|
|
|
|
Vol. 16, Issue 8, 3727-3739, August 2005
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||

Department of Biochemistry and Molecular Biology, The Milton S. Hershey Medical Center, The Pennsylvania State University, Hershey, PA 17033-2390
Submitted February 15, 2005;
Revised May 20, 2005;
Accepted May 24, 2005
Monitoring Editor: Randy Schekman
| ABSTRACT |
|---|
|
|
|---|
subunit of eukaryotic initiation factor 2 (eIF2
). Hyperphosphorylation of eIF2
inhibits translation initiation during amino acid starvation. Isoflurane rapidly (in <15 min) inhibits yeast cell division and amino acid uptake. Unexpectedly, phosphorylation of eIF2
decreased dramatically upon initial exposure although hyperphosphorylation occurred later. Translation initiation was inhibited by isoflurane even when eIF2
phosphorylation decreased and this inhibition was GCN-independent. Maintenance of inhibition required GCN-dependent hyperphosphorylation of eIF2
. Thus, two nutrient-sensitive stages displaying unique features promote isoflurane-induced inhibition of translation initiation. The rapid phase is GCN-independent and apparently has not been recognized previously. The maintenance phase is GCN-dependent and requires inhibition of general translation imparted by enhanced eIF2
phosphorylation. Surprisingly, as shown here, the transcription activator Gcn4p does not affect anesthetic response. | INTRODUCTION |
|---|
|
|
|---|
We are taking a molecular genetic approach to investigate the cellular basis of anesthetic action using the yeast S. cerevisiae. Although yeast are less sensitive to anesthetics than mammals (Keil et al., 1996
), we find these drugs inhibit yeast cell division in a manner that remarkably parallels their actions as anesthetics (Keil et al., 1996
; Wolfe et al., 1998
; Koblin, 2000
). These parallels include the following: correlation of lipophilicity and potency (the Meyer-Overton rule; Koblin, 2000
), rapid and reversible effects, a sharp dose-response curve, additivity of partial doses of different anesthetics, and lack of effect in yeast of volatile lipophilic compounds that are nonanesthetic in mammals (nonimmobilizers). These similarities suggest the sites and/or mechanisms responsible for yeast growth arrest and mammalian anesthesia may be closely related.
Previous studies from our laboratory show altered availability of amino acids, in particular leucine or tryptophan, from the external environment plays a key role in the ability of the volatile anesthetic isoflurane to inhibit cell division (Palmer et al., 2002
). Numerous, mutually supportive findings provide evidence for this conclusion: deletion or overexpression of amino acid permeases that transport leucine and/or tryptophan alter anesthetic response in strains auxotrophic for these amino acids; strains prototrophic for leucine and tryptophan are more resistant to isoflurane than auxotrophic strains; increased concentrations of leucine and tryptophan in the growth medium render the auxotrophic strains resistant to volatile anesthetics, whereas decreased concentrations of these amino acids make the strains hypersensitive; and uptake of radiolabeled leucine or tryptophan is inhibited by anesthetic exposure. These findings are consistent with models proposing that anesthetics have a physiologically important effect on availability of at least some amino acids by inhibiting activity of their permeases (Palmer et al., 2002
).
In yeast, amino acid starvation triggers the general amino acid control (GCN) response, an evolutionarily conserved signaling pathway that inhibits translation initiation of almost all mRNAs in yeast but increases transcription of numerous amino acid biosynthetic genes (for reviews see Hinnebusch and Natarajan, 2002
; Jefferson and Kimball, 2003
). Here, we report that although the GCN pathway plays a role in the activity of volatile anesthetics in yeast, another pathway also plays a role in the inhibition of translation initiation. Characterization of the spontaneous isoflurane-resistant zzz3-1 mutant showed ZZZ3 is identical to GCN3. This nonessential gene encodes a component of eukaryotic translation initiation factor 2B (eIF2B). This complex catalyzes a GDP/GTP exchange reaction on eukaryotic initiation factor 2 (eIF2) that is required for reutilization of eIF2 in translation initiation (Hershey, 1991
; Cigan et al., 1993
). Gcn3p is required for regulation of eIF2B activity when eIF2 is phosphorylated (Cigan et al., 1993
; Dever et al., 1993
). We find isoflurane induces phosphorylation of the
subunit of eIF2 (eIF2
) in wild-type cells but only after extended incubation. In contrast, translation initiation is rapidly inhibited by isoflurane before the GCN-mediated hyperphosphorylation of eIF2
. Thus, the GCN pathway is required for maintenance of this inhibition but the immediate arrest of translation initiation is independent of GCN.
| MATERIALS AND METHODS |
|---|
|
|
|---|
-0 mutation (Wolfe et al., 1999
|
PCR reagents as well as restriction and modification enzymes were purchased from various sources and used according to instructions from the manufacturers. Plasmids were propagated in E. coli strain MC1066 (leuB trpC pyrF::Tn5 [Kanr] araT lacX74 del strA hsdR hsdM; obtained from M. Casadaban). Standard procedures for the purification of plasmid (Sambrook et al., 1989
) and yeast (Rose et al., 1990
) DNA were used. Southern hybridizations were performed as described previously (Sambrook et al., 1989
).
Plasmids
Plasmids used in this study are listed in Table 2. Plasmids p1097, p1098, and p1350 (Vazquez de Aldana et al., 1993
), p919 (Dever et al., 1992
), p180 (Hinnebusch, 1985
), p227 (Williams et al., 1989
), p27-1 (Wek et al., 1992
), and p1751 (Vazquez de Aldana et al., 1995
) were kindly provided by A. G. Hinnebusch and T. E. Dever, and plasmid p299 (Wek et al., 1995
) was kindly provided by R. C. Wek. These plasmids have been described previously.
|
Plasmid pL2461 contains a 14.4-kb fragment of yeast genomic DNA from chromosome XI that includes ZZZ3. This fragment is inserted in the BamHI site of YCp50 (Rose et al., 1987
). Oligonucleotides 073 and 074 (Table 3), which hybridize to plasmid sequences flanking the insert, were used to sequence into the insert from both ends. DNA sequencing was performed in the Molecular Genetics Core Facility of the M. S. Hershey College of Medicine using an ABI 377 DNA Sequencer.
|
To localize sequences encoding ZZZ3, deletion derivatives of pL2461 were constructed by digestion with convenient restriction enzymes. The restricted DNA was religated to produce plasmids with various deletions. Plasmid pL2461 was digested at the unique AflII site within GCN3 and treated with the Klenow fragment to make the DNA blunt-ended, and a NotI linker was inserted. The resulting plasmid, pL2655, was digested with NotI, and a 2.0-kb fragment containing the LEU2 gene on a NotI fragment was inserted to produce pL2696.
Gene Deletions
The entire protein-coding sequence of GCN1, GCN2, or GCN3 was deleted from RLK88-3C and replaced with loxP-kanMX-loxP from pUG6 (Guldener et al., 1996
) by using appropriate PCR-generated gene disruption cassettes. Oligonucleotides (Table 3) used to generate these cassettes were as follows: GCN1, 0401 and 0402; GCN2, 0403 and 0404; and GCN3, 01 and 02. To delete GCN20 in wild-type and gcn1
strains, RLK88-3C and P1835 were transformed with the
7-kb EcoRI-XbaI fragment of p1751 (Vazquez de Aldana et al., 1995
) and Ura+ transformants were isolated. Plasmid p1751 contains a derivative of GCN20 in which the amino-terminal half of the gene has been replaced with URA3 flanked by direct repeats of hisG (Alani et al., 1987
), destroying the complementing activity of the gene (Vazquez de Aldana et al., 1995
). Correct deletion of GCN1, GCN2, GCN3, or GCN20 was verified by PCR and by increased sensitivity of transformants to sulfometuron methyl (Wek et al., 1995
).
To delete the chromosomal copy of the essential SUI2 gene, RLK88-3C was first transformed with a URA3-marked pRS316 vector (Sikorski and Hieter, 1989
) containing wild-type SUI2 (Table 2: p919; YCpSUI2 [URA3]). The chromosomal copy of SUI2 was deleted from this transformant using a PCR-generated gene-disruption cassette created with oligonucleotides 0433 and 0434 (Table 3). Transformants containing a correct deletion of the chromosomal SUI2 gene were verified by PCR. This strain was transformed with LEU2-marked plasmids encoding wild-type (p1097; YCpSUI2 [LEU2]) or mutant versions of SUI2 (p1098; YCpSUI2-S51A [LEU2] or p1350; YCpSUI2-L84F [LEU2]). Transformants were replica plated to SC-leu medium containing 5-fluoro-orotic acid (5-FOA) to select cells that lost YCpSUI2 [URA3].
Drug Exposure and Western Blot Analysis
Isoflurane (Abbott Laboratories, North Chicago, IL) and halothane without thymol as a preservative (kindly provided by Halocarbon, River Edge, NJ) were used for these studies. Isoflurane exposure of yeast grown on solid media was performed as described previously (Keil et al., 1996
; Wolfe et al., 1999
). To assay effects of isoflurane, halothane, or 3-aminotriazole (3-AT) exposure in liquid culture, appropriate strains were grown to an OD600 between 0.1 and 0.4 in liquid SC or SC-his medium (Palmer et al., 2002
). For anesthetic exposure, 50- or 100-ml aliquots of culture were injected into 250-ml evacuated bottles (Baxter Healthcare, Deerfield, IL) containing the desired concentration of volatilized anesthetic. Air was admitted into the bottles to achieve 1 atmosphere of pressure. For 3-AT exposure, cell aliquots were supplemented with 3-AT to a final concentration of 100 mM. After various lengths of drug exposure, cells were chilled on ice for 10 min in the presence of 10 mM NaN3 and 10 mM NaF and then harvested by centrifugation.
To prepare cell extracts for Western blot analysis, harvested cells were resuspended in extraction buffer (8 M urea, 5% SDS, 40 mM Tris-HCl, pH 6.8, 0.1 mM EDTA, and 100 mM
-mercaptoethanol) containing protease inhibitors (0.6 µg/ml leupeptin, 0.02 µg/ml pepstatin, 0.05 µg/ml phenylmethylsulfonyl fluoride, and 0.2 µg/ml E-64), incubated at 70°C for 10 min, and then lysed by vigorous vortexing with glass beads (Sigma, St. Louis, MO; 425600 µm). Unbroken cells and debris were removed by centrifugation. Protein concentrations of the extracts were determined by Peterson's modification of the Lowry assay (Peterson, 1977
). Aliquots containing 10 µg of total protein were mixed with SDS-containing sample buffer, denatured at 100°C for 5 min, and separated by SDS-PAGE on a 12% polyacrylamide gel. Separated proteins were electroblotted onto a nitrocellulose membrane using a semidry transfer apparatus (Bio-Rad, Richmond, CA). Membranes were incubated with polyclonal rabbit antibodies that recognize total eIF2
(kindly provided by R. Wek) or eIF2
phosphorylated at serine-51 (Biosource International, Camarillo, CA), followed by incubation with horseradish peroxidase-conjugated goat anti-rabbit secondary antibodies (Pierce, Rockford, IL). For signal detection, the Supersignal West Pico or Femto Chemiluminescent Substrate Kit (Pierce) was used. Relative levels of phosphorylated eIF2
were quantified using the GeneGnome Chemiluminescence Documentation and Analysis System with GeneTools software (Syngene, Frederick, MD).
Polysome Analysis
Cultures of appropriate strains were inoculated into bottles with or without volatilized isoflurane as described above and incubated for various lengths of time. Cycloheximide was added to a final concentration of 100 µg/ml and the cells were poured over crushed ice to rapidly cool the cultures. Harvesting of cells and preparation of lysates were conducted as described (Gelperin et al., 2002
). Eleven milliliters of 1050% sucrose gradients were prepared by alternatively adding and freezing (in liquid nitrogen) 2.2-ml aliquots of 50, 40, 30, 20, and 10% stock sucrose solutions (M. P. Ashe, personal communication) in buffer (Gelperin et al., 2002
). Gradients were thawed overnight at 4°C. Two A260 units of lysates were layered on top and the gradients were centrifuged at 4°C in a SW41 rotor at 35,000 rpm for 160 min (Arava et al., 2003
). The gradients were fractionated on an ISCO Density Gradient Fractionator with continuous monitoring by a UV detector (254 nm) set at a sensitivity of 0.5.
Gcn4p-LacZ Enzyme Assay
To assay
-galactosidase enzyme activity, triplicate 1-ml aliquots of cells exposed for 4 h to isoflurane or 3-AT as described above were harvested by centrifugation and washed with 1 ml of Z buffer (100 mM sodium phosphate, pH 7.5, 10 mM KCl, 1 mM MgSO4). Washed cells were resuspended in 0.15 ml of Z buffer containing 40 mM
-mercaptoethanol, 2.8 M chloroform, and 0.3 mM SDS and vortexed for 15 min.
-galactosidase reactions were initiated by the addition of 0.7 ml of o-nitrophenyl-
-D-galactopyranoside (ONPG; 1 mg/ml in Z buffer containing 40 mM
-mercaptoethanol). Reactions were incubated for 3060 min at 30°C and terminated by the addition of 0.5 ml of 1 M Na2CO3. The A420 of each sample was obtained following clarification by centrifugation. All values are reported in Miller units (Guarente, 1983
).
| RESULTS |
|---|
|
|
|---|
|
The temperature sensitivity of zzz2-1 zzz3-1 double mutants provided a convenient means for cloning the ZZZ2 and ZZZ3 genes. DNA from a YCpURA3 yeast genomic library was transformed into the P491 double (zzz2-1 zzz3-1) mutant and 21 Ura+ transformants that grew at 37.5°C were isolated. Plasmid DNA was prepared from each of the temperature-resistant transformants and introduced into 1) naïve P491, 2) a zzz2-1 single-mutant strain (CJP4-1B), and 3) a zzz3-1 single-mutant strain (CJP22-1D). All 21 plasmids conferred temperature resistance to the naïve P491, but the transformants were still IsoR. One of the 21 plasmids restored isoflurane sensitivity to the zzz2-1 strain but not to the zzz3-1 strain, suggesting it contains the ZZZ2 gene (characterization of this gene and its role in anesthetic response will be described elsewhere). Ten of the plasmids restored isoflurane sensitivity to the zzz3-1 strain but not to the zzz2-1 strain, suggesting these contain the ZZZ3 gene. Ten of the plasmids failed to restore isoflurane sensitivity to either single mutant, suggesting they contain second-site suppressors of the temperature sensitivity of zzz2-1 zzz3-1 double mutants.
PstI digestion of the putative ZZZ3-containing plasmids showed all the inserts contained 2.0- and 0.8-kb PstI fragments, indicating that these inserts are overlapping subclones. Sequencing into both ends of the insert in one of these plasmids, pL2461, revealed that it contained a 14.4-kb fragment from chromosome XI containing the carboxy-terminus of YKR020W, full-length YKR021W, YKR022C, YKR023W, DBP7, RPC37, GCN3, and tRNA-arginine genes, and the amino-terminal portion of YKR027W. Deletion analysis was used to further localize the sequences in pL2461 that complement the zzz3 phenotype. Removal of the AflII-AatII fragment that removes the amino-terminal portions of both GCN3 and YKR027W abolished the complementing activity of pL2461. To determine which of these two genes was responsible for the complementing activity of pL2461, LEU2 was inserted at the unique AflII site within GCN3. This insertion abolished the complementing activity of the plasmid, indicating the complementing gene is GCN3.
ZZZ3 Is Identical to GCN3
If ZZZ3 is GCN3, the zzz3-1 mutant is expected to be hypersensitive to drugs, such as sulfometuron methyl, that induce amino acid starvation. This is indeed the case (Figure 1A, compare strains 3 and 1). The zzz2-1 mutation diminishes the sensitivity of zzz3-1 to this drug (Figure 1A, compare strains 4 and 3), an effect that remains unexplained. To determine genetically whether GCN3 is ZZZ3 or a second-site suppressor of zzz3 mutations, plasmid pL2692 containing the gcn3::LEU2 disruption was digested with PstI and transformed into RLK88-3C. Leu+ transformants were isolated, and proper insertion of the gcn3::LEU2 disruption allele on the chromosome was verified by Southern analysis. All strains containing the gcn3::LEU2 disruption were resistant to isoflurane. In addition, they were cross-resistant to the four other volatile anesthetics (halothane, methoxyflurane, sevoflurane, and enflurane) tested (unpublished data). All spores from tetrads derived from a cross between one of the disruptants, CJP128, and a zzz3-1 haploid were isoflurane resistant, indicating ZZZ3 is identical to GCN3. Cells containing a precise deletion of the protein-encoding sequence of GCN3 were also isoflurane resistant (Figure 1B, compare strains 6 and 5), indicating loss of Gcn3p function produces altered anesthetic response. Finding that deletion of GCN3 renders cells resistant to volatile anesthetics suggests the general amino acid control pathway is involved in anesthetic response.
The GCN pathway is a nutrient-sensing pathway in yeast that responds to nutrient limitation by activating transcription of a variety of genes including amino acid biosynthetic genes and some amino-acyl-tRNA synthetase genes (Natarajan et al., 2001
), leading to increased production of amino acids and charged tRNAs. This pathway is activated during starvation when eIF2 is phosphorylated on serine-51 of its
subunit, impeding a GDP/GTP exchange reaction catalyzed by eIF2B that is required to recycle eIF2 to an active (GTP-bound) form that functions in translation initiation. This leads to an overall decrease in translation, but specifically stimulates production of Gcn4p, a transcriptional activator of amino acid biosynthetic genes. Amino acid starvation also induces phosphorylation of eIF2
by an evolutionarily conserved enzyme in mammalian systems (Zhang et al., 2002
).
GCN3 encodes the nonessential
subunit of the guanine nucleotide exchange factor eIF2B. Gcn3p is required for inhibition of eIF2B activity in response to eIF2
phosphorylation but not for catalytic activity of eIF2B (Cigan et al., 1993
; Dever et al., 1993
). Deletion of GCN3 has been shown to alleviate growth inhibition associated with high levels of eIF2
phosphorylation in yeast (Dever et al., 1993
). This suggests the growth-inhibitory phenotype associated with anesthetic exposure may result from increased phosphorylation of eIF2
and that deletion of GCN3 overcomes this inhibition, allowing cells to divide in the presence of anesthetics.
Mutations Affecting eIF2
Phosphorylation Enhance Volatile Anesthetic Resistance
To further characterize the role of the GCN pathway in anesthetic response, we compared the isoflurane minimum inhibitory concentration (MIC; Keil et al., 1996
) of several gcn mutants to wild-type (the isoflurane MIC of the wild-type strain is 12%; Keil et al., 1996
). GCN2 encodes the protein kinase that phosphorylates serine-51 of eIF2
in response to amino acid starvation in yeast (Dever et al., 1992
). If increased phosphorylation of eIF2
arrests cell division during isoflurane exposure, deletion of this kinase should render cells anesthetic resistant. We find gcn2
strains are indeed more resistant to isoflurane than an isogenic wild-type strain (Figure 2, compare strains 2 and 1), providing further evidence that the general control pathway plays a critical role in anesthetic response.
|
Activation of the GCN response during amino acid starvation in yeast is proposed to require binding of uncharged tRNA to a region of Gcn2p homologous to histidyl-tRNA synthetase (Wek et al., 1989
). To examine whether uncharged tRNAs signal activation of the GCN response during anesthetic exposure, we tested the isoflurane response of the gcn2-m2 mutation that reduces binding of uncharged tRNAs (Wek et al., 1995
). Gcn2
cells containing this mutant allele on a single-copy plasmid (YCpgcn2-m2) are as resistant to isoflurane as the gcn2
strain transformed with the control YCp plasmid (unpublished data). In contrast, introduction of a YCpGCN2 plasmid into this strain restores normal sensitivity to the anesthetic. This suggests that during anesthetic exposure uncharged tRNAs activate the growth inhibitory GCN pathway and that the partial inhibition of amino acid import induced by anesthetics (Palmer et al., 2002
) produces amino acid limitation.
GCN1 and GCN20 encode subunits of a protein complex required for activation of Gcn2p kinase activity during amino acid starvation (Vazquez de Aldana et al., 1995
) and deletion of either GCN1 or GCN20 reduces phosphorylation of eIF2
(Marton et al., 1993
; Vazquez de Aldana et al., 1995
). In contrast, only Gcn1p is involved in induction of the general control response during glucose limitation (Yang et al., 2000
). The role of GCN1 and GCN20 in anesthetic response was tested. We find gcn1
strains show a level of isoflurane resistance similar to gcn2
strains (Figure 2, compare strain 3 to strains 1 and 2). Although gcn20
strains are resistant to isoflurane (Figure 2, compare strains 4 and 1), they grow less in 12% isoflurane than gcn1
or gcn2
strains (Figure 2, compare strain 4 with strains 2 and 3). Analysis of a double gcn1
gcn20
mutant showed gcn1
is epistatic to gcn20
with respect to anesthetic response (Figure 2, compare strain 5 to strains 3 and 4), suggesting these gene products participate in the same pathway (Game and Cox, 1972
, 1973
).
Finding that deletion of GCN1, GCN2, or GCN20, all of which are involved in phosphorylation of eIF2
at serine-51, renders cells resistant to isoflurane suggests a mutant eIF2
that cannot be phosphorylated at this residue should also be anesthetic resistant. The chromosomal SUI2 gene, which encodes eIF2
, was deleted and YCp plasmids expressing either wild-type eIF2
(SUI2) or a mutant eIF2
that cannot be phosphorylated on serine-51 due to mutation of this residue to alanine (SUI2-S51A) were introduced. Cells containing the SUI2-S51A mutation were resistant to isoflurane compared with cells transformed with wild-type SUI2 (Figure 2, compare strains 7 and 6). We tested whether the critical feature for growth inhibition is phosphorylation of serine-51 or the effect of this phosphorylation on GDP/GTP exchange. In the SUI2-L84F mutant, phosphorylation of serine-51 still occurred but the L84F mutation is thought to diminish the inhibitory effects of this phosphorylation on GDP/GTP exchange (Vazquez de Aldana et al., 1993
). Sui2
cells containing a single-copy plasmid encoding SUI2-L84F were more resistant to isoflurane than control SUI2 cells (unpublished data), indicating inhibition of GDP/GTP exchange is critical for anesthetic response. This suggestion is consistent with finding gcn3
mutants are isoflurane resistant because gcn3
mutants permit GDP/GTP exchange even when eIF2
is phosphorylated (Dever et al., 1993
). Taken together, these results indicate phosphorylation on serine-51 of eIF2
plays a key role in the normal anesthetic response of yeast by inhibiting the GDP/GTP exchange reaction required for reutilization of eIF2 in translation initiation.
Isoflurane Affects the Level of eIF2
Phosphorylation
Our genetic results show components of the GCN pathway involved in phosphorylation of eIF2
are important in the response of yeast cells to volatile anesthetics. To directly test whether anesthetic-induced growth inhibition is due to increased eIF2
phosphorylation and activation of the GCN pathway, we performed immunoblot analysis using a polyclonal antibody that specifically recognizes eIF2
phosphorylated on serine-51. Levels of phosphorylated eIF2
increased approximately fivefold after 120 min of isoflurane exposure (Figure 3A, compare lane 7 with lane 4). However, within the first 15 min of isoflurane exposure, levels of phosphorylated eIF2
decreased
15-fold (Figure 3A, compare lane 5 with lane 2). Because amino acid uptake and cell growth are inhibited within this 15 min (Keil et al., 1996
; Wolfe et al., 1998
; Palmer et al., 2002
), finding decreased phosphorylation of eIF2
was unexpected. Examination of extracts from cells exposed for even shorter times showed phosphorylated eIF2
decreased fivefold within the first 5 min (Figure 3B, compare lane 5 with lane 2). Thus, the response of yeast to isoflurane is very rapid. It seems unlikely that decreased phosphorylation of eIF2
is an uncharacterized mechanism for growth inhibition, because both gcn2
and SUI2-S51A mutants, which are not phosphorylated on residue 51 (unpublished data and Figure 3A, lane 11, respectively), are resistant to isoflurane (Figure 2, strains 2 and 7).
|
The initial decrease in phosphorylated eIF2
in response to isoflurane exposure contrasts with the response observed in cells exposed to the histidine biosynthetic inhibitor, 3-aminotriazole (3-AT). Exposure to 3-AT produced maximal phosphorylation of eIF2
within 15 min (Figure 3A, compare lane 8 with lane 2), indicating rapid activation of the GCN pathway. Taken together, these results demonstrate the GCN pathway is affected by volatile anesthetic exposure, but it seems unlikely this nutrient-sensing pathway is responsible for the initial, rapid growth inhibition caused by isoflurane. Instead, the GCN pathway may be involved in long-term maintenance of growth inhibition induced by this volatile agent.
GLC7 Does not Play a Major Role in Isoflurane-induced Dephosphorylation of eIF2
Activation of a phosphatase is one potential explanation for the rapid decrease in eIF2
phosphorylation elicited by isoflurane exposure. The type 1 protein phosphatase Glc7p has previously been implicated in modulation of eIF2
dephosphorylation in yeast. A truncation mutation of this essential gene, encoded by glc7
209312, exerts a dominant negative phenotype when overexpressed, leading to reduced Glc7p phosphatase activity and increased phosphorylation of eIF2
(Wek et al., 1992
). To determine whether Glc7p plays a role in the phosphatase activity associated with isoflurane exposure, the level of phosphorylated eIF2
during incubation with isoflurane was compared in a strain overexpressing the truncated GLC7 allele (YEpglc7
209-312) and a strain containing the vector control (YEp). As expected, in the absence of isoflurane the strain overexpressing glc7
209-312 exhibited higher basal levels of phosphorylated eIF2
than the strain containing the vector control (Figure 4A, compare lanes 811 with lanes 14). During the first 15 min of isoflurane exposure, phosphorylation of eIF2
still dramatically decreased in cells overexpressing the GLC7 truncation (Figure 4A, compare lane 12 with lane 9). Overexpression of this mutant form also did not alter the isoflurane MIC of RLK88-3C (Figure 4B, compare strains 2 and 1). These negative results must be interpreted cautiously, but they do not indicate that the phosphatase encoded by GLC7 plays a major role in the dephosphorylation of eIF2
induced by isoflurane exposure.
|

induced by isoflurane is not a general feature of volatile anesthetic exposure. Exposure to the volatile anesthetic halothane does not reduce eIF2
phosphorylation after a brief exposure (Figure 3C, compare lane 5 with lane 2). Rather, the level of phosphorylation is relatively stable after 15 min and then increases upon longer exposure (Figure 3C, lanes 57). Similar results were observed when wild-type cells were exposed to the volatile anesthetic methoxyflurane (unpublished data). These results suggest that although eIF2
phosphorylation increases after long-term exposure to volatile anesthetics, the initial response of cells to different anesthetics varies.
Expression of GCN4 Is Induced by Isoflurane Exposure
Gcn4p is a transcriptional activator of a wide range of genes, including many involved in amino acid biosynthesis. Regulation of GCN4 translation is mediated by four short upstream open reading frames (uORFs) located in the 5' leader of GCN4 mRNA (Mueller and Hinnebusch, 1986
). When amino acids are plentiful, the uORFs repress translation of GCN4 mRNA (Hinnebusch, 1984
; Abastado et al., 1991
). A starvation-induced increase in phosphorylated eIF2
alleviates this repression in yeast, leading to elevated levels of Gcn4p and stimulation of transcription of a wide range of genes including ones encoding amino acid biosynthetic enzymes (Jia et al., 2000
; Natarajan et al., 2001
).
To determine whether isoflurane stimulates GCN4 expression in yeast, we measured
-galactosidase enzyme activity in cells harboring a plasmid containing a GCN4-lacZ fusion with intact uORFs (plasmid p180; Hinnebusch, 1985
). As a control, amino acid starvation induced with 3-AT, which is known to activate GCN4 expression (Mueller and Hinnebusch, 1986
; Yang et al., 2000
), was examined. Expression of GCN4-lacZ increased approximately threefold after long-term isoflurane exposure (Table 4), consistent with our observations that anesthetics induce eIF2
phosphorylation. This is similar to the approximate fivefold increase observed when this strain is treated with 3-AT (Table 4).
|
To determine whether the isoflurane-induced increase in GCN4-lacZ expression is regulated by translational or transcriptional control, we measured
-galactosidase activity in cells with a plasmid containing a GCN4-lacZ fusion with mutations in the four uORFs (plasmid p227; Williams et al., 1989
). These mutations destroy the ability of the uORFs to regulate translation of the GCN4-lacZ mRNA, and therefore, increased Gcn4-LacZp activity is attributable to transcriptional control (Mueller and Hinnebusch, 1986
; Williams et al., 1989
; Yang et al., 2000
). With both isoflurane and 3-AT, GCN4-lacZ expression increased only 1.3-fold (Table 4). These results suggest isoflurane induces GCN4 expression at the translational level as is expected if the cells are starving for amino acids. Induction of Gcn4p synthesis is not required for normal anesthetic response, as deletion of GCN4 does not alter the isoflurane MIC of RLK88-3C (Figure 5A, compare strains 2 and 1). As expected, the gcn4
mutant is hypersensitive to sulfometuron methyl (Figure 5B, compare strains 2 and 1).
|
Isoflurane Induces Two Separate Pathways That Arrest Translation Initiation
The elevated level of phosphorylated eIF2
observed after 120 min of isoflurane exposure indicates translation initiation should be inhibited after this extended exposure. To examine this prediction, polysome profiles were generated following various lengths of incubation in the presence or absence of isoflurane. In the wild-type strain, RLK88-3C, the level of monosomes was dramatically increased after 120 min of drug exposure and the level of polysomes was reduced (Figure 6A). The accumulation of monosomes indicated translation initiation was inhibited, consistent with the elevated level of phosphorylated eIF2
observed at this time (Figure 3A, compare lane 7 with lane 4).
|
was dramatically decreased at that time (Figure 3A, compare lane 5 with lane 2). This indicates that inhibition during early times of exposure is independent of the phosphorylation status of eIF2
. In agreement with this prediction, the rapid inhibition of translation initiation was GCN2 independent, as shown by the dramatic increase in monosomes in a gcn2
mutant after 15 min of isoflurane exposure (Figure 6B). However, maintenance of this inhibition was GCN2 dependent as evidenced by the recovery of translation initiation in the gcn2
strain during extended isoflurane incubation (60120 min; Figure 6B).
Increased Phosphorylation of eIF2
and Inhibition of Translation Do Not Occur in a Prototrophic Strain
Strains such as RLK88-3C that are auxotrophic for leucine and tryptophan are much more sensitive to isoflurane than strains prototrophic for these amino acids (Palmer et al., 2002
) or strains such as P1480, a complete prototroph derived from RLK88-3C (Figure 7, compare strain 2 with strain 1). The effect of exposure to 12% isoflurane on eIF2
phosphorylation and translation initiation was tested in P1480. Hyperphosphorylation of eIF2
did not occur in the prototroph even after 120 min of exposure to the anesthetic (Figure 3D, compare lanes 7 and 4). However, phosphorylation of eIF2
decreased approximately twofold within the first 15 min of exposure and did not recover even during extended exposure (Figure 3D, compare lanes 57 with lanes 24). Exposure of the prototroph to higher concentrations of isoflurane led to an even greater decrease in the level of phosphorylated eIF2
after both short and long periods of exposure (unpublished data). Thus, the effects of isoflurane on eIF2
phosphorylation involved at least two separate events: 1) a rapid decrease in the level of phosphorylation induced in both auxotrophic and prototrophic strains, and 2) hyperphosphorylation after extended isoflurane exposure that occurred in the RLK88-3C auxotroph but not in a prototroph derived from this strain.
|
hyperphosphorylation and the lack of effect on translation initiation, deletion of GCN2 in this prototroph did not affect the anesthetic response of the prototroph (Figure 7, compare strain 3 with strain 2). | DISCUSSION |
|---|
|
|
|---|
hyperphosphorylation would occur quickly, leading to inhibition of translation initiation. Instead, drug exposure produced a rapid decrease in phosphorylated eIF2
. Decreased phosphorylation of eIF2
during isoflurane exposure is not limited to this strain background because it also occurs in the parent strain used in the Saccharomyces Genome Deletion Project (L. K. Palmer and R. L. Keil, unpublished data; Winzeler et al., 1999
phosphorylation. This appears to be nutrient sensitive, as inhibition of translation does not occur during this time in a prototrophic strain. These results indicate activation of a GCN-independent nutrient-sensing pathway is responsible for the initial inhibition of translation initiation and cell division by isoflurane (Figure 8A).
|
phosphorylation-independent alteration of eIF2B activity that plays a role in reduction of translation initiation by fusel alcohols (Ashe et al., 2001
Hyperphosphorylation of eIF2
after extended anesthetic exposure (60120 min) is required to sustain inhibition of translation initiation. Combined with the anesthetic-resistance phenotype of gcn1, gcn2, gcn3, and gcn20 mutants, these results indicate long-term maintenance of cell division arrest is GCN dependent (Figure 8A).
GCN Pathway and Anesthetic Response
Although eIF2
hyperphosphorylation is induced by either anesthetic or 3-AT exposure, there are key differences in the response of yeast to these drugs. First, deletion of GCN1, GCN2, GCN3, or GCN20 renders yeast sensitive to 3-AT (Hannig et al., 1990
; Dever et al., 1992
, 1993
; Wek et al., 1995
) but resistant to anesthetics. This is reminiscent of increased salt tolerance observed in gcn1, gcn2, or gcn3 mutants (Goossens et al., 2001
). Second, although 3-AT rapidly induces maximal eIF2
phosphorylation, anesthetics induce a much slower increase. This longer time frame occurs whether an anesthetic initially produces dephosphorylation of eIF2
(isoflurane) or not (halothane and methoxyflurane). Finally, although expression of GCN4 is induced by both drugs (Mueller and Hinnebusch, 1986
; Yang et al., 2000
; and these studies), GCN4 does not play a major role in anesthetic response of the wild-type strain because deletion of this gene does not alter the isoflurane MIC. This contrasts with 3-AT exposure, where deletion of GCN4 produces increased sensitivity (Wolfner et al., 1975
).
These differences can be attributed to the two outcomes of activation of the GCN pathway in yeast: increased transcription of biosynthetic genes and overall inhibition of translation initiation. For 3-AT, which inhibits histidine biosynthesis in cells prototrophic for histidine, the former outcome is critical, whereas for anesthetics, which affect amino acid availability from medium for auxotrophic cells (Palmer et al., 2002
), the latter appears more important. For example, in Gcn+ His+ cells, 3-AT inhibits histidine biosynthesis, leading to increased phosphorylation of eIF2
and thus, inhibition of the GDP/GTP exchange reaction required for efficient translation initiation (Dever et al., 1992
). This increases Gcn4p production, and ultimately increases transcription of amino acid biosynthetic genes (Jia et al., 2000
; Natarajan et al., 2001
). Increased transcription of histidine biosynthetic genes provides these cells a means to grow in the presence of 3-AT because the cells can synthesize histidine. In Gcn- His+ cells (e.g., gcn1, gcn2, gcn3, or gcn20), expression of GCN4 remains repressed during 3-AT exposure because of continued efficient GDP/GTP exchange. As a consequence, the cells cannot increase transcription of histidine biosynthetic genes. Thus, these mutants are hypersensitive to 3-AT.
In contrast, isoflurane-induced GCN4 expression in Gcn+ Leu- Trp- cells does not provide cells with a compensatory mechanism to grow during anesthetic exposure. Because these cells contain auxotrophic mutations, they cannot synthesize leucine or tryptophan regardless of transcription levels. Instead, availability of these nutrients from medium is critical. In most Gcn- Leu- Trp- cells (e.g., gcn1, gcn2, gcn3, or gcn20 strains but not gcn4 strains), GDP/GTP exchange functions efficiently, allowing normal levels of translation and cell growth in the presence of isoflurane. Gcn4 mutants are an exception because Gcn4p functions downstream of the GDP/GTP exchange reaction. Therefore, as in Gcn+ cells, GDP/GTP exchange is inhibited. Thus, for 3-AT, increased transcription of biosynthetic genes is critical, although for anesthetics, repression of global protein synthesis appears key.
How can mutants such as gcn1 be resistant to anesthetics if these drugs inhibit amino acid import? A potential explanation is that import is only partially inhibited. This is consistent with our finding that after 30 min of isoflurane exposure, tryptophan import is only inhibited 60% (Palmer et al., 2002
). Presumably, this partial inhibition is sufficient to activate phosphorylation of eIF2
and inhibit translation in a Gcn+ strain, but is not sufficient to actually starve mutants that cannot phosphorylate eIF2
. Thus, it appears the GCN pathway can be triggered before circumstances become extremely dire, as would be expected for a protective response pathway.
Anesthetic-induced Inhibition of Protein Synthesis in Mammalian Cells
Numerous studies in mammalian systems show protein synthesis decreases during anesthetic exposure (e.g., Hammer and Rannels, 1981
; Wartell et al., 1981
; Rannels et al., 1982
, 1983
; Flaim et al., 1983
). Inhibition is rapid, dose dependent, and reversible and does not result in extensive cell damage or death. Mechanisms mediating anesthetic-induced inhibition of translation in mammals are not defined. Given the extensive parallels between the response of yeast and mammalian cells to anesthetics, our results suggest these drugs may inhibit protein synthesis in mammals in part through the evolutionarily conserved GCN pathway. Preliminary studies indicate eIF2
phosphorylation is induced by anesthetic exposure in mammalian tissues (L. K. Palmer, S. L. Rannels, S. R. Kimball, L. S. Jefferson, and R. L. Keil, unpublished data). Additional characterization of the mechanism is in progress.
Anesthetic Mechanisms of Action: Nutrient (Neurotransmitter)-sensing Signaling Pathways?
The importance of elucidating mechanisms of anesthetic action often seems minimized by interest directed at identification of sites of action. In reality, understanding mechanisms that induce anesthesia or associated side effects may be more important. The pathways involved should provide targets for drug intervention to enhance desirable drug effects or minimize undesirable ones. Our analysis suggests anesthetics inhibit yeast cell division by decreasing availability of particular amino acids (Palmer et al., 2002
). In part, induction of the GCN pathway leads to suspension of normal cellular activities and maintenance of growth arrest. Do our findings with yeast provide insight regarding anesthetic mechanisms in mammals? Possibly anesthesia and/or side effects of anesthetics result from induction of the GCN and other nutrient-sensing pathways in response to anesthetic-induced nutrient deprivation. Alternatively, there may be uncharacterized sensing-response pathways specifically triggered by neurotransmitter deprivation. Such pathways may be activated in neuronal cells deprived of basal levels of neurotransmitter input, causing cells to suspend normal activity and enter a special state resulting in anesthesia. Given that 1) amino acids (e.g., glutamate, aspartate, and glycine) and their derivatives (e.g., GABA, serotonin, catecholamines, histamine, and nitric oxide) are neurotransmitters; 2) amino acids (e.g., leucine) play a key role in neurotransmitter metabolism (Yudkoff et al., 1994
, 1997
); and 3) volatile anesthetics affect transport of amino acids (Shimada et al., 1995
) and neurotransmitters (Martin et al., 1990
; el-Maghrabi and Eckenhoff, 1993
; Larsen and Langmoen, 1998
; Sugimura et al., 2001
) in mammals, these are reasonable possibilities. Transport of amino acids and their derivatives plays critical roles in transmitter synthesis and nerve transmission (Figure 8B). These include 1) transport of amino acids into neurons where they may act as neurotransmitters or be metabolized to produce neurotransmitters; 2) transport of neurotransmitters into synaptic vesicles; and 3) reuptake, which entails transport of released transmitters from synapses into neural or glial cells and plays a major role in neurotransmitter inactivation. Effects of anesthetics on these transport mechanisms could play critical roles in anesthesia by inducing deprivation-sensing pathways including GCN. Similar effects in nonneuronal cells may be responsible for anesthetic side effects.
| ACKNOWLEDGMENTS |
|---|
|
|
|---|
| Footnotes |
|---|
* Present address: Division of Mathematics and Natural Sciences, The Pennsylvania State University, Altoona Campus, Altoona, PA 16601 ![]()
Present address: Department of Molecular Genetics and Biochemistry, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261. ![]()
Address correspondence to: Ralph L. Keil (rkeil{at}psu.edu).
| REFERENCES |
|---|
|
|
|---|
Alani, E., Cao, L., and Kleckner, N. ((1987). ). A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains. Genetics 116, , 541-545.
Arava, Y., Wang, Y., Storey, J. D., Liu, C. L., Brown, P. O., and Herschlag, D. ((2003). ). Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 100, , 3889-3894.
Ashe, M. P., Slaven, J. W., De Long, S. K., Ibrahimo, S., and Sachs, A. B. ((2001). ). A novel eIF2B-dependent mechanism of translational control in yeast as a response to fusel alcohols. EMBO J. 20, , 6464-6474.[CrossRef][Medline]
Batai, I., Kerenyi, M., and Tekeres, M. ((1999). ). The impact of drugs used in anaesthesia on bacteria. Eur. J. Anaesth. 16, , 425-440.[CrossRef][Medline]
Cigan, A. M., Bushman, J. L., Boal, T. R., and Hinnebusch, A. G. ((1993). ). A protein complex of translational regulators of GCN4 mRNA is the guanine nucleotide-exchange factor for translation initiation factor 2 in yeast. Proc. Natl. Acad. Sci. USA 90, , 5350-5354.
Deloche, O., de la Cruz, J., Kressler, D., Doere, M., and Linder, P. ((2004). ). A membrane transport defect leads to a rapid attenuation of translation initiation in Saccharomyces cerevisiae. Mol. Cell 13, , 357-366.[CrossRef][Medline]