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Vol. 14, Issue 7, 2908-2920, July 2003
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* The Henry Wellcome Laboratory of Cell Biology, Division of Biochemistry and
Molecular Biology, Faculty of Biomedical and Life Sciences, University of
Glasgow, Glasgow G12 8QQ. Scotland;
Sinsheimer Laboratories, Department of Molecular, Cellular, and Developmental
Biology, University of California, Santa Cruz, Santa Cruz, California
95064; and
Department of Cellular and Structural Biology School of Medicine, University
of Colorado Health Sciences Center, Denver, Colorado 80262
Submitted March 19, 2003;
Accepted March 23, 2003
Monitoring Editor: Jennifer Lippincott-Schwartz
| ABSTRACT |
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| INTRODUCTION |
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Arf1 is the best-studied of the Arf family. It is required for the
recruitment and assembly of numerous coat protein complexes needed for vesicle
formation. These include COPI/coatomer, and the clathrin adaptors AP-1, AP-3,
AP-4, and GGAs, all of which function in the Golgi and trans-Golgi
network (TGN) systems (Boman and Kahn,
1995
; Boman et al.,
2000
; Donaldson and Jackson,
2000
; Boehm and Bonifacino,
2001
). Arf6, the sole class III member, is the most divergent Arf
family member in mammalian cells and it functions in the plasma
membrane/endocytic compartments where it seems to regulate endosomal recycling
and actin dynamics (D'Souza-Schorey et al.,
1995
,
1998
;
Song et al., 1998
).
In contrast, virtually nothing is known about the function of the class II
Arfs, Arf4 and Arf5.
The endocytic pathway is a complex, highly dynamic system that serves many
functions, including the internalization of extracellular components and their
subsequent sorting to different intracellular destinations
(Mukherjee and Maxfield, 2000
;
Gruenberg, 2001
). Rab GTPases
regulate discrete membrane-trafficking events throughout the entire
secretory/endocytic systems. It has been suggested that each Rab assembles a
multitude of effectors into a "Rab domain," thus coordinating
numerous events (Sonnishsen et
al., 2000
; Zerial and
McBride, 2001
). For example Rab5-GTP binding partners include
Rabaptin-5, EEA1, and PI3 kinase, proteins involved in early-endosome fusion
(Woodman, 2000
;
Zerial and McBride, 2001
). In
addition, Rab5-GTP also interacts with a motor protein to stimulate endosome
motility and may regulate soluble N-ethylmaleimide sensitive factor
attachment protein receptor-mediated fusion
(Zerial and McBride, 2001
).
Other Rabs are likely to have similarly pleiotropic roles.
Rab11 is implicated in regulating traffic through the endosomal recycling
compartment (ERC). Transferrin receptors (TfRs) are internalized via
clathrin-coated vesicles before entering early endosomes from where the
majority rapidly recycle back to the cell surface after releasing their cargo
(Hopkins, 1983
). However, some
TfRs traffic further into the cell to the perinuclear recycling endosomes
adjacent to the centrosomal area before returning to the plasma membrane (the
"slow" recycling route)
(Ullrich et al.,
1996
; Ren et al.,
1998
; Wilcke et al.,
2000
). Distinct domains along this pathway can be distinguished
based on the presence or absence of the small GTPases Rab4, Rab5, and Rab11
(Sonnishsen et al.,
2000
). The latter is found predominantly in the ERC and regulates
the exit of traffic from this compartment
(Ullrich et al.,
1996
; Ren et al.,
1998
; Wilcke et al.,
2000
). Although recent work has uncovered molecules such as RME-1
and myosin Vb (Grant et al.,
2001
; Lapierre et
al., 2001
) as potential regulators of the ERC, exactly how
its structure, function, and integrity are maintained is still poorly
understood.
The search for Arf effectors has yielded several candidate proteins,
including the Golgi-localized, gamma adaptin ear homology domain containing
Arf binding proteins (GGAs) (Boman et
al., 2000
; Dell'Angelica
et al., 2000
; Hirst
et al., 2000
), the arfaptins
(Shin and Exton, 2001
), and
arfophilin. With the exception of the GGAs, the function of these putative Arf
effectors is unknown. Arfophilin interacts specifically with GTP-bound class
II Arfs via its C-terminal domain (Shin
et al., 1999
). This finding was particularly interesting
given class II Arfs were assumed to play only supplementary roles to the more
abundant class I Arfs. Arfophilin can also interact with Arf6
(Shin et al., 2001
).
Very recently, arfophilin has been rediscovered in a search for Rab 11
effectors; two laboratories have reported that arfophilin binds Rab 11 GTP and
termed this protein Eferin and Rab 11-FIP3
(Hales et al., 2001
;
Prekeris et al.,
2001
). Despite this interest, neither the subcellular distribution
nor the function of arfophilin/eferin/Rab11-FIP3 is known.
Herein, we describe the identification and characterization of a homolog of arfophilin that we term arfophilin-2 that unlike arfophilin interacts strongly with GTP-bound Arf5 and not with GDP-bound Arf5 or other Arf family members.
Like arfophilin, arfophilin-2 also binds Rab11. We find that endogenous
arfophilin-2 localizes to the TGN/perinuclear region of HeLa cells with minor
staining at both the centrosomal area and focal adhesions. Expression of
GFP-arfophilin-2 chimera's results in a dramatic and specific accumulation of
TfR and Rab11 in a pericentrosomal compartment, but does not affect TfR
recycling. We further show that the arfophilins are homologous to
Drosophila nuclear fallout (Nuf), a protein which functions at the
centrosome where it plays a key role in cellularization and cytokinesis
(Rothwell et al.,
1998
). We show that arfophilin-2 and Nuf are functionally related
based on overexpression studies in mammalian cells. These data suggest that
the arfophilin family may represent a point of convergence of both Rab and Arf
signals in membrane traffic.
| MATERIALS AND METHODS |
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Molecular Biology
5' Rapid amplification of cDNA ends polymerase chain reaction was
performed using Expand High-Fidelity polymerase (Roche Diagnostics,
Indianapolis, IN), Marathon-Ready human testis cDNAs (BD Biosciences Clontech)
and nested gene specific primers (5'-CCTCGACCCTTTCATGGCGAACACCC-3'
and 5'-CCTTGAAGTTGATTCTCCCAGGTCGTTGG-3') designed against extended
sequence tag accession number AI570483
[GenBank]
, yielding two distinct but specific
arfophilin-2 5' ends. Full-length open reading frame of arfophilin-2 was
gel purified and TA-cloned. Green fluorescent protein (GFP)-tagged
arfophilin-2 was constructed by subcloning into pEGFP-C2 (BD Biosciences
Clontech). GFP-arfophilin-2
N was produced by ligating a BglII
fragment directly into the BamH1 site of pEGFP-C2. Dr. Ohara (Riren,
Yokohama, Japan) supplied KIAA0665 clone (arfophilin-1). Arf cDNAs were either
provided by K. Nakayama (University of Tsukuba, Tsukuba, Japan), J.M. Tavare,
or J. Donaldson (National Institutes of Health, Bethesda, MD), or amplified
from mouse cDNA. A recombinant adenovirus designed to overexpress myc-tagged
Rab11-S25N was constructed using Adeno-X expression system (BD Biosciences
Clontech) as described in the manufacturer's protocols.
Northern Blotting
Random primed [32P]CTP-labeled cDNA probes corresponding to the
3' 1 kb of arfophilin-1 and -2 open reading frames were used to probe
human MTN I and II Northern blots (BD Biosciences Clontech). Blots were probed
for arfophilin-2 first, stripped, and then probed for arfophilin-1.
Antibodies
Antibodies specific for arfophilin-1 and -2 were raised using bacterially
expressed recombinant protein. For arfophilin-2, a 1.2-kb BglII
fragment originating from the prey vector was subcloned into pQE32 (QIAGEN,
Valencia, CA). This fragment encodes the C-terminal 330 amino acids of
arfophilin-2 in frame with an N-terminal hexahistidine tag. In the case of
arfophilin-1, a 900-base pair BglII fragment (also from the prey
vector) encoding the C-terminal 200 amino acids was subcloned into pQE31.
Antibodies to arfophilin-1 and arfophilin-2 were raised in rabbits and sheep,
respectively, by Diagnostics Scotland (Law Hospital, Carluke, Scotland) and
affinity purified using recombinant antigen immobilized on CH-Sepharose
4B.
Other Antibodies
Anti-GRASP55 or GRASP65 were those described in Barr et al.,
(1997
). Antibodies against AP-1
(
-adaptin), Arf5, and mRME-1 were from M.S. Robinson (University of
Cambridge, Cambridge, United Kingdom), anti-CI-MPR was from G.E. Lienhard
(Dartmouth Medical School, Hannover, NH), and CD-MPR from A. Hille-Rehfeld
(Universitat Göttingen, Göttingen, Germany). Antibodies against
Rab4, Rab5, and Rab11 were from Santa Cruz Biotechnology (Santa Cruz, CA).
Anti-TfR was from Zymed (Cambridge, United Kingdom) and anti-
- and
-tubulin and anti-
COP from Sigma Chemical (Poole, Dorset, United
Kingdom).
Cell Culture and Transfection
HeLa cells were grown in minimal essential media containing with 10% fetal
bovine serum and nonessential amino acids. Cells were transfected using
LipofectAMINE reagent (Invitrogen, Paisley, Scotland) according to
manufacturer's instructions and used 18 h later. Chinese hamster ovary (CHO)
cells were grown in Ham's F-12 media containing fetal bovine serum and
transfected using LipofectAMINE at
60% confluence. When cells were
infected with adenovirus, the virus was diluted in low-serum-containing media
and incubated on the cells for 3 h. Thereafter, an equal volume of normal
media was added and the incubation continued for 24 h. After this time, cells
were fixed for immunofluorescence as outlined below.
Pull-Down Assays
Dishes (100 mm) of CHO cells expressing GFP-tagged arfophilin-1 or
arfophilin-2 were washed with ice-cold phosphate-buffered saline (PBS) and
scraped in 250 µl of ARF binding buffer (50 mM HEPES, 100 mM KCl, 5 mM
NaCl, 1 mM MgCl2, 0.5 mM EGTA, 1 mM EDTA, 1 mM dithiothreitol, pH
7.2). Lysates were prepared by passing suspension through a 27-gauge needle
before centrifugation at 21,000 x g for 20 min at 4°C.
Arf4Q71L, Arf5-Q71L, Arf6-Q71L, and wild-type Arf5 were subcloned into pGEX5X1
and expressed by 3-h isopropyl
-D-thiogalactoside induction
in E. coli strain Bl21 DE3 (pLysS). Cells were lysed in 10 ml of 50
mM Tris pH 7.5, 1 mM EDTA, 100 mM NaCl, 5% glycerol, 0.1% Triton X-100, 1 mM
dithiothreitol with protease inhibitors per 100-ml culture, and sonicated for
3 x 30 s. GST-ARF proteins were affinity purified using
glutathione-Sepharose 4B, eluted with 10 mM reduced glutathione, and dialyzed
against PBS.
GST-Arf protein (2040 µg) was mixed with 25 µl of glutathione-Sepharose 4B for 30 min. CHO cell lysate (500 µl) was then added and rotated at 4°C for 1 h. The Sepharose was washed and bound proteins eluted by boiling in 30 µl of SDS-PAGE loading buffer. The same protocol was used for GST-Rab11 pull-downs.
Immunocytochemistry and Immunofluorescence Microscopy
Cells on coverslips were fixed either in methanol at -20°C for 4 min or
fixed in 3.7% p-formaldehyde in PBS for 10 min followed by
permeabilization in 0.1% Triton X-100 in PBS for 1 min. The cells were washed,
blocked and incubated with antibodies as described previously
(Millar et al.,
1999
). Confocal microscopy was performed on either a Zeiss 410 or
Zeiss Pascal confocal system using a microscope fitted with 63x
1.4-numerical aperture plan apochromat objectives. Cells labeled with red
fluorophores were excited at 543 nm, and a 590-nm long-pass filter was used
for collecting emissions. Green fluorophores were excited at 488 nm with a
505- to 520-nm band-pass detection filter. The fraction of cross-over was
determined to be <3%. Images were analyzed using MetaMorph software
(Universal Imaging, Downington, PA).
Transferrin Pulse-Chase Experiments
HeLa cells on coverslips were incubated in serum-free media containing 0.6%
(wt/vol) bovine serum albumin for 2 h, with 2.5 µg/ml Texas Red transferrin
(Molecular Probes, Leiden, Holland) added for the final 1060 min. This
was chased by incubation with 100 µg/ml iron-loaded human transferrin.
Cells were washed in ice-cold buffer, fixed, and analyzed. Cell surface
transferrin receptor levels were quantified exactly as outlined in Millar
et al. (1999
. For
assay of the rate of transferrin (Tf) release, cells were incubated for 2 h in
3 nM 125I-Tf, washed in ice-cold citrate buffer to remove cell
surface-bound Tf, and then warmed to 37°C and the rate of Tf
externalization assayed as outlined in Millar et al.
(1999
).
| RESULTS |
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Analysis of the predicted sequence revealed that arfophilin-2 is
hydrophilic with no potential signal sequences or transmembrane domains and a
molecular mass of
61 kDa. Arfophilin-1 and -2 shared significant homology
with the Caenorhabditis elegans protein F55C12.1a/F55C12.1b and
Drosophila melanogaster nuclear fallout
(Figure 1A)
(Rothwell et al.,
1998
). The major similarities between the arfophilins and Nuf lie
in the C-terminal
300 amino acids in regions predicted to form
coiled-coils, whereas the N termini are more divergent
(Figure 1A). The homologous
regions of all the proteins belong to a domain of
70 amino acids present
in the ProDom database (designated PD031147). Arfophilins-1 and -2 also have
leucine zipper motifs in their C termini
(Figure 1A). Neither of the
arfophilins possess the sec7 domains characteristic of Arf guanine nucleotide
exchange factors, nor do they have the characteristics of Arf GTPase
activating proteins, suggesting that they are unlikely to be direct regulators
of the Arf GTPase cycle.
Interestingly, arfophilin-1 is identical to the recently described Rab 11
binding protein eferin/Rab 11-FIP3 (Hales
et al., 2001
;
Prekeris et al.,
2001
). Analysis of the predicted amino acid sequence of several
recently identified Rab 11 binding proteins has identified a 20-amino acid
domain involved in Rab 11 binding that is present at the extreme C termini of
arfophilin-1 (sequence in italics in Figure
1A) (Prekeris et al.,
2001
). Arfophilin-2 is strikingly similar to arfophilin-1 over
this region, suggesting that this protein is also likely to interact with Rab
11 (see below). However, the N-terminal half of arfophilin-1 and -2 are quite
distinct. This suggests that although both of these proteins may be predicted
to interact with the same sets of small GTPases, they may subserve distinct
functions and/or be differentially regulated.
To confirm that arfophilin-2 was a bona fide Arf and Rab binding protein,
we examined the ability of GST-Arf proteins to bind both arfophilin-1 and
arfophilin-2. GST-Arf5-Q71L effectively pulled down both overexpressed
arfophilin-1 and arfophilin-2 from CHO cell lysates. In contrast, neither
GST-Arf6-Q71L, GST-Arf1Q67L, nor GST-Arf4-Q71L seemed to interact with
arfophilin-2 (Figure 1B). These
data are subtly different to that reported for arfophilin-1, which was shown
to interact weakly with Arf6-Q71L (Figure
1B). Neither of the arfophilins interact with Arf1 (our
unpublished data). To further confirm the nucleotide specificity of the
Arf5-arfophilin-2 interaction, we performed a series of pull-down experiments
by using wild-type Arf5 expressed as a GST fusion, including either
GTP
S or GDP
S in the buffer
(Figure 1B). The data clearly
demonstrate that the interaction of Arf5 with arfophilin-2 is dependent upon
the nucleotide status of the Arf. These data was further confirmed using
two-hybrid assays (our unpublished data). Hence, arfophilin-1 and -2 exhibit
some subtle differences in their ability to bind activated Arf proteins. Using
the same approach, we showed that GST-Rab11-Q71L was able to effectively
pull-down both arfophilin-1 or -2 expressed in CHO cells
(Figure 1C). Hence, both of
these proteins are capable of binding directly to two distinct classes of
small molecular weight GTPases.
Tissue Expression of Arfophilin-2: A Protein Abundant in Testes
Northern blot analysis of a panel of 16 human tissues was performed to
study the pattern of expression of arfophilin-2. The highest levels of
expression were observed in testis (Figure
2A). Prolonged exposure of the blot revealed a 4.4-kb transcript
present in all tissues examined (our unpublished data). After stripping, an
analogous arfophilin-1 probe was also used on the same blots and this showed
no crosshybridization with the major arfophilin-2 transcripts. Arfophilin-1 is
also highly expressed in testes with major 5.2-kb and minor 4.2-kb
transcripts. Arfophilin-1 expression was also noted in ovary, skeletal muscle,
and kidney. Skeletal muscle and heart also express large (
7-kb)
arfophilin-1 mRNAs.
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We raised polyclonal antibodies to recombinant proteins comprising either
the C-terminal 330 amino acids of arfophilin-2 or the C-terminal 200 amino
acids of arfophilin-1. In both cases, the antigen was recognized specifically
by the immune but not the preimmune serum, and the signals were blocked by
prior incubation of the serum with the appropriate recombinant protein (our
unpublished data). Control immunoblots in which the antiserum were used to
probe either purified recombinant arfophilin-1 or -2, or the protein
overexpressed in cells revealed that these antibodies specifically recognized
the protein of interest and did not exhibit cross-reactivity
(Figure 2B, top). Immunoblot
analysis identified a major band of
85 kDa in human testis, HeLa, and
human embryonic kidney 293 cells. Rat testis and a CHO cell lysate, however,
did not exhibit any immunoreactivity, presumably due to a lack of species
cross-reactivity (Figure 2B, bottom). When overexpressed in CHO cells, arfophilin-2 exhibited identical
electrophoretic mobility compared with the endogenous protein in testis and
HeLa cells (Figure 2B).
Localization of Arfophilin-2
We next used confocal microscopy to determine the subcellular localization
of endogenous arfophilin-2 in HeLa cells. Staining was observed primarily in a
perinuclear region that partially overlapped with staining for the
cation-independent mannose-6-phosphate receptor (CI-MPR), which traffics
between the TGN, lysosomes, and plasma membrane
(Kornfeld, 1992
)
(Figure 3A). Arfophilin-2
staining was also partially coincident with
COP
(Figure 3A) and with TfRs in
the perinuclear region. In contrast, overlap with early endosome markers such
as EEA1 or RME1 was limited (Figure
3A). In addition to this major pool, arfophilin-2 immunoreactivity
was also detected at the centrosomal area, where it was coincident with,
although slightly offset from,
-tubulin staining
(Figure 3B). Finally, we also
observed arfophilin-2 staining at the periphery of cells, in structures that
resembled focal adhesions. Indeed, this staining was found to overlap with
staining for paxillin, a protein known to localize at focal adhesions
(Figure 3B) (Norman et al.,
1998
). Arfophilin-2 staining at all of these sites was abolished
by prior incubation with recombinant arfophilin-2 but not arfophilin-1 and no
staining was observed using preimmune serum (our unpublished data). We
therefore conclude that there are at least three pools of arfophilin-2 in HeLa
cells, a major one around the TGN and minor pools around the centrosome and at
focal adhesions.
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The effects of the drugs nocodazole and brefeldin A (BFA) on arfophilin-2 distribution were examined by immunofluorescence microscopy (Figure 4). The former is a microtubule-disrupting agent, whereas the latter disrupts the Golgi by inhibiting Arf activation. In control cells arfophilin-2 partially colocalizes with the CI-MPR and TfR in the TGN region. On BFA treatment (20 µg/ml for 10 min) arfophilin-2 staining became very diffuse and cytosolic, with little colocalization with either TfR (our unpublished data) or CI-MPR (Figure 4). Nocodazole treatment (50 ng/ml for 1 h) also disrupted the localization of both proteins, although arfophilin-2 remained in punctate structures. Under these conditions, the extent of overlap of arfophilin-2 and CI-MPR was greatly reduced, whereas a significant degree of colocalization of arfophilin-2 and TfR was evident in nocodazole-treated cells. Conversely, in our hands neither BFA nor nocodazole treatment seemed to have any effect on the distribution of arfophilin-2 at focal adhesion, suggesting that the localization/maintenance at these sites does not require functional microtubules (our unpublished data).
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Finally, we set out to determine whether the overexpression of mutants of either Rab11 or Arf5 could modulate the distribution of endogenous arfophilin-2. The results (Figure 5) show that overexpression of Arf5-T31N displaced endogenous arfophilin-2 from the perinuclear localization. Such data offer the hypothesis that the localization of arfophilin-2 to the perinuclear region of the cells is mediated by an interaction with Arf5-GTP. This contention is further supported by our data showing that BFA-treatment displaced arfophilin-2 from the TGN area (Figure 4). In contrast, the GTP-locked mutant of Arf5 had little discernible effect on arfophilin-2 distribution (Figure 5), neither did the GDP or GTP mutants of Arf6 (our unpublished data). To determine the effect of Rab11 mutants, we infected cells with a recombinant adenovirus engineered to overexpress myc-tagged Rab11-S25N. Despite high level overexpression, we observed no effect on the distribution of arfophilin-2 at either the TGN or focal adhesions (our unpublished data).
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GFP-Arfophilin-2 Overexpression Alters Recycling Endosome
Morphology
To examine the cellular function of arfophilin-2, we generated full-length
and N-terminally truncated arfophilin-2 constructs fused to the C termini of
GFP. In contrast to the endogenous proteins, these chimeric proteins were
localized tightly around
-tubulin staining at the centrosome
(Figure 6), with little or no
staining observed in the Golgi region (compare
Figure 6b with
Figure 3b). More strikingly,
transfected cells displayed a dramatic accumulation of TfR and the recycling
endosomal marker Rab 11 in the same pericentriolar region, an effect absent in
adjacent nontransfected cells (Figure
6). The data shown is for GFP-tagged full-length arfophilin-2, but
similar results were obtained using GFP-fused to the C-terminal 330 amino
acids of arfophilin-2 (our unpublished data). This altered morphology of the
endosomal system seemed to be confined to the perinuclear recycling endosomes.
Expression of GFP-arfophilin-2 had no discernible effect on the distribution
of early endosome markers such as EEA1
(Figure 6), or on the
distribution of another endosomal associated protein, RME1
(Figure 6). Similarly, the
localization of a range of other proteins such as MPR, AP-1, and AP-3, and
GRASP65 and 55 were all unaffected (Figure
6; our unpublished data). This suggests that arfophilin-2 is
controlling either some aspect of the flux of TfR traffic through the
Rab11-positive perinuclear recycling endosomal system or the three-dimensional
distribution of the recycling compartment. Note that the low levels of
expression of endogenous Arf5 have precluded analysis of the distribution of
Arf5 in cells expressing GFP-arfophilin-2.
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Given the homology between arfophilin-1 and arfophilin-2 (Figure 1A), we also expressed the C-terminal 330 amino acids of arfophilin-1 in HeLa cells as a GFP fusion protein (Figure 7). GFP-arfophilin-1 was predominantly localized to a perinuclear compartment. In cells expressing GFP-arfophilin-1, we again observed accumulation of both TfR and Rab 11 into this compartment, consistent with the previously reported ability of arfophilin/eferin/Rab11-FIP3 to bind Rab 11. In contrast, the distribution of EEA1 was unaffected by GFP-arfophilin-1 overexpression.
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We sought to determine whether the profound effects on TfR distribution resulting from GFP-arfophilin expression were due to changes in the rate of TfR entry/exit from the ERC or whether the effects were a consequence of altered morphology of the compartment. To this end, we determined whether the GFP-arfophilin-2-/TfR-positive compartment was accessible to fluorescent Tf added to the culture medium, and if so, whether this could be chased out of the compartment with unlabeled Tf. Within 20 min of uptake at 37°C, significant colocalization between the GFP-arfophilin-2 and Texas-Red Tf was observed, demonstrating that TfR from the cell surface are able to traffic into the GFP-arfophilin-2 compartment (our unpublished data). After a 60-min uptake and subsequent chase with nonlabeled Tf, a steady decrease in Tf fluorescence was observed overtime in both transfected and nontransfected cells. By 90 min, nearly all the labeled Tf had disappeared, suggesting that exit from the compartment is not compromised. These experiments suggest that there is not a quantitative block in TfR trafficking to the GFP-arfophilin-2 compartment. Similar data were observed in cells overexpressing GFP-arfophilin-1. Such data are difficult to quantify, and thus in an attempt to examine transferrin trafficking in more detail, we examined the rate or Tf externalization and levels of cell surface TfR in HeLa cells transiently expressing GFP-arfophilin-2. Neither levels of TfR at the cell surface (our unpublished data) nor the rate of Tf externalization (Figure 8) were affected by overexpression of GFP-arfophilin-2. We next examined the effect of nocodazole and BFA on the pericentrosomal localization of GFP-arfophilin-2. Figure 9 shows that treatment with nocodazole induced a fragmentation of the GFP-arfophilin-2 compartment, which became punctate and dispersed throughout the cell. Interestingly, when the GFP-arfophilin-2 compartment was dispersed with nocodazole, TfR remained tightly associated with the GFP-arfophilin-2 compartment (Figure 9). In contrast, BFA had minimal effect on the localization of GFP-arfophilin-2 localization (our unpublished data; see DISCUSSION).
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Arfophilins Are Mammalian Homologs of Drosophila Nuclear
Fallout
Analysis of the databases for proteins with homology to arfophilins-1 or -2
identified the Drosophila protein Nuf
(Figure 1)
(Rothwell et al.,
1998
). We therefore expressed GFP-Nuf in mammalian cells and
examined its localization and effects on TfR distribution. Like
GFP-arfophilin-2, GFP-Nuf localized to a region immediately adjacent to the
-tubulinpositive centrosome
(Figure 10). Moreover, the
effect of expression of GFP-Nuf on TfR and Rab11 distribution is strikingly
similar to that seen for arfophilins in that both molecules become tightly
localized to the Nuf-positive region. In addition, endogenous arfophilin-2
became clustered in the same GFP-Nufpositive region
(Figure 10). Similar data were
obtained using a construct encoding GFP fused to the C-terminal
(arfophilin-homologous) 300 amino acids of Nuf (our unpublished data). The
experiment shown in Figure 8
was repeated in cells expressing GFP-Nuf. The data (our unpublished data)
revealed that Tf added to the media of cells expressing GFP-Nuf rapidly
entered the pericentrosomal compartment and could be chased out with unlabeled
Tf with kinetics similar to that shown for GFP-arfophilin-2. These data argue
strongly that the arfophilins, by virtue of their conserved C termini, are
mammalian homologs of Nuf. These data are further supported by data showing
that Nuf directly binds mammalian Rab11 in a nucleotide-dependent manner
(Matheson and Gould, unpublished data).
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| DISCUSSION |
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Tissue Distribution of Arfophilin-2
The arfophilin-2 gene is moderately large (
200 kb), and there are
homologs in Musca musculus, Rattus norvegicus, Xenopus laevis,
Orizayas latipes, C. elegans, and D. melanogaster but not in the
Saccharomyces cerevisiae genome. Northern blotting revealed a 4.4-kb
arfophilin-2 transcript in all tissues, albeit at low levels
(Figure 2A). Both arfophilins
are highly expressed in testes, the significance of this is not presently
known but may reflect the high degree of mitotic and meiotic cell division
occurring in testes compared with the other tissues examined. The notion of a
role in cell division is attractive given the homology with Nuf (see
below).
Subcellular Distribution and Function of Arfophilin-2
Immunofluorescence microscopy identified a major BFA-sensitive pool of
arfophilin-2 localized to the TGN region of the cell, consistent with a role
for arfophilin-2 in Arf5-mediated events. Minor but specific staining was also
observed at the centrosomal area and in focal adhesions. This latter
observation is interesting given that membrane traffic to sites of plasma
membrane protrusion seems to involve traffic from Rab11-positive recycling
endosomes and may involve Arfs. The staining at each of these sites was
specific, because it was selectively blocked by prior incubation of the
antibody with recombinant arfophilin-2 but not arfophilin-1, and was not
observed using preimmune serum (our unpublished data).
We have further shown that overexpression of tagged and/or N-terminally
truncated members of the arfophilin family in HeLa cells causes a dramatic and
specific effect on the distribution of TfRs, implicating arfophilin-2 in the
regulation of the endosomal system. Such dramatic effects on the endosomal
compartment have been observed when other Rab-11 binding proteins are
overexpressed (Hales et al.,
2001
). Furthermore, the fact that Rab 11, but not EEA1 was
similarly affected strongly argues that arfophilin-2 specifically affects the
ERC and is consistent with arfophilin-2 interacting with Rab11
(Ullrich et al.,
1996
; Ren et al.,
1998
). Several lines of evidence argue that perturbations of
endosomal morphology and the centrosomal accumulation of GFP-arfophilin-2 are
not artifacts of either GFP-tagging or overexpression. First, overexpression
of hemaggultinin (HA)-tagged truncated arfophilin-2 mutants also accumulate at
the centrosomal area of cells (our unpublished data). In contrast, expression
of full-length, untagged arfophilin-2 results in markedly enhanced staining in
all three subcellular locations described for the endogenous protein in
Figure 3 (our unpublished
data). This suggests that the overexpressed full-length protein seems to
localize in an identical manner to the endogenous protein, but the truncated
protein is localized to the centrosomal area only. (The inability of our
antibodies to distinguish between endogenous and overexpressed proteins
precludes a detailed analysis of this.) Second, the localization of a fraction
of the endogenous protein to the centrosomal region implies that at some stage
during its functional cycle, endogenous arfophilin-2 is located at this
region. Finally, overexpression of GFP-Nuf has an almost identical phenotype
and also recruits a significant fraction of the endogenous protein to the
centrosomal area. Our interpretation of this data is that the presence of the
bulky GFP at the N terminus, or the deletion of the N terminus, result in
perturbation of some aspect of either the localization or the function of
arfophilin-2. Although this pericentrosomal location of GFP-arfophilin-2 could
represent aggresome formation, we suggest for the reasons indicated above that
this is unlikely.
The fact that transferrin can still enter and leave the
GFP-arfophilin-2positive compartment
(Figure 8) argues that the
changes in TfR distribution are not due to a quantitative trafficking block
(and also mitigates against aggresome formation). Such a recycling block was
recently described upon overexpression of GFP-myosin Vb tail, which caused
internalized transferrin to accumulate in a similar Rab 11-positive
compartment, which could not be chased out
(Lapierre et al.,
2001
). Although this is clearly not the case with GFP-arfophilin-2
overexpression, subtle changes in the kinetics of entry/exit from the
recycling endosomes may still be occurring that are below the limit of
resolution of the assays used herein, which used either optical assays or
Tf-trafficking assays in transfected cells
(Figure 8), both of which are
limited by sensitivity. Difficulties in obtaining stable cell lines
overexpressing these arfophilin-2 deletions or GFP-tagged species have
precluded a more detailed analysis of TfR-trafficking thus far. These caveats
notwithstanding, the significant change in distribution of TfR upon
GFP-arfophilin expression suggests that these molecules are exerting an effect
on TfR distribution and/or compartment morphology.
Exactly how arfophilin-2 could regulate the function and/or distribution of
the ERC is unclear. One potential explanation could be that arfophilin-2 is
involved in motor protein recruitment or the regulation of other microtubule
associated proteins. In this regard, Sullivan and colleagues have demonstrated
that Nuf interacts physically with the motor protein dynein (Riggs, Rothwell,
Mische, Debec, Hickson, Gould, Hays, and Sullivan (unpublished data) that may
be involved in the regulation of ERC morphology. The nocodazole sensitivity of
GFP-arfophilin-2 localization (Figure
9) clearly demonstrates the microtubule dependency of the
compartment that is characteristic of the ERC. The fact that it is reversible
implies that minus-enddirected motor protein activity is still
functional. It may be that plus-enddirected motor recruitment or
function is inhibited by GFP-arfophilin-2/Nuf overexpression. This sits well
with the model proposed for Nuf function (Rothwell et al.,
1998
,
1999
). Indeed, it is striking
that the localization of GFP-Nuf to the centrosome is dependent upon
functional microtubules.
The localization of GFP-arfophilin-2 around the centrosome is interesting.
Studies in other cells have shown that the ERC collapses into this region upon
BFA treatment (Reaves and Banting,
1992
). The significant overlap of GFP-arfophilin-2 with markers
for the ERC supports the notion that these arfophilin mutants become stably
associated with Rab11-positive ERC membranes and induce their redistribution
to the centrosomal area. Because endogenous arfophilin-2 is BFA sensitive
(Figure 4), it is conceivable
that endogenous arfophilin-2 traffics between a major BFA-sensitive pool in
the TGN area and a BFA-resistant recycling endosome pool and that it gets
trapped in the latter upon expression of the GFP-tagged full-length or
truncated form of arfophilin-2. Such a model could place two distinct GTPases
at each location, Rab11 in the ERC and Arf5 in the TGN, which function in a
concerted manner to regulate traffic between the two compartments. This
hypothesis is also supported by our data showing that the dominant negative
Arf5 mutant could effectively displace endogeous arofphilin-2 from the
perinuclear area, suggesting that the localization of the molecule in the
perinuclear area requires active Arf5
(Figure 5).
Arfophilins and Nuclear Fallout: Homologous Proteins with Similar
Functions?
We have also identified a conserved family of proteins in metazoans that
includes the arfophilins, hypothetical C. elegans protein
F55C12.1a/F55C12.1b and D. melanogaster Nuf. Nuclear fallout
is an essential maternal effect gene, whose product is required for
cellularization in Drosophila (Rothwell et al.,
1998
,
1999
). The subcellular
localization of Nuf changes during the cell cycle. During the late syncytial
divisions, it is cytoplasmic but concentrates at the centrosomes during
prophase. It is also found at the centrosomes throughout cellularization where
it is believed to load vesicles onto microtubules for transport to the
furrows. In nuf-mutant embryos, the recruitment of cortical actin is
disrupted (Rothwell et al.,
1999
; Zhang et al.,
2000
).
The observation that GFP-Nuf overexpression in HeLa cells results in
largely the same phenotype as that of GFP-arfophilin-2 overexpression suggests
that these proteins are functionally related. This has several important
implications. First, it suggests a potential role for the arfophilins in cell
division, particularly cytokinesis, because Nuf is required for the formation
of cellularization furrows in the Drosophila embryo. Because testis
is a tissue undergoing a high degree of cell division, such a role may help to
explain the high level of expression observed in this tissue. The findings
also implicate the ERC in cytokinesis. This is consistent with recent studies
in C. elegans where RNA interference-induced suppression of Rab 11
leads to specific regression of the cleavage furrow at the final stage of
abscission (Skop et al.,
2001
). The significance of the role of Rab 11 should not be
overlooked, particularly given the interaction of arfophilins with this
GTPase. Arfs have also been implicated in cellularization in
Drosophila and cytokinesis in C. elegans
(Sisson et al., 2000
;
Skop et al., 2001
).
Such observations suggest the hypothesis that arfophilin-2, and by extension
the ERC, may be involved in traffic to the midbody during cytokinesis.
Moreover, the identification of arfophilin-2 as a Rab 11 and Arf binding
protein offers the tantalizing suggestion that this protein may integrate the
Rab 11 and Arf signals to membrane traffic during cytokinesis. Such a
hypothesis is being actively pursued in the laboratory.
In summary, we describe the functional characterization of a novel member of the arfophilin family, termed arfophilin-2. The arfophilins share significant sequence homology with the Drosophila protein Nuclear Fallout, and our data suggests that Nuf and the arfophilin family are functionally related. Arfophilin-1 and 2 protein, together with Nuf, define a new group of molecules involved in membrane traffic that are capable of integrating signals from both class II Arfs and also from Rab11, an entirely distinct GTPase. The challenge ahead will be to define the relative importance of the GTPase inputs, and to define the precise functional role of these interesting dual GTPase effectors.
| ACKNOWLEDGMENTS |
|---|
|
|
|---|
| Footnotes |
|---|
Present address: Department of Biochemistry and Biophysics, 513 Parnassus
Ave., University of California, San Francisco, San Francisco, CA
94143-0448. ![]()
|| Present address: Max Planck Institute for Biochemistry, Department of Cell
Biology, Martinsreid, D-82152 Germany. ![]()
¶ Corresponding author. E-mail address: g.gould{at}bio.gla.ac.uk.
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