoxide) alone as a control. In the absence of latrunculin, the
washed cells proceeded synchronously through the cell cycle, and Hsl7
began to redistribute from the SPB to the neck of the incipient bud by
20-30 min after removal from
-factor (Figure 8A, right). This
timing seemed to correspond to events that just precede bud emergence
because most of the cells (
80%) had a distinct bud projecting from
the former shmoo tip with GFP-Hsl7 present at the neck by 40 min after
release from pheromone arrest. By 50-60 min after release, GFP-Hsl7
was completely redistributed to the bud neck (Figure 8A, right). In contrast, in the latrunculin A-treated cells, where bud emergence was
prevented, Hsl7 remained at the SPB (Figure 8A, right).
|
Next, localization of GFP-Hsl7 in cells carrying various cdc
mutations that block progression at early stages of the cell cycle was
examined. In cells carrying the cdc28-4 allele, which arrests specifically in G1 when shifted to nonpermissive temperature (Segal et al., 1998
), GFP-Hsl7 was localized exclusively to
the SPB (Figure 8B). In contrast, in cells carrying the
cdc4-1 allele, which blocks initiation of DNA replication,
but not bud emergence (Pringle and Hartwell, 1981
), due to the failure
of a ubiquitin ligase (SCFCdc4) to target a
specific Cdk inhibitor (Sic1) for destruction (Feldman et
al., 1997
), GFP-Hsl7 was located exclusively at the bud neck at
restrictive temperature (Figure 8C). Likewise, in cells carrying the
cdc34-1 allele, which also blocks initiation of DNA
replication, but not bud emergence (Pringle and Hartwell, 1981
),
because it inactivates the ubiquitin-conjugating enzyme required for
the function of multiple SCF complexes (Mathias et al.,
1998
), including that required for Swe1 destruction (Kaiser et
al., 1998
), GFP-Hsl7 was localized at the base of the markedly
elongated buds that formed in these mutant cells at nonpermissive
temperature (Figure 8D). For these experiments, we also constructed a
cdc4-1 hsl7
double mutant to avoid the possibility that
endogenous Hsl7 might compete with GFP-Hsl7 expressed from the plasmid
and thereby obscure localization of GFP-Hsl7 to the SPB. Even under
these conditions, GFP-Hsl7 was located at the bud neck and no
detectable SPB staining was observed (Figure 8E). To try to pinpoint
when during bud emergence Hsl7 relocates from the SPB to the bud neck,
the distributions of GFP-Hsl7, Hsl1-GFP, and a septin (Cdc10-GFP) were
examined in cells expressing each of these proteins and carrying a
specific temperature-sensitive rho1 allele
(rho1-104), which supports formation of very small abortive
buds at the restrictive temperature that are then susceptible to lysis
(Yamochi et al., 1994
). Complete loss of Rho1 function
compromises both cell wall biosynthesis and proper polarization of the
actin cytoskeleton (Cabib et al., 1998
). After 90 min at
restrictive temperature, 50 intact (unlysed) cells of each culture were
examined. In 100% of the cells, the septin (Cdc10-GFP) accumulated at
the base of the button-like buds (Figure 8G), whereas only 9 and 13%
of the cells, respectively, had Hsl1-GFP (Figure 8H) or GFP-Hsl7
(Figure 8I) at the same location. Given that we have amply demonstrated
above that association with Hsl1 is required for recruitment of Hsl7 to
the bud neck, the slightly lower value observed for Hsl1-GFP probably
reflects a limitation in our ability to detect Hsl1-GFP because it
decorates the septin ring less brightly than GFP-Hsl7. None of the
cells expressing GFP-Hsl7 displayed a cytoplasmic dot. We conclude, therefore, that bud emergence is necessary, but not sufficient, for
efficient recruitment of Hsl7 (mediated by Hsl1) to the septins at the
bud neck, and that displacement of Hsl7 from the SPB precedes, and can
occur in the absence of, its deposition at the bud neck.
Displacement of Hsl7 from the SPB Is Independent of SPB Dynamics
Among the events that occur before or concomitant with bud
emergence are duplication of the SPB and separation/migration of the
resulting two SPBs to form the poles of the short spindle. Hence, we
examined whether ejection of Hsl7 from the SPB and its localization at
the bud neck was dependent on any of these aspects of SPB dynamics. As
mentioned above, GFP-Hsl7 was able to relocate from the SPB to the bud
neck in both cdc4 and cdc34 mutants, in which SPB
separation does not occur (Pringle and Hartwell, 1981
). Thus, SPB
separation is not necessary for displacement of Hsl7 from the SPB. To
examine whether duplication of the SPB is required for removal of Hsl7,
we constructed a hsl7
cdc31-1 double mutant. The cdc31-1 mutation causes cells to arrest with a single
SPB, although bud development proceeds normally (Pringle and Hartwell, 1981
). At restrictive temperature, GFP-Hsl7 localized exclusively to
the septin ring at the bud neck in cdc31-1 hsl7
cells
(Figure 8F). Thus, both displacement of Hsl7 from the SPB and its
relocalization to the bud neck appeared to be independent of both SPB
duplication and separation. However, the latter results should perhaps
be interpreted with caution because Cdc31 is a component of the SPB (Spang et al., 1993
; Biggins and Rose, 1994
). Hence, Cdc31
itself could be involved in anchoring Hsl7 to the SPB; and, perturbing Cdc31 function might allow Hsl7 to detach from the SPB. However, we
could detect no obvious exacerbation of phenotypes when the cdc31-1 hsl7
double mutant was compared with its
parental single mutants, nor did we observe any effect of
HSL7 overexpression in cdc31-1 cells (our
unpublished results). Although indirect, the lack of obvious genetic
interaction is at least consistent with the view that Hsl7 and Cdc31 do
not associate physically. Moreover, Cdc31 is a component of the
so-called "half-bridge" substructure of the SPB (Spang et
al., 1993
; Biggins and Rose, 1994
), whereas our ultrastructural
analysis by immunoelectron microscopy places Hsl7 mainly at the
periphery of the SPB (Figure 7).
Redistribution of Hsl7 from Septin Ring to SPB
Based upon our time-lapse photomicroscopy (Figure 5, B and D),
Hsl7 is displaced from the bud neck in late anaphase, concomitant with
the destruction of Hsl1, and becomes associated with the SPB by the
completion of cytokinesis. To examine this aspect of the relocation of
Hsl7 in more detail, we first examined localization of GFP-Hsl7 in
cells carrying temperature-sensitive mutations in two core subunits of
the APC (Page and Hieter, 1999
). On shift to nonpermissive conditions,
cdc16 and cdc23 mutants undergo mitotic arrest
(Lamb et al., 1994
). In cells arrested at this stage,
GFP-Hsl7 localized exclusively to the bud neck, and SPB localization
could not be observed (Figure 8, J and K). This observation
suggests that APC-dependent degradation of Hsl1 is required to free
Hsl7 from the bud neck, as a prelude to its relocalization to the SPB. Normally, GFP-Hsl7 and native Hsl7 at the bud neck reside exclusively on the septin ring facing the daughter cell (Shulewitz et
al., 1999
). Interestingly, when either cdc16 or
cdc23 cells were left at restrictive temperature for >2 h,
this pronounced asymmetry was lost (i.e., the mother-side septin ring
became stained nearly as brightly as the bud-side septin ring).
We examined GFP-Hsl7 localization in cells arrested at a slightly later
stage of mitosis with the use of the cdc15-1 mutation, which inactivates a protein kinase necessary for exit from mitosis (Jaspersen et al., 1998
; Xu et al., 2000
),
causing a blockade of the anaphase-to-telophase transition. At the
nonpermissive temperature, GFP-Hsl7 at the bud neck was visible, but
faint, in nearly all of the cells, but in a large fraction of them
(~33%) a very faint signal at the SPB could also be observed in both the mother and/or the incipient daughter cell (Figure 8L). The reduction in GFP-Hsl7 fluorescence at the neck suggests that removal of
Hsl7 from the septin scaffold has commenced at this stage. Because the
cdc15-1 block is reversible upon temperature down-shift (Surana et al., 1993
), the arrested cells were collected and
resuspended in fresh medium at the permissive temperature, allowing the
cells to enter telophase and continue through the cell cycle. As the cells progressed through cytokinesis, the GFP-Hsl7 signal disappeared from the bud neck, whereas fluorescence at the SPB became distinctly more intense. By 60 min after down-shift, most cells had completed cytokinesis, and in the great majority (
80%) of the resulting single
unbudded cells the SPB was brightly stained (Figure 8M). In contrast to
the movement of GFP-Hsl7 from the SPB to the bud neck, addition of 200 µM latrunculin A did not affect the redistribution of GFP-Hsl7 from
the bud neck to the SPB upon downshift of cdc15-1 cells
(Figure 8N). Thus, when cells are allowed to complete mitosis, Hsl7 is
released from the septin rings and translocates to the SPB in an
actin-independent manner.
Hsl7 Relocation Does Not Require New Protein Synthesis or Microtubules
The experiments presented above did not distinguish between two
possibilities: 1) Hsl7 molecules at the SPB redistribute to the bud
neck, or 2) Hsl7 molecules are degraded after their release from the
SPB and only newly synthesized Hsl7 localizes at the bud neck. To
address this issue, cells were arrested in G1 by treatment with
-factor, and then pheromone was removed to allow cells to progress
synchronously through the cell cycle in either the absence or presence
of cycloheximide (10 µg/ml), a concentration of this inhibitor
sufficient to abrogate yeast protein synthesis. In the samples treated
with cycloheximide, bud emergence was considerably delayed (but
proceeds via utilization of pools of preformed components). At 1 h
after release from pheromone, only 14% of the cells (n = 100)
displayed buds, and by 2 h after release only 30% of the population displayed buds (and bud size was very heterogeneous). Nonetheless, in every cell that contained a bud, Hsl7 localized as a
ring to the bud neck (our unpublished results), suggesting that de novo
synthesis of Hsl7 is not required for its translocation from the SPB to
the septins. To determine whether Hsl7 recruitment to the bud neck
depended on microtubules, G1-arrested cells were released from
pheromone in medium lacking or containing the
mictrotubule-depolymerizing drug benomyl (10 µg/ml). In the
pheromone-treated cultures, 100% of cells displayed the single
SPB-associated dot (Figure 8A). After release, the untreated cells all
showed bright staining exclusively at the bud neck within 30 min, as
observed before (Figure 8A). Treatment with benomyl delayed budding by
~10 min and caused the cells to become slightly asynchronous;
nevertheless, by 1 h after release, that majority (55%) of the
cells (n = 100) displayed GFP-Hsl7 exclusively at the septin
rings, only 9% retained obvious dots, and the remainder were ambiguous
(our unpublished results). This observation suggests that microtubule
assembly is also not required for relocation of Hsl7 to the bud neck.
The effects of cycloheximide treatment were also examined in cells
released from cdc15-induced mitotic arrest. On decreasing the temperature, the presence of cycloheximide did not strongly affect
movement of GFP-Hsl7 from the septin rings to the SPB; at 1 h
after downshift, the majority (70%) of the cells (n = 100) displayed bright dots exclusively and the remainder of the cells were
similar, but showed some residual staining at the bud neck. Thus, like
redistribution of Hsl7 from the SPB to the septins, the return of Hsl7
from the bud neck to the SPB does not require new protein synthesis,
suggesting that the same population of Hsl7 is able to shuttle between
the two locations. In contrast, when cdc15-arrested cells
were downshifted in the presence of benomyl, the cells were unable to
resume cell cycle progression even after 1 h, and not unexpectedly
GFP-Hsl7 remained at the neck. To clarify whether this observation
implied a role for astral microtubules in Hsl7 movement from the bud
neck to the SPB, GFP-Hsl7(1-685) (which marks the SPB especially
brightly; Figure 5A) was introduced into a strain that contains the
cold-sensitive tub2-401 mutation. This tub2
allele specifically disrupts astral, but not spindle, microtubules at
the nonpermissive temperature (Sullivan and Huffaker, 1992
). After
8 h at restrictive temperature (16°C), the mutant formed
abnormally large cells, but the vast majority of the unbudded cells
displayed the characteristic SPB-associated dot (Figure 8, O and P).
Moreover, no difference was observed at this low temperature between
the tub4-401 strain and its otherwise isogenic parent
(n = 100 each) when the proportion of cells showing
GFP-Hsl7(1-685)-decorated SPBs in the population was counted,
suggesting that astral microtubules are not necessary for Hsl7 movement
from the bud neck to the SPB. Thus, the inhibition of Hsl7
relocalization by benomyl in cdc15 cells released from
temperature-induced arrest may reflect a blockade of mitotic exit by
the drug itself, perhaps as a consequence of reactivation of the
spindle assembly checkpoint (Rudner and Murray, 1996
).
Displacement of Hsl7 from SPB Is Independent of Hsl1
Hsl7 associates with the SPB at a cell cycle stage when Hsl1 is
not present in the cell (Barral et al., 1999
; McMillan
et al., 1999
) due to its APC-dependent degradation (Burton
and Solomon, 2000
). Conversely, as we have shown here, interaction of
Hsl7 with Hsl1 is required for Hsl7 localization to the bud neck.
Because redistribution of Hsl7 from the SPB to the septins occurs when Hsl1 is resynthesized and itself localizes to the bud neck (Barral et al., 1999
; McMillan et al., 1999
; Shulewitz
et al., 1999
), it seemed possible that, in addition to
playing a role in anchoring Hsl7 at the bud neck, Hsl1 might also play
a role in displacing Hsl7 from the SPB. However, several lines of
evidence indicate that release of Hsl7 from the SPB occurs
independently of Hsl1. First, as expected based on our findings
presented above, GFP-Hsl7 localized to the SPB in an hsl1
swe1
double mutant (elimination of Swe1 prevents cell
elongation resulting from absence of Hsl1; Ma et al., 1996
)
(Figure 9A) and in a septin
mutant, cdc10-11, at the restrictive temperature, in either
the presence (Figure 9B) or absence (Figure 9C) of a functional
SWE1 gene. Strikingly, when individual hsl1
(or hsl1
swe1
) cells were followed by time-lapse fluorescence microscopy (of the sort shown in Figure 5D),
the GFP-Hsl7 dot disappears shortly after bud emergence, just as in
wild-type cells (our unpublished results). Conversely, overproduction
of Hsl1 from the GAL1 promoter on a CEN plasmid (YCpLG-HSL1-HA3) (Figure 9, D and E) or elevation
of Hsl1 level by expression of an integrated nondegradable version
(Burton and Solomon, 2000
) that persists in G1 (Figure 9F) had no
dramatic effects on the distribution of GFP-Hsl7 between the SPB and
the septins (Figure 9, F-H), did not prevent GFP-Hsl7 from targeting to the SPB in G1 cells, and did not cause premature recruitment of
GFP-Hsl7 to the bud neck. Thus, regardless of whether Hsl1 was absent,
overproduced, or stabilized by mutation, there was no effect on the
dynamics of Hsl7 association with and release from the SPB in unbudded
(G1) cells.
|
| |
DISCUSSION |
|---|
|
|
|---|
We have recently proposed that, in budding yeast, Hsl7 serves as
an adapter linking the Hsl1 protein kinase and its putative substrate,
Swe1, allowing Hsl1 to inactivate Swe1 in response to assembly of the
septin filaments at the bud neck (Shulewitz et al., 1999
).
To better understand the role of Hsl7, we explored in this study
several features of Hsl7 in greater detail. Consistent with the
proposal that Hsl7 has an adapter function, we were able to demonstrate
direct physical association between Hsl7 and Hsl1, and between Hsl7 and
Swe1, and that stable Hsl7-Hsl1 interaction is required for
down-regulation of Swe1. We mapped the site in Hsl7 required for its
interaction with Hsl1 by several independent methods (in vitro binding,
two-hybrid interaction, random mutagenesis) and were able to pinpoint
individual residues in Hsl7 essential for Hsl1 binding, which appear to
define a conserved Hsl1-binding site. We found that Hsl7 oligomerizes
in vivo and serves as a direct substrate for Hsl1 in vitro. Somewhat
surprisingly, under the same conditions, Swe1 is not phosphorylated by
Hsl1, regardless of the presence of Hsl7. Finally, we discovered a new
subcellular location for Hsl7. We found that Hsl7 associates with the
SPB in a cell cycle-dependent manner, decorating the cytoplasmic face of the SPB in G1 cells before relocating to the septin rings as the bud
develops. This new finding raises the possibility that Hsl7 has other
functions in addition to its role at the bud neck.
Formation of Hsl7-Hsl1 Complexes Is Required for Inactivation of Swe1
Both Hsl1 (Barral et al., 1999
) and Hsl7 (Shulewitz
et al., 1999
) localize to the daughter-side septin ring in
budded cells. Deposition of Hsl7 at this location requires the presence
of Hsl1, whereas Hsl1 can localize to the bud neck in the absence of
Hsl7 (Barral et al., 1999
; Shulewitz et al.,
1999
). Moreover, Hsl7 and Hsl1 associate which each other, as indicated
by our previous, more circumstantial evidence (Shulewitz et
al., 1999
) and as demonstrated conclusively in this study. We
showed here that radiolabeled Hsl7 prepared by in vitro translation can
associate with the C terminus of Hsl1 (purified as a GST fusion from
bacteria), indicating that this association is direct and does not
require the participation of any other yeast proteins, consistent with
our previous evidence that Hsl1 recruits Hsl7 to the bud neck and not
vice versa (Shulewitz et al., 1999
). Furthermore,
single-residue substitution mutations in Hsl7 that prevent Hsl1 binding
(but do not perturb any other property of Hsl7 tested), no longer
localize to the septins and cannot complement the elongated bud
morphology of an hsl7
cell, in strong support of the
model that catastrophic down-regulation of Swe1 occurs at the bud neck
and requires formation of stable Hsl7-Hsl1 complexes at that site. We
showed previously that the state of modification of Swe1, as judged by
a gel mobility shift assay, is dramatically affected by the absence of
either Hsl1 or Hsl7 (Shulewitz et al., 1999
). Our current
work shows that just preventing Hsl7-Hsl1 association blocks Swe1
inactivation. Presumably, therefore, when Hsl7-Hsl1 complexes do not
assemble, Swe1 cannot be appropriately modified to become a target for
its SCFMet30-mediated ubiquitinylation and
subsequent proteasome-dependent destruction (Kaiser et al.,
1998
). Although Swe1 is a phosphoprotein (Sia et al., 1998
;
Sreenivasan and Kellogg, 1999
), it is not yet clear whether the
modification required for destruction of Swe1 is phosphorylation or
methylation (or both).
With the use of an immune-complex kinase assay in which Hsl1 displayed
both potent autophosphorylation and phosphotransferase activity (with
the use of GST-Hsl7 as an exogenous substrate), Hsl1 was unable to
phosphorylate Swe1. Although this negative result does not rule out
that Hsl1 is able to phosphorylate Swe1 under some conditions, it
raises the possibility that Swe1 may be regulated by posttranslational
modifications not mediated by Hsl1. In this regard, it is intriguing
that Hsl7 has a domain with readily detectable homology to
S-adenosyl-methionine-dependent protein-arginine
methyltransferases (PRMTs) (Ma, 2000
) and that both Hsl7 itself
(Frankel and Clarke, 2000
; Lee et al., 2000
) and its human
ortholog, JBP1 (Pollack et al., 1999
), reportedly display
PRMT activity in vitro. Hence, it is tempting to speculate that Hsl7
may convert specific Arg residues in Swe1 to their
-NG-monomethyl-Arg,
-NG,NG-bismethyl-Arg,
and/or
-NG,N'G-dimethyl-Arg
derivatives and that such modifications are important for marking Swe1
as a substrate for Hsl1 (or some other protein kinase) and/or as a
target for ubiquitinylation by the SCFMet30.
Consistent with this possibility, we found that Hsl7 can associate with
Swe1 in the absence of any other yeast protein, as might be expected
for an enzyme-substrate complex. However, the portion of Hsl7
responsible for its interaction with Swe1 seems to lie in the
amino-terminal region of Hsl7, well upstream of the PRMT homolog domain
(residues 350-660). Moreover, site-directed mutagenesis of seven
different conserved residues in the PRMT domain of Hsl7 fail to ablate
its ability to complement the elongated bud phenotype of an
hsl7
mutant (Shulewitz, 2000
). Furthermore, in our hands (Shulewitz and S.E. Crown, unpublished results), GST-Hsl7 or Hsl7-myc expressed in and purified from yeast or bacterial cells (in any of four
different buffers), with or without prephosphorylation by Hsl1, fails
to display detectable methyltransferase activity (with the use of any
of three different standard methyl-acceptor substrates) under
conditions where another yeast PRMT, Hmt1/Rmt1 (Gary et al.,
1996
; McBride et al., 2000
), displays potent activity. Finally, even in the presence of Hsl7, Hsl1 failed to phosphorylate Swe1. Thus, at the present time, the most reasonable conclusion is that
the Hsl1-Hsl7 module recruits Swe1 to the septin ring at the bud neck
so that Swe1 can be phosphorylated by another protein kinase resident
at this location. Candidates for this function include the following:
one (or both) of the other two Nim1-related protein kinases in S. cerevisiae, Kcc4 and Gin4, which also localize to the bud neck and
appear to be involved in promoting and/or monitoring septin assembly
(Carroll et al., 1998
; Barral et al., 1999
;
Longtine et al., 2000
); another bud neck-associated protein
kinase, Elm1, that also contributes to proper mitotic regulation
(Sreenivasan and Kellogg, 1999
; Bouquin et al., 2000
); and
the polo kinase homolog Cdc5, which also localizes, in part,
to the bud neck (Song et al., 2000
).
Hsl1-independent Functions of Hsl7
Our finding that Hsl7 localizes to the SPB in G1 cells suggests that it may have a discrete role at this site. Hsl1 does not appear to localize to the SPB, suggesting that Hsl7 function at the SPB is independent of Hsl1. Indeed, release of Hsl7 from the SPB at G1-S and association of Hsl7 with the SPB in late telophase-early G1 occur normally in the complete absence of Hsl1, even though Hsl7 cannot localize to the bud neck in the same cells. Thus, other components must be responsible for recruitment of Hsl7 to, and displacement of Hsl7 from, the SPB.
A truncation of Hsl7, Hsl7(1-685), lacking its C-terminal 142 amino
acids, is no longer an in vitro substrate for Hsl1, whereas this
C-terminal fragment alone is an efficient substrate for Hsl1, and the
phosphorylated residue lies in this short segment. However, we found
that the amino-terminal region of Hsl7 was required for its tight
binding to Hsl1. The simplest explanation for these observations is
that the amino-terminal region of Hsl7 contains a "docking site"
that mediates its high-affinity interaction with Hsl1 and is widely
separated (at least in terms of primary structure) from the
phosphoacceptor residues in Hsl7, a situation that has been observed
for many other protein kinase-substrate pairs (Bardwell et
al., 1996
). Hsl7(1-685) restores normal morphology to an
hsl7
mutant just as well as full-length Hsl7. One
interpretation of this result is that phosphorylation of Hsl7 by Hsl1
is dispensible for its function in the down-regulation of Swe1.
Alternatively, however, the missing C-terminal segment of Hsl7 could
normally be a negative regulatory domain and phosphorylation by Hsl1
(or removal by the truncation mutation) could alleviate its inhibitory constraint. In this regard, it is noteworthy that GFP-Hsl7(1-685) decorates the SPB more brightly than an otherwise identical GFP fusion
to full-length Hsl7. Also, GFP-Hsl7(1-685) more than occasionally decorates both SPBs (as well as the bud neck) well into S phase, whereas GFP-Hsl7 is removed from the SPB shortly after bud emergence and is localized thereafter exclusively at the bud neck. Even when
GFP-Hsl7 is rampantly overproduced, causing some of it to remain at the
SPB during S phase, it localizes asymmetrically, i.e., to only one end
of the premitotic spindle, unlike Hsl7(1-685). Thus, the C-terminal
segment of Hsl7 (and/or its phosphorylation by Hsl1) may have some role
in regulating or restricting the degree of Hsl7 association with SPBs.
Sequential Localization of Key Cell Cycle Regulatory Components at the SPB
We have shown here that Hsl7 is displaced from the bud neck during
late anaphase, relocates to the outer plaque of the SPB at late
telophase-early G1, and remains at the SPB until G1/S (or until S/G2,
in the case where Hsl7 is overexpressed or deprived of its C-terminal
segment). To our knowledge, this G1-specific pattern of SPB decoration
is unique to Hsl7. Other proteins that play a role in cell cycle
regulation, like certain components of the mitotic exit network (such
as Cdc15 and Tem1), also have been shown recently to localize
transiently to the outer plaque of the SPB (Cenamor et al.,
1999
; Bardin et al., 2000
; Pereira et al., 2000
;
Xu et al., 2000
), but this association occurs specifically in M phase. Appearance of Tem1, a small GTPase, at the SPB (Bardin et al., 2000
) seems to correspond in timing to the
disappearance of Hsl7 from the SPB in our experiments. Given that Hsl7
is a premitotic marker and Tem1 is mitotic marker of the SPB, it is tempting to speculate that displacement of Hsl7 might be required before efficient recruitment of Tem1 and, thus, that sequential localization of proteins to the SPB plays a role in optimizing coordination of nuclear dynamics with events (like assembly of the
septin-based cytokinesis apparatus) occurring at the cell cortex.
Indeed, two regulators involved in the exit from mitosis, the Cdc5 and
Cdc15 protein kinases, as well as the type I phosphoprotein phosphatase, Glc7, localize sequentially during mitosis, first to the
SPB and, late in mitosis, to the site of cytokinesis (Bloecher and
Tatchell, 2000
; Song et al., 2000
; Xu et al.,
2000
). Our experiments with the use of a temperature-sensitive
cdc15 mutant suggest that Cdc15 function per se is not
required for localization of Hsl7 to the SPB, but rather that release
of Hsl7 from the septin ring and its relocation to SPB requires
efficient mitotic exit. Nonetheless, it is noteworthy that
disappearance of Cdc15 from the SPB and its appearance at the bud neck
(Xu et al., 2000
) are correlated with the appearance of Hsl7
at the SPB and its disappearance from the septin scaffold before
cytokinesis. Degradation of Hsl1 by the APC (Burton and Solomon, 2000
)
is sufficient to explain displacement of Hsl7 from the bud neck during
anaphase. Consistent with this conclusion, in temperature-sensitive
mutants that inactivate the APC, GFP-Hsl7 remained anchored at the
septin rings and did not associate detectably with the SPB. Our studies
and those of others cited immediately above provide substantial
evidence that successive movements of signaling proteins from the SPB
to the bud neck constitute part of the control mechanisms that properly
integrate nuclear dynamics with cortical events during the cell
division cycle.
We have demonstrated that Hsl7 accumulates at two different subcellular
locations: on the daughter cell-side of the bud neck during cell
division, where it physically associates with Hsl1; and on the
cytoplasmic face of the SPB before mitosis in an Hsl1-independent manner. When situated at the bud neck, Hsl7 participates in processes that lead to the timely and catastrophic destruction of Swe1 (McMillan et al., 1999
; Shulewitz et al., 1999
).
Conversely, cells that maintain high Swe1 levels are unable to enter
mitosis and arrest in G2 as a consequence of sustained tyrosine
phosphorylation of the B-cyclin/CDK (Clb/Cdc28) complex (Lew, 2000
).
Inhibiting Clb/Cdc28 activity by overexpression of Swe1 (Booher
et al., 1993
), by depletion of B-type cyclins (Fitch
et al., 1992
; Nasmyth, 1993
), or by failure to degrade the
Clb/Cdc28-specific CDK inhibitor Sic1 (Verma et al., 1997
)
arrests cells before the onset of mitosis and has two strikingly
diagnostic consequences: 1) blockade of SPB separation, arresting
nuclear dynamics with side-by-side SPBs and preventing the formation of
the short (premitotic) spindle (Lim et al., 1996
); and 2) a
pronounced delay in shifting from polarized to isotropic growth of the
bud, leading to the appearance of markedly elongated buds (Lew and
Reed, 1993
). Thus, active Clb/Cdc28 is essential both for SPB
separation and for the switch from polarized to isotropic growth,
suggesting that specific targets for Clb/Cdc28 are found at those
subcellular locations. Our earlier work (Shulewitz et al.,
1999
) and the data presented here demonstrate that assembly of
Hsl7-Hsl1 complexes at the bud neck is required for timely and
efficient inactivation of the majority of the cellular content of Swe1
to promote the G2-M transition. Likewise, the role of Hsl7 at the SPB
(perhaps in conjunction with an SPB-associated protein kinase) may be
to bring about the early and highly localized inactivation of a small
pool of Swe1 (or some other target), thereby allowing a commensurately
small and localized pool of Clb/Cdc28 to act. If correct, this kind of
highly localized action many be one of the molecular mechanisms that
cells use to ensure that the events of the cell cycle are optimally
coordinated both spatially and temporally.
| |
ACKNOWLEDGMENTS |
|---|
We thank John Kilmartin, Tim Huffaker, Dave Morgan, Waheeda Khalfan, Becky Davis, Mark Rose, Sofie Salama, Curt Wittenberg, Yoshimi Takai, Tim Durfee, Janet Burton, and Mark Solomon for plasmids, strains, and/or antibodies; and Carla J. Inouye for constructing plasmid pGEM-5Z-HSL7. This work was supported by postdoctoral fellowships from the Madrid Educational Exchange Commission/Fulbright Foundation and the Del Amo Foundation (to V.J.C.), by predoctoral traineeships GM-07032 and CA-09041 and a William V. Power Graduate Fellowship (to M.J.S.); and by National Institutes of Health Research Grant GM-21841 and facilities provided by the Berkeley campus Cancer Research Laboratory (to J.T.).
| |
FOOTNOTES |
|---|
These authors contributed equally to this work.
Present address: Department of Microbiology II,
University of Madrid Complutense, 28040 Madrid, Spain.
Corresponding author. E-mail address:
jeremy{at}socrates.berkeley.edu.
| |
ABBREVIATIONS |
|---|
Abbreviations used: CDK, cyclin-dependent protein kinase; Cy3, indocarbocyanine dye; Gal, galactose; GFP, Aequorea victoria green fluorescent protein; GST, Schistosoma japonicum glutathione S-transferase; HA, influenza virus hemagglutinin; mAb, monoclonal antibody; PBS, phosphate-buffered saline; PCR, polymerase chain reaction; PRMT, S-adenosylmethionine-dependent protein-arginine methyltransferase; Raf, raffinose; SPB, spindle pole body.
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