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Vol. 16, Issue 10, 4745-4754, October 2005
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* Biozentrum, University of Basel, CH-4056 Basel, Switzerland;
Department of Biology, Technion, Haifa 32000, Israel
Submitted June 27, 2005;
Accepted August 2, 2005
Monitoring Editor: Suzanne Pfeffer
| ABSTRACT |
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| INTRODUCTION |
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In all systems (apparently even for clathrin-dependent endocytosis; Paleotti et al., 2005
), coat recruitment is initiated by a small GTPase that is activated at the membrane by a guanine nucleotide exchange factor (GEF). The minimal requirements to form coats have been defined in vitro using chemically defined liposomes and purified coat components. The generation of COPI vesicles required the heteroheptameric coatomer complex and ADP-ribosylation factor 1 (Arf1) and was enhanced by acidic phospholipids or by lipid-anchored sorting signals (Spang et al., 1998
; Bremser et al., 1999
). COPII consists of two dimers that can be sequentially assembled on liposomes containing phosphoinositides. Sec23/24 is first targeted by Sar1·GTP to the membrane as a primer to recruit the second layer of Sec13/31 (Matsuoka et al., 1998a
, 1998b
). Clathrin coats are similarly composed of two layers (Robinson and Bonifacino, 2001
). Typically, heterotetrameric adaptor proteins (APs) connect cargo molecules in the membrane with the outer layer of clathrin triskelia. AP-3, Arf1·GTP, and clathrin were sufficient to produce coats and clathrin-coated vesicles (CCVs; Drake et al., 2000
). In contrast, AP-1 recruitment to liposomes and CCV formation required cytosolic factor(s) in addition to Arf1·GTP (Zhu et al., 1999
). Alternatively, AP-1 recruitment could be reconstituted in the absence of cytosol on liposomes presenting covalently linked sorting signals (Crottet et al., 2002
).
GTP hydrolysis causes uncoating of COPI and COPII coats (Tanigawa et al., 1993
; Antonny et al., 2001
). Sar1 and Arf1 have low intrinsic GTPase activity, and specific GTPase-activating proteins (GAPs) act in a regulated manner to obtain an appropriately timed deactivation of these G proteins (Randazzo and Hirsch, 2004
). The GAP for Sar1 is Sec23, i.e., a subunit of the first COPII layer. Recruitment of the second subcomplex, Sec13/31, further stimulates GAP activity, thus accelerating disassembly of the completed coat (Antonny et al., 2001
).
Arf GAPs are a family of proteins containing a conserved catalytic domain, whereas other parts of the proteins are highly variable (Randazzo and Hirsch, 2004
). Two types of Arf1 GAPs, ArfGAP1, and ArfGAP2/3 (Gcs1 and Glo3 in Saccharomyces cerevisiae) were implicated in Golgi trafficking (Poon et al., 1999
; Yang et al., 2002
; Lewis et al., 2004
; Watson et al., 2004
). GTP hydrolysis in COPI coats is activated by ArfGAP1 (Cukierman et al., 1995
) and was shown to contribute to cargo sorting, in addition to uncoating (Nickel et al., 1998
; Lanoix et al., 1999
; Malsam et al., 1999
; Pepperkok et al., 2000
). Coatomer was found to stimulate ArfGAP1-mediated GTP hydrolysis on Arf1 (Goldberg, 1999
). This stimulation was inhibited by peptides derived from specific COPI cargo (hp24a/p24
1), suggesting a mechanism for increasing the probability for cargo to be incorporated into the growing coat polymer (Goldberg, 2000
; Lanoix et al., 2001
; Weiss and Nilsson, 2003
).
Little is known about the role of GTP hydrolysis in clathrin coats with AP-1 or AP-3. In purified CCVs, almost no Arf1 could be detected, suggesting that GTP hydrolysis is not per se sufficient to induce disassembly of the complete coat (Zhu et al., 1998
). Here we have studied the role of sorting signals and GTP hydrolysis in the recruitment of AP-1 adaptors to liposomes. Our findings show that cargo signals cause AP-1 to form high-molecular-weight complexes even in the absence of clathrin. These complexes are susceptible to GTP hydrolysis induced by ArfGAP1. AP-1 regulates the activity of ArfGAP1, indicating that controlled GTP hydrolysis may play a role in cargo selection and productive coat formation.
| MATERIALS AND METHODS |
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To produce AP-1 complexes lacking the appendage domains of
- and
1-adaptins, AP-1 was purified by separating coat proteins released from CCVs by hydroxyapatite chromatography (Ahle and Ungewickell, 1986
) followed by dialysis of AP-1-containing fractions into MonoQ buffer, and ion exchange chromatography on a MonoQ HR10/10 column eluted by a 10-ml gradient of 0150 mM NaCl and a 100-ml gradient of 150450 mM NaCl in MonoQ buffer. Purified AP-1 at 10 µg/ml in MonoQ buffer was digested with TPCK-treated trypsin (Sigma, Buchs, Switzerland) at an enzyme/substrate weight ratio of 1:1 for 30 min at room temperature to remove the
1 and most
appendages, but leaving µ1 intact (Schröder and Ungewickell, 1991
). Stronger trypsin treatment led to partial digestion of µ1, resulting in reduced liposome recruitment (unpublished data). Reactions were stopped on ice with a fivefold excess of ovomucoid (trypsin inhibitor; Sigma). The extent of digestion was monitored by immunoblot analysis using mouse anti-
-adaptin (100/3 from E. Ungewickell, Hannover, Germany) directed against the hinge sequence to detect the undigested
subunit, mouse anti-
1/2-adaptin (100/1; Sigma) recognizing an epitope in the
core, and a rabbit anti-µ1A antiserum raised against the synthetic peptide EAEDKEGKPPISV.
Liposome Recruitment Assay
Peptidoliposomes made of 97.5% soybean phospholipids (a mixture of phospholipids also containing phosphoinositides, sold as azolectin by Sigma; Zhu et al., 1999
) and 2.5% N-((4-maleimidylmethyl)cyclohexane-1-carbonyl)-1,2-dipalmitoyl- or -dioleoyl-sn-glycero-3-phosphoethanolamine (MMCC-DPPE [Molecular Probes, Eugene, OR] and MMCC-DOPE [Avanti Polar Lipids, Alabaster, AL]) were obtained after extrusion through 400-nm pore size polycarbonate filters and incubation with synthetic peptides CRKRSHAGYQTI (LY) or CRKRSHAGAQTI (LA; Crottet et al., 2002
). Recruitment assays were performed essentially as described (Crottet et al., 2002
). In brief, 100 µl of peptidoliposomes (0.5 µmol lipid) were incubated for 30 min at 37°C with 5 µg of Arf1, 0.2 mM GMP-PNP or 2 mM GTP, and 10 µg of mixed adaptors or 0.5 µg of pure AP-1. Samples were loaded at the bottom of a sucrose step gradient and centrifuged at 300,000 x gav for 1 h at 4°C to float the liposomes. To test the effect of GTP hydrolysis, half the top fraction (500 µl) was incubated with 10 µg ArfGAP1 at 37°C for 30 min before a second floatation. Fractions were analyzed by trichloroacetic acid precipitation, SDS-PAGE, and immunoblotting using antibodies against
-adaptin (100/3) or Arf1 (1D9 from Alexis, Lausen, Switzerland), a peroxidase-coupled secondary antibody (Sigma), and enhanced chemiluminescence.
Calf brain cytosol was prepared as before (Crottet et al., 2002
) and centrifuged for 30 min at 170,000 x g immediately before use. Liposomes (0.5 µmol lipid) with or without coupled peptides were incubated for 30 min at 37°C with 1 mg of cytosol, 5 µg of Arf1 (or Arf1Q71L, a gift by K. Fiedler), and 0.2 mM GMP-PNP or 2 mM GTP in a total volume of 175 µl and analyzed as above.
Velocity Sedimentation
Floated liposomes (340 µl) were mixed with 340 µl assay buffer, supplemented with Triton X-100 or octylglucoside (Sigma) to 0.5%, loaded onto 4.3 ml of a 1025% sucrose gradient in assay buffer with 0.2% Triton or octylglucoside, and centrifuged at 100,000 x gav for 5 h at 4°C. Where indicated, solubilization was performed at 37°C and centrifugation at room temperature. Ten 0.5-ml fractions were collected from the top and analyzed by immunoblotting. Rat IgM (a gift by A. Rolink, University of Basel) and ribosomes prepared from bovine adrenals (Brown et al., 1974
) were used as standards. In a control experiment, 2.5% N-((6-(biotinoyl)amino)hexanoyl)-1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine (biotin-DPPE; Molecular Probes) was in addition incorporated into the liposomes, and an AP-1 recruitment experiment was performed in the presence of 20 µg FITC-streptavidin (from Serotech, Basel, Switzerland) followed by floatation, solubilization, and velocity sedimentation as above. FITC-streptavidin was quantified by fluorimetry.
GTPase Assay
Assays were performed essentially as described (Huber et al., 2001
). Arf1 (4 µM) was loaded with [
-32P]GTP (2.5 µM at
100 Ci/mmol; from NEN, Geneva, Switzerland) by incubation with peptidoliposomes (1 mg soybean phospholipids/ml) in 25 mM MOPS, pH 7.5, 100 mM KCl, 1 mM MgCl2, 2 mM EDTA for 15 min at 30°C, and loading was terminated by addition of 2 mM MgCl2. Loading efficiency was typically 4050% of initial [
-32P]GTP as determined by filtration through a 0.45-µm nitrocellulose filter. To diminish inorganic [32P]phosphate background, the sample was centrifuged at 20,000 x g for 20 min at 4°C, and the liposome pellet was resuspended in 25 mM MOPS, pH 7.5, 5 mM MgCl2, 40 mM KCl, 1 mM DTT. [
-32P]GTP-loaded Arf1, 40 nM, was preincubated for 5 min at 30°C in 25 µl of the same buffer with or without 0.25 µM coatomer or AP-1. Reactions were initiated by the addition of ArfGAP1 (0.1 µM catalytic domain or 0.5 nM full-length ArfGAP1) and terminated by addition of 20 µl of 0.5% SDS followed by 0.5 ml cold charcoal suspension (5% in 50 mM NaH2PO4). After centrifugation, the amount of inorganic [32P]phosphate in the supernatant was determined by scintillation counting and corrected for initial background.
Immunofluorescence
The cDNAs of full-length ArfGAP1 and the catalytic domain ArfGAP1(1136), both C-terminally fused to a myc-epitope and a His6-tag in pcDNA3.1/myc-His (Invitrogen Life Technologies, Basel, Switzerland) were transfected into COS-1 cells grown on 14-mm glass coverslips using lipofectin (Life Technologies). The cells were fixed with 3% paraformaldehyde for 15 min at room temperature 2 d after transfection, washed in phosphate-buffered saline (PBS), quenched with 50 mM NH4Cl in PBS, and permeabilized with 0.1% Triton X-100 for 10 min. Nonspecific antibody binding was blocked with PBS containing 1% bovine serum albumin. The fixed cells were incubated at room temperature with anti-
-adaptin (100/3) and rabbit anti-myc antiserum (Abcam, Cambridge, United Kingdom) for 1 h, washed with PBS with albumin, and stained with Alexa488-conjugated goat anti-mouse and Alexa568- conjugated goat anti-rabbit immunoglobulin (Ig) antibodies (Molecular Probes) in PBS with albumin for 30 min. After several washes with PBS with albumin, PBS, and water, the coverslips were mounted in Mowiol 488 (Hoechst, Frankfurt, Germany). Staining patterns were analyzed using a Zeiss Axioplan 2 microscope (Oberkochen, Germany) with a KX Series Imaging System (Apogee Instruments, Tucson, AZ).
| RESULTS |
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900 kDa (19 S) and 40 S ribosomes of
1400 kDa were found in fractions 34 and 78 of such a gradient, respectively. Recruited AP-1 was thus present as heterogeneous high-molecular-weight complexes of up to 10 or more units that were resistant to detergent solubilization of the underlying membrane. Similar results were obtained using AP-1 purified to homogeneity (Figure 1B, bottom panel), indicating that only Arf1 and peptidoliposomes are required for AP-1 to oligomerize. To rule out the possibility that AP-1 may be associated with detergent-insoluble membranes or large mixed micelles, a control experiment was performed by incorporating lipid-(DPPE)-coupled biotin into the peptidoliposomes for the simultaneous recruitment of Arf1/AP-1 and of fluorescently labeled streptavidin. After floatation, the liposome fraction was solubilized and centrifuged into a sucrose gradient as before. Whereas again a large fraction of recruited AP-1 sedimented into the gradient, lipid-anchored streptavidin was recovered almost entirely from the three top fractions (Figure 2A). Binding to saturated lipids thus could not explain sedimentation under the conditions used. We furthermore performed experiments using a lipid reagent with unsaturated oleoyl rather than saturated palmitoyl chains to couple the peptides, and octyl glucoside as a detergent that solubilizes ordered lipid domains more potently than Triton X-100. In addition, detergent was added at 37°C to enhance solubilization. Under all these conditions, a significant fraction of recruited AP-1 sedimented into the second half of the gradient or even the bottom fraction (Figure 2B), excluding insoluble lipid domains as the cause of AP-1 sedimentation.
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To test whether the C-terminal appendage (ear) domains of
- or
1-adaptins are involved in forming the oligomers, purified AP-1 adaptors were subjected to limited proteolysis by trypsin. As shown in Figure 3A, the ear domains of the two adaptins were efficiently removed, whereas the µ1 subunit remained largely intact. Both the mock-treated and the trypsinized AP-1 preparations were strongly recruited to peptido-liposomes as shown by immunoblot analysis for µ1 and
, and µ1 and the
1 core, respectively, after a floatation gradient (Figure 3B). This is consistent with the earlier observation that AP-1 appendages are dispensible for recruitment to Golgi membranes (Traub et al., 1995
). On detergent solubilization of the floated liposome fractions, both the intact AP-1 complexes and (even more effectively) the shaved AP-1 core domains sedimented as high-molecular-weight complexes (Figure 3C). This result indicates that the appendage domains of
1 and
adaptins are not required for oligomer formation.
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-adaptin subunit of AP-1 and to be present in purified CCVs (Hirst et al., 2003
To examine the functional interaction of ArfGAP1 with AP-1 in vivo, we tested the effect of overexpression of ArfGAP1 on AP-1 localization in transfected COS-1 cells. In confirmation of a previous report (Janvier et al., 2003
), overexpression of full-length ArfGAP1 strongly reduced Golgi-localized AP-1 (Figure 5, A and B). In addition, AP-1 localization to peripheral structures representing endosomes was also reduced, which argues against an indirect effect of ArfGAP1 on Golgi organization via COPI (Aoe et al., 1997
). Overexpression of the catalytic domain of ArfGAP1 (residues 1136) did not reduce membrane association of AP-1, demonstrating that, as in the COPI system (Huber et al., 1998
), the noncatalytic domain of ArfGAP1 is required for membrane targeting and in vivo activity. The effect of ArfGAP1 overexpression on AP-1 localization in vivo together with the previous finding that ArfGAP1 interacts with the
appendage of AP-1 (Hirst et al., 2003
) suggests a functional role for ArfGAP1 in the formation of AP-1/clathrin coats.
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-32P]GTP on liposomes presenting either the LY or the control LA peptide, and the effect of coat proteins on GAP-dependent GTP hydrolysis was monitored. Because a previous study (Szafer et al., 2000
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Sorting Signals Are Necessary for Oligomerization of AP-1 in the Presence of Cytosol and Modulate GTP Hydrolysis
To study the role of sorting signals in coat formation, we analyzed the recruitment of AP-1 from cytosol to soybean liposomes. It has been observed that in the presence of cytosol, AP-1 can be bound to liposomes even in the absence of cargo signals (Zhu et al., 1999
; Crottet et al., 2002
). As shown in Figure 7A, binding of AP-1 recruited from cytosol in the presence of GMP-PNP to liposomes with or without LY peptides was equally stable, because AP-1 remained quantitatively associated with the liposomes during a second floatation (b). This is consistent with the proposal that AP-1 can be bound to a cytosol-derived "docking component(s)" (Zhu et al., 1999
). However, solubilization of the membrane and velocity centrifugation (c) revealed that only AP-1 recruited to membranes presenting the functional sorting peptide assembled into oligomers.
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| DISCUSSION |
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1- and
-adaptins, including the hinge segments which contain the clathrin-binding sites.
The AP-1 oligomers we have observed might correspond to the AP-1 structures detected in cells where clathrin had been sequestered away by overexpression of auxilin or AP180 (Zhao et al., 2001
). Rather than collecting individual adaptors into a coat, clathrin may use oligomers of AP-1 as platforms for its own recruitment and polymerization. Adaptor self-oligomerization may also be the basis for the formation of AP-3 coats, which do not always require clathrin to produce vesicles (Faundez et al., 1998
; Shi et al., 1998
). Another system where the coat assembles in two layers is the COPII coat. Sar1·GTP and the Sec23/24 dimer first associate with the membrane and in turn recruit the filamentous Sec13/31 coat. Whether Sec23/24 also oligomerizes upon recruitment with Sar1·GTP before association with Sec13/31 remains to be tested.
Although AP-1 could also be recruited to liposomes lacking LY peptides when cytosol was present, AP-1 oligomerization only occurred when sorting signals were present. This is reminiscent of the observation that coatomer and AP-2 oligomerize in solution when exposed to high concentrations of sorting peptides (Reinhard et al., 1999
; Haucke and Krauss, 2002
). However, AP-1 oligomerization is in addition dependent on Arf1·GTP, because ArfGAP1-induced GTP hydrolysis triggered disassembly of the oligomers and the release of AP-1 from the membrane. This is also reflected in vivo where overexpression of ArfGAP1 strongly reduces membrane association of AP-1 throughout the cell.
One of our main findings is that AP-1 stimulates ArfGAP1-induced GTP hydrolysis on Arf1. The interaction observed in vitro between the appendage domain of
-adaptin and the C-terminal noncatalytic portion of ArfGAP1 (Hirst et al., 2003
) cannot by itself be responsible for GAP stimulation by AP-1, because the catalytic domain of ArfGAP1 (residues 1136) was also stimulated by AP-1. This suggests the existence of a second AP-1 interaction site residing in the catalytic part of ArfGAP1. A similar two-site interaction of ArfGAP1 with coat has recently been described in the COPI system (Lee et al., 2005
), where coatomer also efficiently stimulates the activity of the catalytic fragment of ArfGAP1 (Figure 6A and Goldberg, 1999
). Alternatively, binding of AP-1 to Arf1·GTP might render Arf1 more sensitive to ArfGAP1.
GAP stimulation by AP-1 was found to be signal-dependent (Figure 6B). The simplest explanation for this observation is that in the absence of cytosol, sorting signals are required to recruit AP-1 to liposomes and thus bring it into proximity with the membrane-associated Arf1·GTP. Our finding that coatomer stimulates the activity of ArfGAP1 catalytic fragment independently of sorting peptides is in line with the observation that coatomer interacts with soybean liposomes independently of COPI cargo signals (Drake et al., 2000
).
Cytosol-mediated recruitment of AP-1 to liposomes lacking sorting signals was stable only in the presence of non-hydrolyzable GTP analogs or a GTPase-deficient Arf1 mutant. In the presence of GTP, recruitment was short-lived, suggesting that the AP-1/Arf1·GTP complex in association with the cytosolic factor is highly susceptible to cytosolic GAPs. By contrast, AP-1 recruited in the presence of GTP and sorting signals was rather stably associated with liposomes, regardless of the presence of cytosol. Even after removal of the bulk of cytosol by floatation of the liposomes, AP-1 was clearly more sensitive to added ArfGAP1 when recruited in the absence of sorting signals (Figure 7D). This suggests a role of sorting signal in the regulation of GTP hydrolysis. Tyrosine-containing signals appear to reduce AP-1-dependent stimulation of ArfGAP1 activity. Such inhibition could be mediated by the interaction of tyrosine signals with AP-1 and/or with ArfGAP1, similar to the previously described inhibitory effect of the p24a cytosolic peptide on ArfGAP1 activity (Goldberg, 2000
; Lanoix et al., 2001
). In the GAP activity measurements (Figure 6), because signals were required for AP-1 recruitment to the liposome, this inhibited level of GAP stimulation was determined.
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The fact that only traces of Arf1 are detectable in purified CCVs (Zhu et al., 1998
) suggests that GTP hydrolysis does not necessarily cause uncoating of the full coat. In our assays using cytosol, we were unable to detect significant amounts of clathrin with the floated liposomes (unpublished data), suggesting that under the conditions used clathrin recruitment and coat completion was not reconstituted. Disassembly of the clathrin layer of CCVs was shown to be catalyzed by hsc70 and its cofactor auxilin or auxilin2/cyclin G-associated kinase (GAK; Ungewickell et al., 1995
; Umeda et al., 2000
). On clathrin release, the AP-1 layer without active Arf1 is already prepared for dissociation. In addition to this mechanism, it has been shown that phosphorylation of µ1, most likely by GAK, enhances interaction with mannose-6-phosphate receptors, but not with tyrosine motifs as used here, and that dephosphorylation by protein phosphatase 2A stimulates AP-1 release from CCVs in the presence of hsc70 (Ghosh and Kornfeld, 2003
). Although GAP activity may not be sufficient for the late stages of CCV disassembly, our results indicate that ArfGAP1 participates in the initial steps of coat formation. Because the rate of GTP hydrolysis is regulated by AP-1 and cargo availability, the Arf1 GTPase and its GAP contribute to cargo recruitment and productive coat formation.
| ACKNOWLEDGMENTS |
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| Footnotes |
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Abbreviations used: AP, adaptor protein; Arf1, ADP-ribosylation factor 1; CCV, clathrin-coated vesicle; COP, coat protein; GAK, cyclin G-associated kinase; GAP, GTPase-activating protein; GEF, guanine nucleotide exchange factor; GMP-PNP, guanylyl imido-diphosphate; Lamp-1, lysosome-associated membrane protein-1; MMCC-DPPE or -DOPE, N-((4-maleimidylmethyl)cyclohexane-1-carbonyl)-1,2-dipalmitoyl- or -dioleoyl-sn-glycero-3-phosphoethanolamine.
These authors contributed equally to this work. ![]()
Address correspondence to: Martin Spiess (Martin.Spiess{at}unibas.ch).
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