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Vol. 13, Issue 9, 3148-3161, September 2002
The Atlantic Research Centre, Departments of Pediatrics and Biochemistry and Molecular Biology, IWK Health Centre, Dalhousie University, Halifax, Nova Scotia, B3H 4H7 Canada
Submitted November 6, 2001; Revised June 5, 2002; Accepted June 20, 2002| |
ABSTRACT |
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Phosphatidylcholine and phosphatidylethanolamine are the two
main phospholipids in eukaryotic cells comprising ~50 and 25% of
phospholipid mass, respectively. Phosphatidylcholine is synthesized almost exclusively through the CDP-choline pathway in essentially all
mammalian cells. Phosphatidylethanolamine is synthesized through either
the CDP-ethanolamine pathway or by the decarboxylation of
phosphatidylserine, with the contribution of each pathway being cell
type dependent. Two human genes, CEPT1 and CPT1, code for the total
compliment of activities that directly synthesize phosphatidylcholine and phosphatidylethanolamine through the CDP-alcohol pathways. CEPT1
transfers a phosphobase from either CDP-choline or CDP-ethanolamine to
diacylglycerol to synthesize both phosphatidylcholine and
phosphatidylethanolamine, whereas CPT1 synthesizes phosphatidylcholine
exclusively. We show through immunofluorescence that brefeldin A
treatment relocalizes CPT1, but not CEPT1, implying CPT1 is found in
the Golgi. A combination of coimmunofluorescence and subcellular
fractionation experiments with various endoplasmic reticulum, Golgi,
and nuclear markers confirmed that CPT1 was found in the Golgi and
CEPT1 was found in both the endoplasmic reticulum and nuclear
membranes. The rate-limiting step for phosphatidylcholine synthesis is
catalyzed by the amphitropic CTP:phosphocholine cytidylyltransferase
, which is found in the nucleus in most cell types.
CTP:phosphocholine cytidylyltransferase
is found immediately
upstream cholinephosphotransferase, and it translocates from a soluble
nuclear location to the nuclear membrane in response to activators of
the CDP-choline pathway. Thus, substrate channeling of the CDP-choline
produced by CTP:phosphocholine cytidylyltransferase
to nuclear
located CEPT1 is the mechanism by which upregulation of the CDP-choline
pathway increases de novo phosphatidylcholine biosynthesis. In
addition, a series of CEPT1 site-directed mutants was generated that
allowed for the assignment of specific amino acid residues as
structural requirements that directly alter either phospholipid head
group or fatty acyl composition. This pinpointed glycine 156 within the
catalytic motif as being responsible for the dual CDP-alcohol
specificity of CEPT1, whereas mutations within helix 214-228 allowed
for the orientation of transmembrane helices surrounding the catalytic site to be definitively positioned.
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INTRODUCTION |
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Phospholipids are the major components of cellular
membranes. Phosphatidylcholine (PtdCho) and phosphatidylethanolamine
(PtdEtn) are the two most abundant phospholipids present in eukaryotic cell membranes, comprising ~50 and 25% of phospholipid mass,
respectively (Raetz, 1986
; Zinser et al., 1991
; Schneiter
et al., 1999
). Both PtdCho and PtdEtn are actively
metabolized through both agonist stimulated and constitutive processes
to release a plethora of biologically active molecules, including
arachidonic acid for the synthesis of the inflammatory mediators
prostaglandins and leukotrienes, and diacylglycerol for the activation
of signaling molecules, which include members of the protein kinase C
family (Hodgkin et al., 1998
; Parekh et al.,
2000
). In the face of this complex metabolic regulation the levels of
PtdCho and PtdEtn remain essentially unchanged, because the cell is
capable of responding to alterations in lipid catabolism through
increases in synthesis and subsequent transport of lipids from their
site of synthesis to the intracellular destination at which the lipid
has been catabolized. Indeed, in any model of intracellular lipid
homeostasis one must couple lipid metabolism at a particular site
within the cell to increased de novo lipid synthesis and targeted
transport of the lipid to the site of its catabolism. The regulation of
lipid transport may overlap with vesicle trafficking processes; indeed,
the major cellular phospholipid PtdCho is believed to be inhibitory to
fission of vesicles from the Golgi (Xie et al., 2001
),
whereas its metabolites phosphatidic acid and diacylglycerol appear to
be positive regulators of vesicle transport (Bi et al.,
1997
; Kearns et al., 1997
; Schmidt et al., 1999
;
Weigert et al., 1999
; Siddhanta et al., 2000
;
Henneberry et al., 2001
; Bankaitis, 2002
; Baron and
Malhotra, 2002
). Research into the transport of the major membrane
lipids PtdCho and PtdEtn has been hampered by a lack of knowledge with
regard to precise sites of synthesis of these lipids within the cell.
PtdCho is synthesized almost exclusively through the CDP-choline
pathway in all mammalian cell types (except the liver; Figure 1; Cui et al., 1993
; Kent,
1995
; Walkey et al., 1998
). The first step in the synthesis
of PtdCho through the CDP-choline pathway is the phosphorylation of
choline by a cytoplasmic choline kinase to form phosphocholine. In the
second step, CMP is transferred from CTP to phosphocholine to form
CDP-choline by the rate-limiting CTP:phosphocholine
cytidylyltransferase (CT). There are two isoforms of CT found in
mammalian cells, with CT
being ubiquitous and likely the major
contributor to PtdCho synthesis in most cell types, whereas the second
CT isoform, CT
, is found in a much more restricted tissue
distribution. (Wang et al., 1993
; Kent, 1995
; Wang et
al., 1995
; Lykidis et al., 1998
; Northwood et
al., 1999
; Cornell and Northwood, 2000
; DeLong et al.,
2000
; Ridsdale et al., 2001
). CT
is directed to the
nucleus in most mammalian cell types including the Chinese hamster
ovary cells (CHO) cells used in this study by a basic motif found in
its N-terminal region, whereas CT
is extranuclear in all cell types
thus far examined (Wang et al., 1993
, 1995
; Lykidis et
al., 1998
; Northwood et al., 1999
; DeLong et
al., 2000
). The final step in the synthesis of PtdCho is catalyzed
by a cholinephosphotransferase activity that transfers phosphocholine
from CDP-choline to diacylglycerol to form PtdCho (Weiss et
al., 1958
; Hjelmstad and Bell, 1987
, 1988
; McMaster and Bell,
1994a
; Williams and McMaster, 1998
; Henneberry and McMaster, 1999
;
Mancini et al., 1999
; Henneberry et al., 2000
). The intracellular location of the cholinephosphotransferase reaction defines the site of PtdCho synthesis.
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PtdEtn is synthesized through an analogous pathway using a soluble
ethanolamine kinase to produce phosphoethanolamine, which is converted
by an endoplasmic reticulum bound CTP:phosphoethanolamine cytidylyltransferase to CDP-ethanolamine. Phosphoethanolamine is
transferred from CDP-ethanolamine to diacylglycerol by an
ethanolaminephosphotransferase activity of unknown intracellular
location to produce PtdEtn. (Hjelmstad and Bell, 1990
, 1991a
, 1991b
;
Kent, 1995
; Henneberry and McMaster, 1999
; Birner et al.,
2001
). PtdEtn can also be synthesized by the decarboxylation of
phosphatidylserine with the contribution of the CDP-ethanolamine versus
phosphatidylserine decarboxylation pathways being cell type dependent
(Voelker, 1984
; McMaster and Choy 1992
; Shiao et al., 1995
).
Our laboratory recently identified the first mammalian
cholinephosphotransferase and ethanolaminephosphotransferase encoding
cDNAs (Henneberry and McMaster, 1999
; Henneberry et al., 2000
). CPT1 codes for a CDP-choline specific cholinephosphotransferase for the exclusive synthesis of PtdCho, whereas CEPT1 codes for a dual
specificity choline/ethanolaminephosphotransferase that can use both
CDP-choline and CDP-ethanolamine as substrates to synthesize both
PtdCho and PtdEtn. An analysis of the human genome and those of other
eukaryotic cells indicates that these two genes likely code for the
entire set of cholinephosphotransferases and ethanolaminephosphotransferases in mammalian cells. Genetic
inactivation of the analogous genes in yeast resulted in complete loss
of both enzyme activities in vitro and an inability to metabolically
reconstitute lipid synthesis by either route in vivo (McMaster and
Bell, 1994a
, 1994b
; Hjelmstad and Bell, 1991a
; Hjelmstad et
al.; 1994
). Human CEPT1 and CPT1, by virtue of their choice
in diacylglycerol fatty acyl and CDP-alcohol species, affect the form
and function of PtdCho and PtdEtn (Samborski et al., 1990
;
DeLong et al., 1999
; Hunt et al., 2001
; Jansen
et al., 2001
). In this study we have pinpointed the sites of
PtdCho and PtdEtn synthesis in mammalian cells. We have also taken
advantage of the dual CDP-alcohol specificity of CEPT1 to identify
amino acid residues that determine its ability to synthesize PtdCho
versus PtdEtn and have identified amino acid residues that alter its
diacylglycerol fatty acyl species preference.
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MATERIALS AND METHODS |
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Materials
[Methyl-14C]Cytidine 5'-diphosphocholine
and [ethanolamine 1,2-14C]cytidine
5'-diphosphoethanolamine were purchased from American Radiolabeled
Chemicals (St. Louis, MO).
[Methyl-14C]-choline chloride was purchased
from NEN Life Science Products (Boston, MA). [Ethanolamine
1,2-14C]-ethanolamine hydrochloride was
purchased from ICN (Costa Mesa, CA). All materials used in the
preparation of bacterial and yeast media were purchased from Difco
Laboratories (Detroit, MI). Lipids were purchased from Avanti Polar
Lipids (Birmingham, AL). The T7 mouse mAb and T7 mouse mAb conjugated
to horseradish peroxidase were purchased from Novagen (Madison, WI).
The anticalnexin rabbit polyclonal antibody was a product of StressGen
Biotechnologies Corp (Victoria, British Columbia, Canada). The Lap-2
mouse mAb was purchased from Transduction Laboratories (Lexington, KY). The CT
rabbit polyclonal antibody was a gift from Dr. Martin Post
(Hospital for Sick Children, Toronto, Canada). FITC-labeled Lens
culinaris (LcH) lectin was purchased from Sigma (St. Louis, MO).
Goat anti-mouse Texas Red, goat anti-rabbit Texas Red, goat anti-mouse
FITC, and goat anti-rabbit FITC secondary antibodies were products of
Molecular Probes (Eugene, OR).
Generation of Constructs for Expression in Mammalian Cells
Human CEPT1 was amplified by PCR from our original cDNA using the oligonucleotide primers, 5'-GCGGGATCCATGAGTGGGCATCGATCAACA-3' (forward) and 5'-GCGGTCGACTTAATGATTAGAATGAGCTGT-3' (reverse), which contain BamHI and SalI restriction sites, respectively. The PCR product was subcloned into the pCR2.1-Topo vector (Invitrogen, Carlsbad, CA), excised with BamHI and SalI and subcloned into the Escherichia coli expression vector pET23a (Novagen), resulting in the addition of an 11-residue, T7 epitope tag to the N-terminus of the protein. The T7-tagged version of CEPT1 was excised using BglII and SalI and subcloned into the BamHI and SalI sites of the mammalian expression vector pcDNA3 (Invitrogen). GFP was added to the C terminus of T7-tagged CEPT1 by amplification of CEPT1 by PCR using the oligonucleotide primers, 5'-GCAAGATCTATGGCTAGCATGACTGGTGGA-3' (forward) and 5'-GCGCAGAATTCGATGATGATTAGAATGAGC-3' (reverse), which have BglII and EcoRI restriction sites, respectively, built into the primers, and subcloned into the BglII and EcoRI sites of the mammalian expression vector pEGFP-N1 (Clontech, Palo Alto, CA). Expression of this construct in mammalian cells results in the production of a CEPT1 protein with an N-terminal T7 epitope tag and a C-terminal green fluorescent protein (GFP).
The open reading frame of human CPT1 was amplified by PCR using the oligonucleotide primers 5'-GCCAGATCTATGGCGGCGGCGCCGGGGCC-3' (forward) and 5'-GCCGTCGACTCAATCCATGTTATTCTGATG-3' (reverse), which have BglII and SalI restriction sites, respectively, and subcloning into the TA cloning into the pCR2.1-TOPO (Invitrogen). The BglII/SalI fragment was excised and subcloned into the BamHI and SalI sites of the pET23a vector, resulting in the addition of a T7 epitope tag to the N-terminus of CPT1. The T7-tagged version of CPT1 was digested with BglII and NotI and subcloned into the BamHI and NotI restriction sites of pcDNA3 (Invitrogen). The DNA sequence of all PCR-amplified constructs was confirmed by sequencing both DNA strands.
Site-directed mutants were made using the MORPH site-directed mutagenesis kit (5 Prime 3 Prime, Inc., West Chester, PA). Mutagenic oligonucleotides were 5'-phosphorylated and purchased from Life Technologies (Rockville, MD). Mutations were confirmed by manual dideoxy sequencing using the T7sequencing kit (Amersham Pharmacia Biotech, Piscataway, NJ).
Cell Culture
CHO-K1 cells were transiently transfected using LIPOFECTAMINE Reagent (Life Technologies) in DMEM containing 5% (vol/vol) fetal calf serum and 33 µg/ml proline and maintained at 37°C in an atmosphere of 5% CO2.
The calcium chloride method of cell transfection was used for the preparation of stable cell lines in 100-mm dishes. Transfected cells were incubated overnight at 37°C in DMEM containing 5% (vol/vol) fetal calf serum and 33 µg/ml proline. Medium was replaced with 8 ml of CHO-K1 media containing 500 µg/ml G418 to start selection of stably transfected clones. Subsequently, the medium was replaced every 2-3 d with 8 ml of fresh CHO-K1 medium containing 500 µg/ml G418 to select for clones that were stably transfected with the desired plasmid. Single colonies of stably transfected CHO-K1 cells were selected by dilution cloning. Positive colonies were initially identified by Western blotting with the T7-horseradish peroxidase-conjugated antibody and their homogeneity confirmed by immunofluorescence.
Immunofluorescence
All cells used for immunofluorescence were grown on glass
coverslips in 60-mm dishes at a density of 2 × 105 cells per dish. Cells were fixed in 3%
(vol/vol) formaldehyde in 10 mM sodium phosphate (pH 7.4), 225 mM NaCl,
2 mM MgCl2 (PBS-B) for 15 min at room
temperature. The coverslips were washed twice at room temperature with
PBS-B containing 5 mM ammonium chloride for 5 min each wash, with PBS-B
for 5 min, and then permeabilized by adding PBS-B containing 0.05%
Triton X-100 and incubating at 40°C for 15 min and then room
temperature for 15 min. The coverslips were washed twice with PBS-B
containing 1% fatty acid-free BSA (PBS/BSA) for 5 min per wash, once
for 15 min, and treated with primary antibody in PBS/BSA for 1 h
at room temperature. The coverslips were washed twice with PBS/BSA for
5 min each. LcH-lectin (which was conjugated directly to FITC) and
secondary antibody was added in PBS/BSA, and cells were incubated for
1 h at room temperature and washed twice with PBS/BSA for 5 min
each, and the coverslips were mounted on slides with 2.5% (wt/vol)
1,4-diazadicyclo-[2,2,2]-octane in 50 mM Tris-HCl (pH 9.0) and 90%
(vol/vol) glycerol. T7 antibodies were used at 1:1000 dilution, CT
antibodies at 1:4000, and calnexin antibodies at 1:200. Secondary
antibodies and FITC-coupled LcH-lectin were used at a 1:4000 dilution.
Very faint intranuclear staining was observed with the T7 mAb in
mock-transfected cells.
To stain the mitochondria, cells were grown on glass coverslips as described above. Before fixing, the medium was aspirated from the cells and replaced with fresh CHO-K1 medium containing 200 nM MitoTracker Red CMXRos (Molecular Probes). The cells were incubated with the dye for 45 min at 37°C and washed twice with warm PBS. Cells were fixed and mounted as described above.
Cells transiently transfected with GFP-fusion and YFP-fusion proteins
were grown on glass coverslips, washed three times with 58 mM
Na2HPO4, 17 mM
NaH2PO4, 68 mM NaCl (PBS-C,
pH 7.4), and either viewed directly or fixed by incubating with
PBS-C/4% formaldehyde for 30 min at room temperature, washed twice
with PBS-C, and mounted as described above. The YFP-Golgi marker is a
fusion protein consisting of enhanced yellow fluorescent protein and
the sequence encoding the N-terminal 81 amino acids of human
-1,4-galactosyltransferase (Clontech).
Fluorescence microscopy was performed using a Zeiss axiophot microscope (Thornwood, NY). Green and yellow fluorescent proteins and FITC-coupled antibodies were visualized with Zeiss filter number 10, which excites at 450/490 and emits at 550/565. Texas Red and MitoTracker were visualized with Zeiss filter number 15, which excites at 546/560 and emits at 590.
Nuclear Fraction Isolation
NE-PER Nuclear and Cytoplasmic Extraction Reagents Kit (Pierce,
Rockford, IL) was used to isolate nuclei. We seeded 5 × 105 CHO cells in a 100-mm plate containing DMEM
with 5% (vol/vol) fetal calf serum and 33 µg/ml proline and
maintained at 37°C. The cells were maintained in an atmosphere of 5%
CO2 for 4 d. The plates were placed on ice,
and the medium was aspirated. The cells were scraped into 1 ml ice-cold
PBS and spun at 500 × g at 4°C for 3 min. The PBS
was aspirated, and the cell pellet was resuspended in 200 µl
cytoplasmic extraction reagent I. The sample was vortexed at the
highest setting for 15 s to fully resuspend the cell pellet. The
sample was incubated on ice for 10 min, and 11 µl cytoplasmic
extraction reagent II was added. The sample was vortexed 5 s and
incubated on ice for 1 min. The sample was vortexed 5 s on the
highest setting and then spun at 16,000 × g and 4°C for 5 min.
The supernatant was transferred to a new, precooled tube and mixed with
an equal volume of SDS-loading buffer. The pellet was resuspended in
100 µl nuclear extraction reagent. The sample was vortexed for
15 s and incubated on ice for 10 min. This was repeated for a
total of 40 min. The sample was spun at 16,000 × g and
4°C for 10 min. The supernatant was transferred to a new, precooled
tube and then mixed with an equal volume of SDS-loading buffer. Samples
were stored at
20°C. A 20-µl sample of nuclear and extranuclear
extracts was loaded and proteins separated by SDS-PAGE and identified
by Western blot.
Western Blot Analysis
HJ091 Saccharomyces cerevisiae cells (a
his3-
1 leu2-3 leu2-112 ura3-52 trp1-289 cpt1::LEU2
ept1
) were grown to midlog phase in synthetic
dextrose medium containing the appropriate nutrients to ensure plasmid
maintenance (Kaiser et al., 1994
), and microsomal membranes
were prepared as described (Williams and McMaster, 1998
). Protein
extracts were incubated with SDS-PAGE sample buffer at 37°C for 30 min, separated on a 12% SDS-polyacrylamide gel, and transferred to
polyvinylidene difluoride membranes. Blots were probed with a T7
epitope tag-specific mAb coupled directly to horseradish peroxidase
(1:5000, Novagen) for subsequent detection using the ECL system
(Amersham Pharmacia Biotech).
Enzyme Assays
To determine in vitro choline- and
ethanolaminephosphotransferase enzyme activities of wild-type and
site-directed CEPT1 mutants the microsomal membranes were isolated from
HJ091 yeast (cpt1::LEU2 ept1
)
grown to midlog phase in synthetic dextrose media containing the
appropriate nutrients to ensure plasmid maintenance of wild-type or
mutant versions of CEPT1 from the constitutive
glyceraldehyde-3-phosphate dehydrogenase promoter in the expression
vector p416GPD (Munberg et al., 1995
). A mixed micelle assay
was used as previously described (Henneberry et al., 2001
;
Wright et al., 2001
). All assays were performed at least
three times in duplicate and the indicated values represent their mean.
SEs were <15% of the mean for each experiment.
Cholinephosphotransferase and ethanolaminephosphotransferase activities
in CHO-K1 cell lines and CHO-K1 cells transiently transfected with
CEPT1-GFP were determined after placing the cells on ice and washing
them twice with ice-cold PBS. The cells were scraped into a microfuge
and centrifuged at 15,000 × g for 5 min at 4°C. The
cell pellet was resuspended in 0.5 ml of 10 mM HEPES-HCl (pH 7.4), 50 mM KCl, 1 mM EDTA, and Complete protease inhibitor cocktail (Roche
Molecular Biochemicals, Indianapolis, IN)) and passed through a
23-gauge needle 20 times to lyse the cells. The mixture was centrifuged
at 15,000 × g for 30 s at 4°C, and the supernatant was centrifuged at 450,000 × g for 15 min
at 4°C to pellet cellular membranes. Membranes were resuspended in 10 mM HEPES-HCl (pH 7.4), 50 mM KCl, 1 mM EDTA, and Complete protease inhibitor cocktail (Roche Molecular Biochemicals) by using a Teflon pestle and stored at
70°C. The mixed micelle assay for
cholinephosphotransferase activity was used as previously described
(Henneberry et al., 2001
; Wright et al., 2001
).
Metabolic Labeling
S. cerevisiae HJ091 cells (cpt1::LEU2
ept1
) transformed with either wild-type or
mutant versions of CEPT1 in the constitutive expression vector p416GPD
were grown to midlog phase in synthetic dextrose media containing the
appropriate nutrients to ensure plasmid maintenance (Kaiser et
al., 1994
). [14C]Choline (10 µM, 1 × 105 dpm/nmol) or
[14C]ethanolamine (6.7 µM, 2.2 × 105 dpm/nmol) was added to the cultures for
1 h at 30°C. Cells were then concentrated by centrifugation and
incorporation of radiolabel into lipids was performed as described
(Henneberry et al., 2001
). All labeling experiments were
performed at least three times in duplicate and the values indicated
represent their mean. SEs were <15% of the mean for each experiment.
Protein and Lipid Determination
Protein was determined by the method of Lowry et al.
(1951)
using bovine serum albumin as standard. Phospholipid phosphorus was determined by the method of Ames and Dubin (1960)
.
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RESULTS |
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Sites of PtdCho and PtdEtn Synthesis
The CEPT1 open reading frame was fused with that of the GFP, and
this construct was transiently transfected into Chinese hamster ovary
(CHO-K1) cells. The CEPT1-GFP chimeric protein was functional as cells
transiently transfected with CEPT1-GFP at 20% efficiency had a
fourfold increase in cholinephosphotransferase activity. Indeed,
transfection efficiency of CEPT1-GFP essentially mirrored the increase
in cholinephosphotransferase activity, implying that all of the
CEPT1-GFP fusion protein was enzymatically active (our unpublished
results). As an initial step in determining the intracellular site of
CEPT1 we treated the cells with brefeldin A, which essentially collapses the Golgi apparatus into the endoplasmic reticulum, resulting
in a dramatic relocalization of most Golgi resident proteins. Brefeldin
A treatment did not result in the relocalization of CEPT1, whereas the
Golgi marker was effectively relocalized (Figure
2A). Similar results were observed
whether live cells were viewed or if cells were fixed before microscopy
(our unpublished results).
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To further define the intracellular site of CEPT1 and CPT1, stable
CHO-K1 cell lines expressing T7-epitope-tagged CEPT1 and CPT1 were
constructed. These same T7-tagged CEPT1 and CPT1 proteins expressed in
yeast devoid of their endogenous cholinephosphotransferase and
ethanolaminephosphotransferase activities were previously used to
characterize the substrate specificity of the CEPT1 and CPT1 enzymes in
vitro by enzyme assay and in vivo through metabolic labeling
experiments (Henneberry and McMaster, 1999
; Henneberry et
al., 2000
). In addition, increased expression of T7-tagged CEPT1
was demonstrated to prevent farnesol induced inhibition of
cholinephosphotransferase activity in CHO-K1 cells, once again demonstrating that the tagged versions of these enzymes are active and
can reconstitute the CDP-alcohol pathways in a variety of eukaryotic
cell types, indicating they are properly localized (Wright et
al., 2001
). We isolated five CHO-K1 cell lines expressing T7-tagged CEPT1 or CPT1 that possessed barely perceptible increases in
CEPT1 and CPT1 enzyme activity compared with those with up to fivefold
increased expression of CPT1 or CEPT1. We found that the level
of expression of CPT1 and CEPT1 did not alter their intracellular
locations (our unpublished results), and representative images of cell
lines with an estimated twofold increase in CEPT1 and CPT1 expression
are presented (Figures 2 and 3).
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Brefeldin A treatment of CHO cells expressing T7-CPT1 resulted in a redistribution of CPT1 from a large punctate region to a more diffuse region (Figure 2B). This implies that CPT1 synthesizes PtdCho in the Golgi apparatus.
Coimmunofluorescence of CPT1 and CEPT1 with organelle-specific markers
was performed. CPT1 colocalized with the Golgi-specific L. culinaris lectin (Ridgway et al., 1992
) and was
independent of the endoplasmic reticulum and mitochondrial markers
(Figure 3). This was consistent with the redistribution of CPT1 in
response to brefeldin A treatment. The CEPT1 protein colocalized with
the endoplasmic reticulum marker calnexin and was not found colocalized with the Golgi or mitochondrial markers (Figure
4). The CEPT1-GFP chimera was also found
to colocalize with the endoplasmic reticulum resident protein disulfide
isomerase (our unpublished results).
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Reconstitution of the PtdCho Biosynthetic Pathway
Closer observation of the merged CEPT1/calnexin image resulted in
our observance of a small region around the nuclear membrane that did
not appear to completely merge with the endoplasmic reticulum marker.
The synthesis of CDP-choline for consumption by
cholinephosphotransferase is the rate-limiting step in the synthesis of
PtdCho and is catalyzed by a pair of CTP:phosphocholine
cytidylyltransferase (CT) enzymes. CT
is the main isoform present in
most cell types including CHO cells (Wang et al., 1995
;
Lykidis et al., 1998
; Attard et al., 2000
;
Cornell and Northwood, 2000
), and upon activation of PtdCho synthesis (e.g., through fatty acid supplementation) CT
translocates to the nuclear membrane (Watkins and Kent, 1992
; Wang et
al., 1993
, 1995
; Northwood et al., 1999
; Cornell and
Northwood, 2000
; DeLong et al., 2000
; Ridsdale et
al., 2001
). In our hands, activation of CT
also resulted in its
colocalization to the nuclear membrane, and this overlapped with the
portion of CEPT1 that did not colocalize with the endoplasmic reticulum
(Figure 5A). To ensure that a portion of
CEPT1 was indeed associated with the nuclear membrane, we separated CHO-K1 cellular nuclei from endoplasmic reticulum by subcellular fractionation. The nuclei are clearly separated from the endoplasmic reticulum because the endoplasmic reticulum marker calnexin is found
exclusively in the extranuclear fraction, whereas the nuclear membrane
marker Lap-2 is found exclusively in the nuclear fraction. Similar to
our coimmunofluorescence experiments, the bulk of CEPT1 was associated
with the extranuclear fraction, whereas a smaller proportion was found
in the nucleus. These experiments demonstrate that CEPT1 resides in
both the endoplasmic reticulum and nuclear membranes, and increasing
PtdCho synthesis via CT
translocation is by redistribution of this
rate-limiting enzyme to nuclear located CEPT1. However, whether CEPT1
and CT
reside within the same nuclear membrane and/or directly
interact will require further experimentation.
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Structure/Function Analysis of CEPT1
The first genes identified to code for cholinephosphotransferase
and ethanolaminephosphotransferase activities were isolated from the
yeast S. cerevisiae (Hjelmstad and Bell 1987
, 1988
, 1990
, 1991a
). The yeast CPT1 gene product utilizes CDP-choline in
vitro and in vivo, whereas the EPT1 gene product can use
both CDP-choline and CDP-ethanolamine (Hjelmstad and Bell 1990
, 1991a
,
1991b
; Hjelmstad et al., 1994
; McGee et al.,
1994a
, 1994b
; McMaster and Bell, 1994a
, 1994b
; Henneberry
et al., 2001
). Genetic inactivation of the CPT1 and EPT1 genes resulted in the complete loss of measurable
cholinephosphotransferase and ethanolaminephosphotransferase in vitro
enzyme activity and an inability to incorporate specific radiolabeled
precursors for each pathway into either PtdCho or PtdEtn (Hjelmstad and
Bell, 1991b
; Hjelmstad et al., 1994
; McMaster and Bell,
1994a
, 1994b
; Henneberry et al., 2001
). Inactivation of the
both CDP-alcohol pathways in most cell types would be lethal; however,
yeast cells are still viable because they can de novo synthesize
phosphatidylserine, which can be decarboxylated to PtdEtn and
methylated to PtdCho (Paltauf et al., 1992
; Birner et
al., 2001
). The ability of yeast to survive in the absence of
functional CDP-choline and CDP-ethanolamine pathways for PtdCho and
PtdEtn synthesis allowed for their use as a null expression system for
structure/function analysis of human CEPT1.
Extrapolation of previous chimeric enzyme analysis of the yeast Cpt1p
and Ept1p enzymes to human CEPT1 positions the outside limit of the
CDP-alcohol-binding region to amino acid residues 88-213, whereas the
diacylglycerol binding site is located to the transmembrane helices
spanning residues 88-258 (Figure 6; Hjelmstad et al., 1994
; McMaster and Bell, 1994a
). Within
this region is a CDP-alcohol phosphotransferase motif,
DG(x)2AR(x)8G(x)3D(x)3D, that runs from residues 136-158 in human CEPT1. The final two aspartates within this motif are required for catalysis with the remainder of the conserved residues responsible for substrate affinity
or steric stability (Williams and McMaster, 1998
). Secondary structure
predictions and hydropathy plots weave either three of four
membrane-spanning domains through the substrate binding region of the
yeast and human cholinephosphotransferases and
choline/ethanolaminephosphotransferases (Figure 6). Amino acids
residues within the CDP-alcohol phosphotransferase motif were changed
from those found in the dual specificity human CEPT1 and yeast Ept1p to
those found in CDP-choline-restricted human CPT1 and yeast Cpt1p
(Figure 7A) to determine if the divergent residues within this region impart CDP-alcohol specificity.
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CEPT1 CDP-Alcohol Site-directed Mutants
Plasmids carrying wild-type and site-directed mutants of CEPT1
were transformed into S. cerevisiae HJ091, a yeast strain
that is devoid of cholinephosphotransferase and
ethanolaminephosphotransferase activities due to inactivating mutations
within its endogenous CPT1 and EPT1 genes
(cpt1::LEU2 ept1
; Hjelmstad
and Bell, 1991a
; Hjelmstad et al., 1994
; McMaster and Bell,
1994a
). This expression system ensures that any
cholinephosphotransferase or ethanolaminephosphotransferase activity
detected would be plasmid encoded. Western blot analysis of HJ091
membrane fractions expressing the wild-type and mutant versions of
CEPT1 established that similar amounts of full-length enzyme were being
expressed (Figure 7B).
The CDP-alcohol specificities of CEPT1 and the CDP-alcohol
phosphotransferase motif mutants were determined by in vitro enzyme assay. There were very small differences in enzyme activity or CDP-alcohol specificity with the CEPT1 N144G, S146Q, or S146C mutations
compared with the wild-type enzyme (Figure
8). A decrease in both
cholinephosphotransferase and ethanolaminephosphotransferase activity
to ~50% wild-type activity was seen in the K138 M mutant; however,
this demonstrates an overall effect on activity but not substrate
specificity because use of both CDP-choline and CDP-ethanolamine as
substrates was equally affected. Mutation of glycine 156 to either
alanine, serine, or cysteine also decreased cholinephosphotransferase activity to 50% wild-type, but more importantly abolished the ability
of CEPT1 to utilize CDP-ethanolamine as a substrate (Figure 8).
Increasing the specific radioactivity of the CDP-ethanolamine substrate
to values 10-fold normally used still did not allow for detectable
enzyme activity. This indicates a specific role for glycine 156 in
CDP-ethanolamine binding by CEPT1.
|
To confirm the in vitro CDP-alcohol substrate specificity results, the
ability of wild-type and mutant versions of CEPT1 to reconstitute the
synthesis of PtdCho or PtdEtn from radiolabeled choline or
ethanolamine, respectively, was tested in S. cerevisiae HJ091 cells (cpt1::LEU2 ept1
).
All of the yeast expressing mutant CEPT1 proteins were able to take up
choline and synthesize PtdCho at levels similar to yeast expressing
parental CEPT1 (Figure 9A). All of the
yeast expressing mutant CEPT1 proteins were also capable of taking up ethanolamine at levels near to those expressing parental CEPT1; however, none of the CEPT1 proteins containing a substitution for
glycine 156 were able to reconstitute de novo PtdEtn synthesis (Figure
9B). Hence, the in vivo metabolic pathway reconstitution results for
the CEPT1 mutants were consistent with the in vitro assessment of their
CDP-alcohol specificities and further support a role for glycine 156 in
CEPT1 CDP-alcohol specificity for human CEPT1.
|
Identification of Diacylglycerol Fatty Acyl Specificity Residues
The 214-234 membrane spanning helix of CEPT1 lies within the
predicted diacylglycerol binding region of CEPT1 (Hjelmstad et al., 1994
; McMaster and Bell, 1994a
). N-terminal to residues
214-234 is a helix that spans residues 181-199 that is weakly
predictive to span the membrane. If helix 181-199 does indeed span the
membrane, then the orientation of helix 214-234 within the membrane
would be flipped (Figure 6). Because the incoming phosphobase is
transferred directly from the CDP-alcohol onto diacylglycerol without
going through a membrane-bound intermediate (Hirabayashi et
al., 1976
; Bae-Lee and Carman, 1984
; Pontoni et al.,
1985
; Raetz et al., 1987
; Williams and McMaster, 1998
), then
the relevant amino acids within helix 214-234 need to be in close
proximity to the soluble CDP-alcohol phosphotransferase motif. Because
diacylglycerol only spans half of the membrane bilayer, amino acid
residues that encompass the half of the membrane that interact with
diacylglycerol would have an effect on enzymatic activity and/or
diacylglycerol specificity, whereas residues mutated on the opposite
side of the helix would have little effect. A number of residues
spanning the entire membrane spanning 214-234 helix were targeted for
site-directed mutagenesis (Figure 10A)
to determine if residues within this helix interact with diacylglycerol
and to allow positioning of this helix in the active site of CEPT1
relative to the CDP-alcohol phosphotransferase motif.
|
Plasmids carrying wild-type CEPT1 and various helix 214-234 mutations
were transformed into S. cerevisiae strain HJ091
(cpt1::LEU2 ept1
). Western
blot analysis of HJ091 membrane fractions established that similar
levels of full-length CEPT1 protein were expressed (Figure 10B). The
cholinephosphotransferase activities of CEPT1 mutants were determined
by in vitro enzyme assay. The wild-type CEPT1 enzyme had a broad
diacylglycerol substrate specificity with di16:1
16:0/22:6
16:0/18:1
di18:1 > di10:0
16:0(O):20:4 (platelet activating factor [PAF] precursor). There was very little detectable activity toward di16:0, di14:0, or di12:0 diacylglycerols (Figure 10), and no activity was detected using 16:0(O):2:0 as substrate for the direct synthesis of PAF (our unpublished results). Each of the CEPT1 mutants was also analyzed for
cholinephosphotransferase activity using a wide variety of defined
diacylglycerols (Figure 11). A number
of the mutations, namely T214A, V216A, and I221A, altered the profile
of diacylglycerol utilization when compared with that of wild-type
CEPT1 and also resulted in modest reductions in enzyme activity. The
E215A, E215D, and E215Q mutations resulted in a much more dramatic
reduction in CEPT1 enzyme activity. E215A and E215D did not alter
diacylglycerol specificity, whereas the E215Q demonstrated altered
diacylglycerol specificity. In contrast, the mutations L226A and V228A
did not alter cholinephosphotransferase activity or diacylglycerol
specificity of CEPT1. These results indicate that residues 226 and 228 are located on the opposite side of the helix from the catalytic site,
whereas residues 214, 215, 216, and 221 are in close proximity to the
catalytic site. Based on these results, it is predicted that the model
proposed in Figure 5B is correct with regards to the orientation of
membrane spanning helix 214-234 to the CDP-alcohol phosphotransferase
motif.
|
| |
DISCUSSION |
|---|
|
|
|---|
PtdCho and PtdEtn comprise 50-75% of cellular phospholipid mass.
In this study we have identified the sites at which CEPT1 and CPT1, the
enzymes that directly synthesize these two lipids, reside and provided
molecular insights into specific amino acid determinants for both the
fatty acid and lipid head group specificity of CEPT1. CEPT1 is a dual
specificity enzyme that can synthesizes both PtdCho and PtdEtn, and
glycine 156 within the catalytic CDP-alcohol phosphotransferase motif
of CEPT1 was required for dual CDP-alcohol specificity. Any other amino
acid at this position resulted in a loss of
ethanolaminephosphotransferase activity by CEPT1. Mutagenesis of amino
acid residues within the predicted transmembrane helix 214-234 of
CEPT1 altered diacylglycerol substrate specificity, and enzyme activity
confirming this helix spans the membrane. Only mutations in residues
214-221 of this helix affected diacylglycerol substrate specificity
and enzyme activity, and because the phosphobase is transferred
directly from the CDP-alcohol onto diacylglycerol without passing
through an enzyme-bound intermediate (Hirabayashi et al.,
1976
; Bae-Lee and Carman, 1984
; Pontoni et al., 1985
; Raetz
et al., 1987
; Williams and McMaster, 1998
), the first half of helix 214-234 must juxtapose the CDP-alcohol-binding site. This
enabled the orientation of this diacylglycerol binding helix within the
membrane span to be accurately positioned.
Our study also provides formal proof that PtdCho and PtdEtn are de novo
synthesized at specific sites within the cell. CPT1 synthesizes PtdCho
exclusively and was found in the Golgi, whereas the dual specificity
CEPT1, which synthesizes both PtdCho and PtdEtn, was found in both
endoplasmic reticulum and nuclear membranes. The rate-limiting step in
the synthesis of PtdCho is catalyzed by CT
in most cell types and
produces the CDP-choline that is used by cholinephosphotransferase
activities to produce PtdCho. In most cell types, CT
is found in the
nucleus as an amphitropic protein that is stored as an inactive soluble
protein that translocates to the nuclear membrane to upregulate PtdCho
synthesis (Watkins and Kent, 1992
; Wang et al., 1993
, 1995
;
Northwood et al., 1999
; Cornell and Northwood, 2000
; DeLong
et al., 2000
; Ridsdale et al., 2001
). We
demonstrated that activation of CT
through translocation to the
nuclear membrane brings it into proximity with the nuclear membrane
portion of CEPT1. This demonstrates that the activation of the
CDP-choline pathway is likely through redistribution of the
rate-limiting penultimate enzyme to the site of the ultimate step
within the pathway. Whether CT
and CEPT1 reside in the same nuclear
bilayer and/or physically interact remains to be determined, as does
their colocalization with other upstream enzymes including CT
and
CTP:phosphoethanolamine cytidylyltransferase.
The role of diacylglycerol in the regulation of vesicle transport from
the Golgi is well established in yeast and mammalian cells. In
mammalian cells diacylglycerol production is required for recruitment
of the Golgi vesicle biogenesis factor protein kinase D to the
trans-Golgi network (Bankaitis, 2002
; Baron and Malhotra, 2002
). The
regulation of Golgi diacylglycerol levels thus appears to be an
important regulatory event in Golgi derived vesicle transport in
mammalian cells. Naturally, the production of diacylglycerol in the
Golgi for Golgi-derived vesicle transport must be balanced by
diacylglycerol clearance. Our identification of a Golgi specific
localization for mammalian CPT1 implies its consumption of
diacylglycerol could play a role in the regulation of Golgi derived
vesicle transport. A role for diacylglycerol consumption by the
CDP-choline pathway during de novo PtdCho biosynthesis is supported by
data obtained in yeast.
The yeast PtdCho/phosphatidylinositol transfer protein Sec14p
is a soluble protein that translocates to Golgi membranes, and ablation
of Sec14p function results in decreased Golgi-derived vesicle transport
that eventually results in cell death (Bankaitis et al.,
1989
; Bankaitis et al., 1990
; Cleves et al.,
1991
; Sha et al., 1998
). Genetic inactivation of the
CPT1-catalyzed step in the synthesis of PtdCho results in
bypass of the essential function of Sec14p and allows cells to now live
because of their ability to regain Golgi-derived vesicle transport.
Decreasing PtdCho synthesis and thus increasing diacylglycerol levels
by preventing its consumption through the CDP-choline pathway
suppresses the need for Sec14p in Golgi transport (McGee et
al., 1994a
, 1994b
; Xie et al., 2001
), implying
increased Golgi diacylglycerol promotes Golgi-derived vesicle transport
(Cleves et al., 1991
; Skinner et al., 1995
;
Kearns et al., 1997
; Sreenivas et al., 1998
; Xie et al., 1998
; Phillips et al., 1999
; Rivas
et al., 1999
; Henneberry et al., 2001
; Xu
et al., 2001
). However, inactivation of the EPT1 pathway for PtdCho synthesis does not bypass the ability of cells to
live in the absence of Sec14p, even if Ept1p is contributing to 50% of
net CDP-choline-derived PtdCho synthesis (Henneberry et
al., 2001
). Our determination that human CEPT1 resides in the endoplasmic reticulum and nuclear membrane, whereas human CPT1 is in
the Golgi, may provide an explanation for the ability of loss of
function of yeast CPT1, but not EPT1, to bypass
the essential function of Sec14p. Although speculative, if yeast Cpt1p
and Ept1p localize to similar intracellular locations as their
mammalian counterparts, then inactivation of yeast CPT1
would increase diacylglycerol and decrease PtdCho levels in the Golgi
and thus provide a favorable shift in Golgi lipid levels for bypass of
Sec14p function. Inactivation of EPT1 would primarily alter
endoplasmic reticulum and nuclear lipid levels and would not have
dramatic affects on Golgi diacylglycerol or PtdCho levels. Increased
expression of EPT1 (and human CEPT1) in yeast was able to
restore PtdCho synthesis to cells lacking their CPT1 gene,
and this also prevented bypass of loss of Sec14p function in yeast
carrying an inactivated CPT1 gene. We predict that increased
expression of Ept1p and human CEPT1 results in either the
mislocalization of a portion of these enzymes to the Golgi or drives
increased synthesis of endoplasmic reticulum PtdCho, which is then
transported to the Golgi. Our attempts to express human CPT1 in yeast
were at levels too low to allow for complete restoration of PtdCho
synthesis (Henneberry et al., 2000
), and this is likely why
human CPT1 was unable to bypass of the essential function of Sec14 due
to inactivation of yeast CPT1. The precise site of yeast
Cpt1p, Ept1p, and their human counterparts expressed in yeast is
currently under investigation.
In this study we have addressed a fundamental issue of cell biology, where are phospholipids made? We have also demarcated molecular determinants that define product formation. The sites of synthesis of PtdCho and PtdEtn is requisite knowledge for any model attempting to describe how these lipids are transported to other organelles for restoration of PtdCho and PtdEtn levels subsequent to their signal transduction-mediated catabolism or for providing new membrane for cell growth. The data have also added credence to the model that interprets how Golgi-derived vesicle transport may be regulated by the consumption of diacylglycerol during the formation of PtdCho.
| |
ACKNOWLEDGMENTS |
|---|
We thank David Byers, Neale Ridgway, Harold Cook, and Vanina Zaremberg for helpful comments during the course of these studies. This work was supported by Operating and Scholarship grants from the Canadian Institutes of Health Research (to C.R.M.), a Canadian Institutes of Health Research Doctoral Award (to A.L.H.), and a graduate studentship from Cancer Care Nova Scotia and the Canadian Cancer Society (to M.M.W.).
| |
FOOTNOTES |
|---|
* Corresponding author. E-mail address: cmcmaste{at}is.dal.ca.
DOI: 10.1091/mbc.01-11-0540.
| |
ABBREVIATIONS |
|---|
Abbreviations used: PtdCho, phosphatidylcholine; PtdEtn, phosphatidylethanolamine; CPT1, cholinephosphotransferase of S. cerevisiae; EPT1, choline/ethanolaminephosphotransferase of S. cerevisiae; CEPT1, human choline/ethanolaminephosphotransferase; CPT1, human cholinephosphotransferase; CT, CTP:phosphocholine cytidylyltransferase.
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