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Vol. 16, Issue 6, 2934-2946, June 2005
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* Laboratory of Molecular Genetics, RIKEN Tsukuba Institute, Tsukuba, Ibaraki 305-0074, Japan;
Graduate School of Comprehensive Human Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8577, Japan
Submitted November 17, 2004;
Revised January 25, 2005;
Accepted March 5, 2005
Monitoring Editor: Carl-Henrik Heldin
| ABSTRACT |
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| INTRODUCTION |
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The physiological roles played by ATF-2 have been analyzed by using mutant mice. Null Atf-2 mutant mice die shortly after birth and display symptoms of severe respiratory distress and have lungs filled with meconium (Maekawa et al., 1999
). In the mutant embryos, hypoxia occurs, which may lead to strong gasping respiration with the consequent aspiration of the amniotic fluid containing meconium. This is due to the impaired development of cytotrophoblast cells in the placenta that in turn is caused by decreased levels of expression of the platelet-derived growth factor receptor
. In addition, another Atf-2 mutant mouse, which expresses only a fragment of ATF-2, exhibits lowered postnatal viability and growth, a defect in endochondrial ossification, and reduced numbers of cerebellar Purkinje cells (Reimold et al., 1996
). However, the physiological roles played by the other ATF-2 family proteins remain unknown.
Because Drosophila has a low degree of gene redundancy and therefore fewer related genes compared with mammals, it is sometimes advantageous to analyze the Drosophila homologue of a mammalian gene of interest when trying to determine its function. Moreover, if appropriate Drosophila mutants are available, a variety of genetic experiments can be performed to identify the in vivo function of the gene in question. In Drosophila, three members of the mitogen-activated protein kinase (MAPK) protein family have been identified: Rolled (Erk homologue), dJNK (JNK homologue, also called Basket), and dp38a and dp38b (p38 homologue). Rolled mediates various receptor tyrosine kinase signals in the process of tracheal elaboration, cell proliferation, mesodermal patterning, R7 photoreceptor cell differentiation, and differentiation of terminal embryonic structures (Biggs et al., 1994
; Brunner et al., 1994
; Gabay et al., 1997a
,b
). On the other hand, the pathway containing Hemipterous (Hep; MAPK kinase [MAPKK] homologue), dJNK, and Drosophila Jun (dJun) is involved in dorsal closure during embryo development (Glise et al., 1995
; Glise and Noselli, 1997
; Hou et al., 1997
; Riesgo-Escovar et al., 1996
; Sluss et al., 1996
; Riesgo-Escovar and Hafen, 1997
). All mutants of this pathway exhibit the dorsal open phenotype and a decreased level of the expression of Decapentaplegic (Dpp), a secretory ligand belonging to the transforming growth factor (TGF)-
superfamily, in leading edge cells. With regard to the dp38s, they are phosphorylated by various stresses, including UV, lipopolysaccharide (LPS), and osmotic stress (Han et al., 1998a
,b
). The phenotype resulting from the ectopic expression of the dominant negative (DN) dp38b in the wing imaginal disc indicates that dp38b functions downstream of thickvein (Tkv), a type I receptor of the Dpp ligand, in wing morphogenesis (Adachi-Yamada et al., 1999
).
To determine the in vivo function of ATF-2, we identified and characterized the Drosophila ATF-2 homologue (dATF-2). These studies are reported here and show that dATF-2 is directly phosphorylated by dp38b but not by dJNK. Moreover, genetic analyses indicated that dATF-2 acts in the dp38 signaling pathway. In addition, DNA array analysis demonstrated that dATF-2 is a major transcriptional activator of osmotic stress-inducible genes.
| MATERIALS AND METHODS |
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Detection of Endogenous dATF-2
Schneider S2 cells were cultured at 25°C in the Schneider's Drosophila medium (Invitrogen, Carlsbad, CA) supplemented with 10% of fetal bovine serum. Cells were lysed in radioimmunoprecipitation assay (RIPA) buffer (50 mM Tris-HCl, pH 8.0, 150 mM NaCl, 1% NP-40, 0.5% sodium deoxycholate, 0.1% SDS, 1 mM sodium orthovanadate, 1 mM
-glycerophosphate, 25 mM NaF, and protease inhibitor cocktail) on ice for 10 min. Clarified lysate were collected by centrifugation, and 200 µg of total lysate protein was resolved by SDS-PAGE by using 4-12% gradient gel, followed by Western blotting by using the rabbit anti-dATF-2 antibody that was raised against Pseudomonas toxin full-length dATF-2 fusion protein. To exogenously express dATF-2, the plasmid expressing N-terminally FLAG-tagged dATF-2 was constructed by inserting the dATF-2 cDNA downstream of the Drosophila actin 5C promoter (Thummel et al., 1988
). S2 cells were transfected with the dATF-2 expression plasmid by using CaPO4 method. Two days later, the lysates were prepared as described above, and 10 µg of total lysate protein was use for Western blotting. To produce the dATF-2 double-stranded RNA (dsRNA), the 300-base pair EcoRI-PstI fragment of the dATF-2 cDNA was inserted into pBlue-script II vector. Both strands of the dATF-2 cDNA fragment were transcribed in vitro by using T7 or T3 RNA polymerase and then annealed. For RNA interference experiment, 4 x 106 of S2 cells were plated in 3 ml of serum-free medium. dsRNA (50 µg) was added directly to the medium, and the cells were rocked for 30 min at room temperature. Seven milliliters of medium supplemented with 10% fetal calf serum was added, and the cells were incubated at 25°C for 4 d, and cell lysates were prepared as described above.
Dimer Formation Assays
Glutathione S-transferase (GST) pull-down assays with various mutants of GST-dATF-2 and in vitro-translated full-length dATF-2 were performed essentially as described previously (Dai et al., 1996
). The binding buffer contained 20 mM HEPES, pH 7.7, 150 mM KCl, 0.1 mM EDTA, 2.5 mM MgCl2, 1% skim milk, 1 mM dithiothreitol (DTT), and 0.05% NP-40.
Gel Shift Assays
The gel shift assay was performed essentially as described previously (Maekawa et al., 1989
). Briefly,
0.1-0.4 µg of purified GST-dATF-2 proteins containing various regions of dATF-2 was incubated for 1 h at 25°C with a 32P-labeled oligonucleotide in a solution containing 10 mM Tris-HCl, pH 7.9, 50 mM KCl, 1 mM DTT, 0.04% NP-40, 1 µg of poly(dI-dC), and 5% glycerol. The reaction mixture was separated by a 4% PAGE in 0.5x TGE buffer (25 mM Tris-HCl, 19 mM glycine, and 1 mM EDTA). This was followed by autoradiography. The sequences of oligonucleotides used as probes are as follows: 5'-TCGGGAAAATGACGTCATCTCCAGC-3' (ATF/CRE) (Hai et al., 1989
) and 5'-TCGGGAAAATGAAGTGATCTCCAGA-3' (mutant ATF/CRE) (Hai et al., 1989
).
In Vitro Kinase Assay
Bacterial lysates containing GST-dJNK, GST-dp38b, GST-HEP, GST-dMKK3, and various forms of GST-dATF-2 were prepared and mixed with glutathione-Sepharose beads. After washing, the bound proteins were eluted with elution buffer (100 mM Tris-HCl, pH 8.0, 20 mM glutathione, and 120 mM NaCl) and dialyzed overnight in kinase buffer (20 mM HEPES, pH 7.4, 20 mM MgCl2, 25 mM
-glycerophosphate, 0.1 mM Na3VO4, and 2 mM DTT). Approximately 1 µg of kinase protein and 1 µg of GST-dATF-2 were incubated for 1 h at 30°C in kinase buffer in the presence of [
-32P]ATP. The proteins were then analyzed by SDS-PAGE followed by autoradiography.
In Vivo Kinase Assays
S2 cells were transfected with the FLAG-dATF-2 expression plasmid by using CaPO4 method. Two days later, the cells were irradiated by UV (100 J/m2) or treated with 0.5 M sorbitol for 15 min and further cultivated for various times. The cells were then disrupted by using RIPA buffer (50 mM Tris-HCl, pH 7.4, 150 mM NaCl, 1% Triton X-100, 1% sodium deoxycholate, 0.1% SDS, 25 mM NaF, 25 mM
-glycerophosphate, and 0.1 mM Na3VO4) containing a protease inhibitor mixture (Roche Diagnostics, Mannheim, Germany), and the lysates were subjected to SDS-PAGE, followed by Western blotting with an anti-FLAG monoclonal antibody (mAb) (M5; Sigma-Aldrich, St. Louis, MO). For the phosphatase treatment, cell lysates were prepared using the lysis buffer (50 mM HEPES, pH 7.5, 250 mM NaCl, 0.2 mM EDTA, and 0.5% NP-40) containing a protease inhibitor, and FLAG-dATF-2 was immunoprecipitated with the anti-FLAG antibody. The immunocomplexes were then suspended with phosphatase buffer (50 mM Tris-HCl, pH 7.5, 0.1 mM EDTA, 2 mM MnCl2, 5 mM DTT, and 0.01% Brij35) and incubated with
-phosphatase for 30 min at 16°C. The reaction was terminated by adding SDS-sample buffer. The proteins were analyzed by Western blotting with a rabbit antibody raised against GST-dATF-2(1-150).
In Vivo Labeling of dATF-2
S2 cells were transfected with the FLAG-dATF-2 expression vector and labeled with [32P]orthophosphate for 4 h. Lysates were prepared from the transfected cells using lysis buffer (20 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1% Triton X-100, 10% glycerol, 4 mM EDTA, 1 mM DTT, 10 mM Na4P2O7, 10 mM NaF, 2 mM Na3VO4, and protease inhibitor), and the dATF-2 proteins were immunoprecipitated with anti-FLAG antibody, and analyzed by SDS-PAGE, followed by autoradiography.
Luciferase Reporter Assays
The GAL4-dATF-2 expression plasmid was constructed by a PCR-based method by using the cytomegalovirus promoter-containing vector pCMX (Umesono et al., 1991
). The luciferase reporter (3GAL-TK-luc; 1 µg), in which three copies of GAL4-binding site and the firefly luciferase gene are linked to the thymidine kinase promoter, was transfected into S2 cells together with the GAL4-dATF-2 expression plasmid (1, 2, or 4 µg) and the internal control plasmid pRL-CMV (0.2 µg) by the CaPO4 method. The total amount of plasmid DNA introduced was adjusted to 10 µg with the empty vector. Luciferase activities were measured by using the dual luciferase assay system (Promega, Madison, WI). In the experiments using the CRE-containing reporter (4CRE-Adh-luc), in which four copies of ATF/CRE sites and the firefly luciferase gene are linked to the Drosophila alcohol dehydrogenase gene promoter, a mixture of 1 µg of the reporter, 0.5 µg of the dATF-2 expression plasmid, and 0.2 µg of pRL-CMV was transfected into S2 cells. To examine the effect of dJNK/Hep or dp38/dMKK3 on dATF-2-induced transcriptional activation, a mixture of 4CRE-Adh-luc reporter (1 µg), pact5C-FLAG-dATF-2 (1.5 µg), pact5C-HA-dJNK or pact5C-HA-dp38b (1 µg), pact5C-Hep or pact5C-dMKK3 (0.5 or 2 µg), and the internal control plasmid pact5C-retina-luc (50 ng) was transfected into S2 cells. Alternatively, a mixture of 3GAL4-TK-luc reporter (1 µg), pCMV-GAL4-dATF-2 or pCMV-GAL4-dJun (2 µg), pact5C-HA-dJNK or pact5C-HA-dp38b (0.5 µg), pact5C-Hep or pact5C-dMKK3 (0.5 or 2 µg), and pact5C-retina-luc (50 ng) was transfected into S2 cells. In both cases, the total amount of plasmid DNA was adjusted to 10 µg with the empty vector. To examine the effect of SB203580 on the dATF-2 induced transcriptional activation, 1 µg of 4CRE-Adh-luc reporter was transfected into S2 cells together with 1 µg of pact5C-FLAG-dATF. Twenty-four hours after transfection, SB203580 was added to the medium at a final concentration of 0.4, 2, 5, or 10 µM.
In Situ Hybridization
Wild-type embryos ranging from 0 to 16 h old were prepared and in situ hybridization was carried out essentially as described by Han et al. (1998b
). Riboprobes of dATF-2 were labeled by using a digoxigenin RNA labeling kit (Roche Diagnostics) and hybridized at 45°C. The probes were detected with a mAb against digoxigenin coupled to alkaline phosphatase (ALP) and BM purple as a substrate (Roche Diagnostics).
Injection of dsRNA
The dATF-2 dsRNA RNA precipitates were dissolved in injection buffer (5 mM KCl and 0.1 mM Na2HPO4, pH 6.8) to a final concentration of 10 µM. Embryos were collected over a 30-50-min period at 25°C, dechorionated (in 25% NaClO), and attached to a coverslip with double stick tape. The embryos were then desiccated and covered with Voltalef H 10S oil (Elf Atochem, Paris, France). Most embryos were injected at the precellular blastoderm stage. The location of the injection was on the ventral side (15-80% egg length). Cuticle preparation was performed according to a standard protocol except that the embryos were not fixed before mounting.
Fly Strains
Drosophila cultures and crosses were carried out by standard procedures at 25°C. The DNA fragment encoding the C-terminal 152 amino acids (amino acids 230-381) of dATF-2 was cloned into pUAST, a GAL4-responsive vector (Brand and Perrimon, 1993
), to generate pUAST-dATF-2bZIP (DN-dATF-2). To test for modification of the DN-dATF-2 phenotype, a transgenic strain carrying pUAST-D-MEKK1a or pUAST-p38bDN (Inoue et al., 2001
) was used. bsk1 is a null mutant of the bsk (dJNK) gene (26).
Sensitivity to Osmotic Stress
Parent flies were allowed to lay eggs every day while feeding on a diet containing the indicated concentrations of NaCl. The viability was calculated from the number of adult flies per the number of first larvae derived from mating hs-GAL4 females with upstream activating sequence (UAS) transgenic males.
DNA Microarrays
S2 cells were plated on a 10-cm dish to achieve 10% confluence, and a mixture of 1 µg of the dATF-2 ds-RNA; 2 µg of the pAct5C-EGFP plasmid, in which the Drosophila actin 5C promoter was linked to the enhanced green fluorescent protein (EGFP) cDNA; and 13 µg of the empty control vector pAct5C0 was transfected by the CaPO4 method. Two days after transfection, the cells were treated with 0.5 M sorbitol for 15 min, and further cultivated for 3 h. The cells expressing EGFP were obtained by cell sorting using FACSort (BD Biosciences, San Jose, CA). Immediately after sorting, the cells were mixed with TRIzol reagent (Invitrogen), and biotin-labeled RNA for GeneChip analysis was then prepared according to the GeneChip eukaryotic small sample target labeling assay version II protocol, which is available on the Affymetrix Web site at http://www.affymetrix.com/support/technical/technotes/smallv2_technote.pdf. The Drosophila genome array that contains >13,500 probe sets (Affymetrix) was used for the assay
| RESULTS |
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1.35 kb (Figure 1B). The protein encoded by this clone is significantly homologous to human ATF-2. Thus, we designated this protein as dATF-2. The homology between dATF-2 and human ATF-2 was found in three region, namely, the N-terminal region around the SAPK phosphorylation sites, the basic region, and the leucine zipper region (59, 40, and 35% identity, respectively) (Figure 1C). dATF-2 also has the similar degree of homology with human ATFa and CRE-BPa in these two regions, because three members of ATF-2 subfamily (ATF-2, ATFa, and CRE-BPa) have a high homology in these regions. The entire regions of the two proteins share 39% identity and 47% similarity. The dATF-2 gene, which is located at 2R-60E4, consisted of two exons (Figure 1D). However, the database of the Berkley Drosophila Genome Project contains a cDNA sequence denoted as CG30420-PA (Figure 1D) that only contains the first exon of dATF-2 and an additional 2.0-kb region. However, we could not detect 3.3-kb mRNA by using the dATF-2 probe, which suggests that this cDNA may have been artificially generated during the cDNA cloning.
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Formation of dATF-2 Dimers and Their Binding to CRE
We examined the capacity of dATF-2 to form homodimers and heterodimers. Thus, various GST-dATF-2 fusion proteins, which consist of the amino acids 152-381 of dATF-2 with various mutations of the leucine zipper (Figure 2A, left), were prepared and mixed with the in vitro-translated full-length dATF-2. The in vitro-translated dATF-2 efficiently bound to the wild-type GST-dATF-2, which indicates that dATF-2 forms a homodimer (Figure 2A, right). Mutations of the C-terminal two leucines into valines (L34V) did not abrogate homodimer formation. However, when the same leucines were replaced with prolines (L34P), or when all four leucines were replaced by valine (L1234V), or when the whole leucine zipper region was deleted (
LZ), GST-dATF-2 failed to bind. Thus, the leucine zipper structure is critical in the formation of a dATF-2 homodimer, which is also true for mammalian ATF-2 (Matsuda et al., 1991
). Next, we tested whether the N-terminal portion of dATF-2 can intramolecularly interact with its C-terminal region (Figure 2B). GST pull-down assays showed that the in vitro-translated dATF-2 bound efficiently to GST fusion protein containing the C-terminal half of dATF-2, but not to the GST fusion containing its N-terminal half.
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To determine whether dATF-2 can bind to the same DNA sequence as mammalian ATF-2, we prepared three GST-dATF-2 fusion proteins containing various regions of dATF-2 and used them in gel retardation assays (Figure 2, C and D). The DNA probe used contained the artificial sequence derived from the adenovirus early EIIaE promoter that has the consensus CRE (ATF/CRE probe) (Hai et al., 1989
). All three GST-dATF-2 fusion proteins formed protein-DNA complexes whose mobility depended on their molecular weights, whereas the probe was not retarded by the control GST protein (Figure 2D). These results indicate that a dATF-2 homodimer binds to the consensus CRE sequence. To confirm the specificity of sequence recognition by dATF-2, a mutated CRE probe containing two base mutations in the CRE sequence was used. GST-dATF-2 was not able to bind to this mutant probe in gel shift assays (Figure 2E, left). Furthermore, in competition experiments, this mutant DNA did not block the binding of dATF-2 to CRE (Figure 2E, right). Thus, dATF-2 specifically binds to the CRE.
In Vitro Phosphorylation of dATF-2 by dp38
To investigate whether, like mammalian ATF-2, dATF-2 can be phosphorylated by SAPKs, we performed in vitro kinase assays by using recombinant proteins. GST-dATF-2 or GST-dJun served as the substrate, whereas the GST fusion containing dp38b or dJNK acted as the kinase. These proteins were mixed and then incubated with [
-32P]ATP. Interestingly, dATF-2 was phosphorylated by dp38b, but not by dJNK (Figure 3A). However, dJun was phosphorylated by both dp38b and dJNK to a similar degree. In mammals, the reverse is true because ATF-2 is phosphorylated by both p38 and JNK, whereas Jun is phosphorylated only by JNK (Han et al., 1998b
).
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Based on its homology to vertebrate ATF-2, it is likely that the Thr-59 and Thr-61 residues of dATF-2 are dp38 phosphorylation sites. To investigate this, either or both residues were substituted with alanine (T59A, T61A, and T59/61A), and the resulting proteins were used in in vitro kinase assays with GST-dp38b (Figure 3B). The T59A and T61A mutants were only weakly phosphorylated by GST-dp38b, and the T59/61A mutant was not phosphorylated at all. Thus, dp38b directly phosphorylates dATF-2 at Thr-59 and Thr-61.
dp38 and dJNK are phosphorylated and up-regulated by their upstream kinases in their signaling pathways. These kinases are dMKK3 (Drosophila MAPKK 3) and Hep, respectively. To examine the effect of these MAPKKs on dATF-2 phosphorylation by dp38b and dJNK, recombinant GST-dMKK3 and GST-Hep were prepared and added to in vitro kinase assay mixtures containing dATF-2 and dp38b or dJNK (Figure 3C, left). As expected, the level of dp38b-induced phosphorylation of dATF-2 was significantly increased when GST-dMKK3 was present. In contrast, dATF-2 was not phosphorylated at all by GST-dJNK, even if GST-Hep was present. In addition, we found that dp38a can phosphorylate dATF-2 and that this is enhanced by dMKK3 (Figure 3C, right). Thus, dATF-2 is a nuclear target of the dMKK3-dp38 pathway but not the Hep-dJnk pathway.
Stress-induced Phosphorylation of dATF-2
We next studied whether dATF-2 is phosphorylated by p38 in vivo in response to various stresses. Thus, Drosophila S2 cells were transfected with the FLAG-dATF-2 expression plasmid, exposed to UV irradiation or osmotic stress induced by 0.5 M-sorbitol, and then the phosphorylated dATF-2 was detected by Western blotting (Figure 3D). The phosphorylated dATF-2 bands showing slow migration occurred 15 min after UV irradiation or the addition of sorbitol, and they continued to be detected until 60 min after the stress treatment. Treatment of the cell extracts with
-phosphatase converted nearly all of the slowly migrating bands into faster migrating bands (Figure 3E, left), which confirms that the retarded bands correspond to the phosphorylated forms of dATF-2. We next examined whether Thr-59 and Thr-61, both of which are phosphorylated by dp38b in vitro, were phosphorylated in vivo in response to the stress. When S2 cells were transfected with the plasmid that expresses the T59/61A mutant of FLAG-dATF-2, no slowly migrating bands were detected, even after UV irradiation and osmotic stress (Figure 3E, right). Thus, Thr-59 and Thr-61 are phosphorylated in vivo in response to stress.
To investigate whether dp38 is the kinase that phosphorylates dATF-2 in vivo, we used the imidazole compound SB203580 (Lee et al., 1994
), a mammalian p38-specific inhibitor. SB203580 cannot inhibit JNK activity but inhibits not only mammalian p38 but also dp38 (Han et al., 1998). We found that SB203580 inhibited the osmotic stress-induced in vivo phosphorylation of dATF-2 in a dose-dependent manner (Figure 3F), which indicates that dp38 is a major kinase that phosphorylates dATF-2 in vivo in response to stress. To further confirm that the dMKK3-dp38 pathway induces the phosphorylation of dATF-2, we investigated the effect of dp38 and dMKK3 on the in vivo phosphorylation of dATF-2 (Figure 3G). Overexpression of dp38b with FLAG-dATF-2 slightly enhanced dATF-2 phosphorylation, even in the absence of stress (Figure 3G, top). Moreover, the phosphorylation levels of dATF-2 were strongly enhanced by the coexpression of dp38b and dMKK3. Similar results were obtained with dp38a (Figure 3G, bottom). On the other hand, overexpression of dMKK3 together with the DN form of dp38b (AGF), whose dMKK3 phosphorylation sites have been mutated, did not induce the phosphorylation of dATF-2 at all (Figure 3G, top). Furthermore, we observed that overexpression of both dJNK and Hep had no effect on the phosphorylation of dATF-2 (our unpublished data). These results indicate that dATF-2 is an in vivo target of the dMKK3-dp38 MAPK pathway, but not the Hep-dJNK pathway.
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Transcriptional Activation by dATF-2
To examine whether, like mammalian ATF-2, the N-terminal region of dATF-2, which contains the dp38b phosphorylation sites, can act as a transcriptional activation domain, various forms of dATF-2 were fused to the DNA binding domain (DBD) of GAL4 and their trans-activating capacity was investigated (Figure 4A). Thus, S2 cells were transfected with the GAL4 site-containing reporter together with the plasmid that expresses one of the GAL4-dATF-2 fusion proteins, and the luciferase activity was measured (Figure 4A). The GAL4-fusions containing the full-length dATF-2 and the N-terminal 274 amino acids had similar trans-activating capacities, whereas the GAL4-dATF-2 fusions containing the N-terminal 150 amino acids had a stronger activity. Consistent with this was that the GAL4-dATF-2 fusions lacking the N-terminal 150 amino acids of dATF-2 did not enhance luciferase expression at all. These results indicate that the N-terminal 150 amino acid region of dATF-2 acts as the transcriptional activation domain and also that the C-terminal half of dATF-2 has an inhibitory effect on N-terminal region-dependent transactivation. This also has been observed with mammalian ATF-2 (Li and Green, 1996
). Furthermore, alanine substitution of the Thr-59 and Thr-61 residues in the GAL4-dATF-2 fusions containing full-length dATF-2 or the N-terminal 150 amino acids dramatically decreased their trans-activating capacities. Thus, the N-terminal region of dATF-2 acts as a transcriptional activation domain in response to its dp38-induced phosphorylation.
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Regulation of dATF-2 Activity by the dMKK3-dp38 Pathway
We next examined the effect of dATF-2 phosphorylation on its trans-activating capacity (Figure 5A). When dp38b was coexpressed with dATF-2 and the CRE-containing luciferase reporter in S2 cells, the dATF-2-dependent stimulation of luciferase expression was enhanced approximately twofold. Coexpression of both dp38b and dMKK3 further enhanced the trans-activating capacity of dATF-2 in a dose-dependent manner, which indicates that the dMKK3-dp38b pathway enhances dATF-2 activity. Similar results were observed with p38a. In contrast, coexpression of dJNK and/or Hep did not stimulate dATF-2 activity.
To further confirm that the trans-activating capacity of dATF-2 is enhanced by the dMKK3-dp38 pathway, we examined the transcriptional activation of GAL4-dATF-2 (Figure 5B). GAL4-dATF-2 stimulated the luciferase expression from the GAL4 site-containing luciferase reporter, and this activity was enhanced by coexpression of dMKK3 and dp38b in a dose-dependent manner. However, coexpression of Hep and dJNK did not enhance GAL4-dATF-2-dependent transcriptional activation. In contrast, the trans-activating capacity of GAL4-dJun was enhanced by the coexpression of Hep and dJNK, but not by the coexpression of dMKK3 and dp38b. We also investigated the effect of SB203580 on the trans-activating capacity of dATF-2 and found that the dATF-2-mediated transcriptional activation from the CRE-containing promoter was inhibited by SB203580 in a dose-dependent manner (Figure 5C). In addition, the dp38b/dMKK3-enhanced dATF-2 activity was also almost completely inhibited by SB203580. These results support the notion that dATF-2-dependent transcriptional activation is enhanced by the dMKK3-dp38 pathway but not by the Hep/dJNK pathway.
Expression of dATF-2 in Drosophila
To examine the pattern of dATF-2 expression during embryogenesis, whole-mount embryos were hybridized with an antisense RNA probe synthesized from a dATF-2 cDNA template. dp38a and dp38b expression also was examined. We found that the dATF-2 gene is expressed throughout embryonic development (Figure 6). A high level of maternal deposition similar to that observed for dMKK3 and dp38 (Han et al., 1998b
) was observed. In the later stages, zygotic expression is present in most tissues. The expression of dATF-2, dp38a, and dp38b is particularly evident in the leading edge of the cells at stage 12 (Figure 6, arrows).
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Genetic Interaction between ATF-2 and dp38
To examine whether dATF-2 functions in the dp38 signaling pathway in vivo, we tested the genetic interaction between dATF-2 and dp38 in wing pattern formation. ATF-2 forms a homodimer and a heterodimer with Jun, but not with CREB, CREM, Fos, and so on (Hai and Curran, 1991
; Matsuda et al., 1991
), and we previously demonstrated that the DN form of ATF-2, which has the b-ZIP domain and lacks the N-terminal activation domain, blocks the function of ATF-2, mainly by squelching normal ATF-2 by forming a dimer via a leucine zipper, not by competing for binding to CRE (Sano et al., 1999
). Therefore, DN-dATF-2 is likely to mainly block the function of dATF-2, not other CREB/ATF. When DN-dATF-2, which contains only the C-terminal b-ZIP domain, was transgenically expressed in flies using the MS1096-GAL4 driver, which directs expression in the whole region of the wing disk (Figure 7B, a), the wing venation was severely distorted and extensive production of fragments of vein material was observed (Figure 7B, c). It was previously reported that the expression of DN-dp38b at high levels, which was generated by alanine substitution of the Thr-183 MAPKK target site, leads to the weak abnormal pattern formation in certain fraction of the adult flies, including the generation of ectopic vein fragments and a reduction in the distance between the veins (Adachi-Yamada et al., 1999
). However, as reported previously (Adachi-Yamada et al., 1999
), when DN-dp38 was expressed at low levels, an aberrant wing phenotype was not induced (Figure 7B, d). We found, however, that when the DN forms of both dATF-2 and dp38b were coexpressed, significantly more severe wing formation defects were observed (Figure 7B, e). This supports the notion that dATF-2 functions in the dp38b signaling pathway. Furthermore, when Drosophila MEKK1 (dMEKK1), a MAPKK kinase that also acts in the p38 MAPK pathway, was expressed in the wing disk using the MS1096-GAL4 driver, severe defects in wing formation were also observed (Figure 7B, f). These defects were partly suppressed by the coexpression of DN-dATF-2 (Figure 7B, g), which supports the notion that dATF-2 acts in the dMEKK1-dp38b pathway.
Expression of DN-dATF-2 by Embryos Leads to Hypersensitivity to Osmotic Stress
The Drosophila MEKK1-dp38 pathway is known to be involved in the response to environmental stresses such as increased osmolarity (Inoue et al., 2001
). To determine whether dATF-2 plays a role together with dp38 in the response to stress, we examined whether the expression of DN-dATF-2 affects the sensitivity of embryos to osmotic stress (Table 1). The expression of DN-dATF-2 was induced by heat shock promoter-GAL4. The embryos showed normal viability when bred into normal culture medium. However, when the culture medium contained 0.2 M NaCl, their viability decreased to
40%. In addition, expression of both DN-dATF-2 and DN-dp38b further decreased the viability to 24%. Furthermore, coexpression of dMEKK1a together with DN-dATF-2 partly suppressed the effect of DN-dATF-2. Thus, dATF-2 functions together with dp38b and dMEKK1a in the response to osmotic stress.
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dATF-2 Is a Major Regulator of Stress-inducible Gene Expression
To investigate whether dATF-2 is needed for stress-induced gene expression, we determined by DNA array analysis how many and which stress-induced genes are regulated by dATF-2. Thus, RNAs prepared from S2 cells treated with or without 0.4 M sorbitol were first subjected to DNA array analysis with the Affymetrix Drosophila genome array, which contains >13,500 transcripts. The results indicated that osmotic stress increased the expression of 107 genes more than twofold. S2 cells were then transfected with dATF-2 dsRNA to down-regulate dATF-2 and treated with sorbitol. RNAs from these cells were then used for array analysis. We confirmed that dATF-2 dsRNA transfection markedly decreased the endogenous dATF-2 protein levels (Figure 1E). The array analysis indicated that introduction of dATF-2 dsRNA decreased the expression levels of 233 genes by more than twofold. Comparison of the 107 genes that were induced by the high osmolarity with the 233 genes that were down-regulated by dATF-2 ds-RNA indicated that 43 genes are common (Figure 8A). This means that
40% of the genes that were induced by osmotic stress are regulated by dATF-2, which indicates that dATF-2 is a major inducer of gene expression upon osmotic stress. These 43 genes include seven immune system genes, six genes encoding cell surface or cuticle proteins, five genes encoding transporters, five genes encoding endopeptidases, and two genes encoding receptors (Figure 8B).
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| DISCUSSION |
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We found that extracellular stress such as UV or osmotic stress induces the dp38-induced phosphorylation of dATF-2 at Thr-59 and Thr-61 and that this increases the trans-activation capacity of dATF-2. Although mammalian ATF-2 is well known to be phosphorylated not only by p38 but also by JNK, we found that dJNK neither directly phosphorylated dATF-2 nor enhanced dATF-2-dependent transcription. Furthermore, transgenic embryos expressing DN-dATF-2 or dATF-2 dsRNA did not clearly reveal the dorsal-open phenotype that is common to the Hep, Bsk, dJun, and dFos mutants (Glise et al., 1995
; Riesgo-Escovar et al., 1996
; Sluss et al., 1996
; Hou et al., 1997
; Riesgo-Escovar and Hafen, 1997
). The entire amino acid sequence of JNK1 shares 65% identity with dJNK (Riesgo-Escovar et al., 1996
; Sluss et al., 1996
), and the
50-amino acid stretch within the N-terminal domain of mammalian ATF-2 that contains the phosphorylation sites is also well conserved in dATF-2 (59% identity). Therefore, it is surprising that dJNK cannot phosphorylate dATF-2, unlike what is observed for mammalian JNK and ATF-2. Furthermore, we found that although dATF-2 is phosphorylated only by dp38, dJun is phosphorylated by both dp38 and dJun (Figure 3A). In contrast, mammalian ATF-2 is phosphorylated by both p38 and JNK, whereas Jun is phosphorylated only by JNK (Han et al., 1998b
). It is worth noting that ATFa is not phosphorylated by JNK (De Graeve et al., 1999
). This may raise the possibility that a regulation mechanism of dATF-2 resembles to that of ATFa, and that an ancestral ATF-2/CRE-BPa gene were derived from a duplicated ATFa-like gene. The relationship between SAPKs and transcription factors in Drosophila and mammals may be useful in understanding how the stress-inducible gene expression system is established during evolution.
The GAL4-dATF-2 fusions containing the N-terminal 150 amino acids had a stronger activity than those containing the N-terminal 274 amino acids (Figure 4A), indicating that the region between amino acids 150 and 274 has a negative effect on the activation domain of dATF-2. In the case of vertebrate ATF-2, the b-ZIP DBD suppresses the ATF-2 activation domain via intramolecular interaction (Li and Green, 1996
). This difference may suggest that the mechanism by which the C-terminal region suppresses the activation domain is different between vertebrate ATF-2 and dATF-2. It is interesting whether the region between amino acids 150 and 274 of dATF-2 affects the stability or conformation of dATF-2 protein. Wild-type dATF-2 stimulated the luciferase expression from the CRE-containing promoter under nonstimulated condition (Figure 4B). Because the alanine mutants of Thr-59 and Thr-61 dramatically decreased this trans-activating capacity of dATF-2, phosphorylation of these residues seems to be essential for trans-activating capacity of dATF-2. These results suggest the possibility that the Thr-59 and Thr-61 residues are phosphorylated at low levels even under nonstimulated condition. This could be due to the low levels of TNF-
or IL-1 involved in serum. Alternatively, other kinase(s) also may phosphorylate these residues, because vertebrate ATF-2 is activated by Raf-MEK-ERK pathway via phosphorylation of Thr-71 (Ouwens et al., 2002
).
Using two different assay systems, we have demonstrated at the genetic level that dATF-2 acts in the dp38 signaling pathway. First, we showed that expression of DN-dp38b enhanced the aberrant wing phenotype caused by DN-dATF-2. It has been reported previously that dp38b acts downstream of the Dpp receptor Tkv, because DN-dp38b expressed in the wing imaginal disc caused a phenotype resemble to the mutant of dpp (decapentaplegic) that is a Drosophila homologue of mammalian bone morphogenetic protein/TGF-
/activi superfamily (Adachi-Yamada et al., 1999
). Therefore, dATF-2 may functions in the Dpp signaling pathway. This may be consistent with our previous finding that mammalian ATF-2 is phosphorylated by TGF-
signaling via TAK1 and p38, and it then directly binds to the Smad3/4 complex to synergistically activate transcription with Smad3/4 (Sano et al., 1999
). We also demonstrated that DN-dp38b coexpression enhanced the sensitivity of embryos expressing DN-dATF-2 to high osmolarity. Thus, dATF-2 acts in the dp38 signaling pathway, at least in wing pattern formation and the response to osmotic stress. However, no oocyte defects were observed in the transgenic flies expressing DN-dATF-2, although the dp38 MAPK pathway is known to be required during oogenesis for asymmetric egg development (Suzanne et al., 1999
). Thus, dATF-2 may function only in some specific events that are regulated by the dp38 signaling pathway.
Our DNA array analysis indicated that
40% of the genes that are induced by osmotic stress are also regulated by dATF-2, which indicates that dATF-2 is a major inducer of osmotic stress-inducible gene expression. These genes encode cell surface and cuticle proteins, transporters, and receptors, and various endopeptidases (Figure 8B). It is not surprising that osmotic stress may increase the production of cell surface proteins, including some receptors. In addition, the endopeptidases may be produced because high osmolarity may increase the denaturation of proteins, which must then be degraded by the cell. The dATF-2 target genes also include seven immune response genes, namely, several encoding antimicrobial peptides and one encoding a peptidoglycan recognition protein, which binds to the peptidoglycans of bacterial cell walls and triggers immune responses (Hoffmann, 2003
). It has been reported that LPS increases the kinase activity of dp38 (Han et al., 1998b
). Consequently, dp38-phosphorylated dATF-2 may directly induce these immune response-related genes. However, it also has been shown that overexpression of dp38 inhibits the expression of immune response genes (Han et al., 1998b
). This could be explained by the possibility that dp38 overexpression may inhibit the p38 signaling pathway by activating negative feedback regulatory mechanisms, such as the p38
-induced decrease of MKK6 mRNA stability in mammalian cells (Ambrosino et al., 2003
). In Drosophila, Gram positive bacteria and fungi predominantly induce the Toll signaling pathway to activate genes such as Drosomycin, whereas Gram negative bacteria activate the Imd pathway to activate genes such as Diptericin (Hoffmann, 2003
). DNA array analysis indicated that both Drosomycin and Diptericin are regulated by dATF-2, which suggests that dATF-2 may be a component of both the Toll and Imd pathways. Further analyses of dATF-2 will most likely enhance our understanding of the molecular mechanisms involved in the Drosophila immune system.
| ACKNOWLEDGMENTS |
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| Footnotes |
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Abbreviations used: dATF-2, Drosophila ATF-2; dp38, Drosophila p38; dsRNA, double-stranded RNA; JNK, Jun NH2-terminal protein kinase; MAPK, mitogen-activated protein kinase; SAPKs, stress-activated protein kinases.
These authors contributed equally to the experimental work. ![]()
Address correspondence to: Shunsuke Ishii (sishii{at}rtc.riken.jp).
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