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Vol. 18, Issue 12, 4741-4749, December 2007
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State Key Laboratory of Biomembrane and Membrane Biotechnology, Department of Biological Sciences and Biotechnology, Tsinghua University, Beijing 100084, China
Submitted May 10, 2007;
Revised August 31, 2007;
Accepted September 6, 2007
Monitoring Editor: Donald Newmeyer
| ABSTRACT |
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| INTRODUCTION |
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100 million are formed every minute. Iron deficiency leads to anemia, and in serious cases, death. Copper is a component of enzymes such as superoxide dismutase (SOD)1, catalase, and dopamine hydroxylase, and it is a critical component in mitochondrial electron transport chain (ETC). Menkes syndrome, resulting from a copper transporter defect (Chelly et al., 1993
Aside from these beneficial effects, excessive amounts of metal ions can also be toxic to the cell. Accumulation of metal ions has been reported in all species, and it inevitably results in toxicosis. In humans, Cu toxicosis can be the result of inherited abnormalities (such as in Wilson's disease and likely some cases of Indian childhood cirrhosis) or environmental poisoning, and it often leads to hepatic cirrhosis and degeneration of the basal ganglia. Exposure to high levels of manganese, an element found in several critical enzymes within diverse locations in the cell, including the Golgi, mitochondria and cytoplasm, can lead to manganism, a Parkinson's disease-like neurological disorder with characteristic syndromes of mental difficulties and impairments in motor skills (Pal et al., 1999
; Kaiser, 2003
). Metal ion accumulation is even implicated in the pathogenesis of neuronal injury in Alzheimer's disease, prion-mediated encephalopathies, familial amyotrophic lateral sclerosis, and other age-related diseases (Waggoner et al., 1999
). To balance out the beneficial and detrimental effects of metal ions, cells have evolved intricate and complicated systems to deal with metal deficiency and excess. Although great strides have been made toward understanding metal homeostasis in the past decade, very little is known regarding the factors that contribute to the metal toxicity.
Apoptosis is a form of programmed cell death (PCD), and it plays a central role in development and homeostasis of metazoan organisms. Apoptosis allows rapid removal of potentially threatening or undesired cells (Vaux and Korsmeyer, 1999
; Beers and McDowell, 2001
). Recently apoptosis is also discovered in unicellular organisms such as bacteria and yeast. In Saccharomyces cerevisiae, apoptosis-like cell death was first described for a temperature-sensitive cdc48 mutant (Madeo et al., 1997
). Since then, many intra- or extracellular factors, such as the
mating-type pheromone (Severin and Hyman, 2002
), low doses of hydrogen peroxide (Madeo et al., 1999
), acetic acid (Ludovico et al., 2001
), UV radiation (Del Carratore et al., 2002
), salt (Huh et al., 2002
), aspirin (Balzan et al., 2004
), low sugar concentrations in the absence of additional nutrients (Granot et al., 2003
), hyperosmotic stress (Silva et al., 2005
), and viral killer toxins (Reiter et al., 2005
) have found to be able to induce yeast apoptosis. In addition, physiological scenarios of yeast apoptosis have been described during aging process (Laun et al., 2001
; Herker et al., 2004
). Just as in mammalian cells (Kerr et al., 1972
; Martin et al., 1995
; Clifford et al., 1996
), yeast apoptosis can be detected with typical markers, such as DNA fragmentation, phosphatidylserine externalization, and chromatin condensation (Madeo et al., 1997
). Worth noting is that although PCD and apoptosis may not be synonymous in the mammalian field, it is standard in yeast studies that they are referred to as identical terms.
Many similarities occur between apoptotic programs in yeast and mammalian cells. A metacaspase analogous to mammalian caspases called yeast caspase-1 (Yca1p) was identified in S. cerevisiae to be required for H2O2 or aging-induced apoptosis (Madeo et al., 2002
). An orthologue of key regulator such as the HtrA2-like protein (Fahrenkrog et al., 2004
) has been observed in yeast. In addition, an apoptosis-inducing factor (AIF) orthologue, Aif1p, was identified in yeast that displays sequence similarity to AIF and AIF-homologous mitochondrion-associated inducer of death (AMID) and that regulates apoptosis in a similar way to that of AIF in mammalian cells (Wu et al., 2002
; Wissing et al., 2004
). We previously found that yeast AMID homologue Ndi1p displays respiration-restricted apoptotic activity (Li et al., 2006
). Fannjiang et al. (2004)
also reported that Dnm1p, the S. cerevisiae homologue of the human mitochondrial fission protein Drp1p was involved in yeast apoptosis. Similar to that in mammalian apoptosis, reactive oxygen species (ROS) play a central role in most yeast apoptotic processes. In addition, evidence has been provided for cytochrome c-associated mitochondrial involvement in yeast apoptosis (Ludovico et al., 2002
; Silva et al., 2005
).
Genetic tractability, combined with the remarkable conservation of gene function throughout evolution, makes yeast an ideal model to study how cells deal with metal excess and execute cell death programs. To date, there are no reports of killing mechanisms of nutritional metals in yeast. Here, we report that Cu and Mn, two representative trace nutritional metal elements, are able to trigger S. cerevisiae into an apoptosis-like PCD process, and we identified different pathways in which they induce cell death.
| MATERIALS AND METHODS |
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4,6-Diamidino-2-phenylindole (DAPI) Staining and Microscopy
The standard protocol for DAPI nuclei staining was used, as described by Streiblova (1988)
. Cells were collected, resuspended in 70% (vol/vol) ethanol for brief fixation and permeabilization, and then stained with DAPI solution. Cell images were recorded at room temperature from a fluorescence microscope (model ECLIPSE 80i; Nikon, Tokyo, Japan) with a digital camera (model DXM1200F; Nikon). A 100x objective lens was used. Images were processed using Adobe Photoshop7.0 software (Adobe Systems, Mountain View, CA).
Terminal Deoxynucleotidyl Transferase-mediated dUTP Nick End Labeling (TUNEL) Staining
DNA strand breaks were monitored by TUNEL with the In Situ Cell Death Detection kit, Fluorescein (Roche Applied Science, Mannheim, Germany). TUNEL labels free 3'-OH termini with fluorescein isothiocyanate (FITC)-labeled deoxyuridine triphosphate (dUTP), which can be detected under epifluorescence microscopy. Yeast cells were fixed with 3.7% (vol/vol) formaldehyde as described by Madeo et al. (1999)
, and the cell wall was digested with 15 U/ml lyticase (Sigma-Aldrich, St. Louis, MO) for 2 h at 28°C. The cells were then applied to polylysine-coated slides. The cell slides were rinsed with phosphate-buffered saline (PBS), incubated in permeabilization solution (0.1%, vol/vol, Triton X-100 and 0.1%, wt/vol, sodium citrate) for 2 min on ice, rinsed twice with PBS, and incubated with 10 µl of TUNEL reaction mixture (200 U ml–1 terminal deoxynucleotidyl transferase, 10 mM FITC-labeled dUTP, 25 mM Tris-HCl, 200 mM sodium cacodylate, and 5 mM cobalt chloride) for 60 min at 37°C. Finally, the slides were rinsed three times with PBS, and a coverslip was mounted. Microscope and image acquisitions were performed as described above for DAPI staining, except that a 40x objective lens was used.
ROS Detection
For detection of intracellular ROS, cells were incubated with dihydrorhodamine 123 (DHR123) (Sigma-Aldrich) for 2 h or dihydroethidium (DE) (Sigma-Aldrich) for 10 min, normally after metal treatment unless specified otherwise, and the cells were examined under fluorescent microscopy as described for TUNEL assay.
| RESULTS |
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Cu- or Mn-induced Yeast Death Displays Characteristic Markers of Apoptosis
To assess whether the cell death induced by Cu and Mn ion is apoptotic, apoptotic markers were investigated. Previous study has demonstrated that yeast apoptosis is associated with the cleavage of chromosomal DNA (Madeo et al., 1997
). Apoptotic DNA cleavage produces free 3'-OH termini, which can be detected by labeling with modified nucleotides (e.g., FITC-dUTP) catalyzed by terminal deoxynucleotidyl transferase (TUNEL assay). The TUNEL method is a fast and sensitive way to visualize the amount of DNA fragmentation in individual cells, and the result can be observed under fluorescent microscopy. Wild-type yeast exposed to 2 mM or 4 mM Cu2+ showed almost no TUNEL-positive cells, whereas after 12-h exposure to 6 mM Cu2+ and 8 mM Mn2+, yeast cells had an intensive fluorescent nuclear staining in the TUNEL assay. We observed 47% and 55% TUNEL-positive cells, respectively, after Cu2+ and Mn2+ treatment (Figure 2, A and C), indicating massive DNA fragmentation, whereas cells incubated in the absence of added Cu2+ and Mn2+ were unstained. Interestingly, treatment with even higher concentrations of Cu2+ resulted in death of most cells in necrosis, because DNA fragmentation could not be detected. As shown in Figure 3B, wild-type cells treated with 10 mM Cu2+ displayed negative TUNEL staining. This phenomenon also was noted for Mn2+. Although 8 mM Mn2+ was toxic to yeast and induced widespread apoptosis, at higher concentration (such as 12 mM) yeast cells died via necrosis pathway, because almost no DNA fragmentation was detected by TUNEL staining (Figure 2C).
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Mitochondrial ETC Is Intimately Involved in Both Cu- and Mn-induced Apoptosis
Mitochondria are essential for most types of apoptosis in animals (Newmeyer et al., 1994
; Skulachev, 1999
). The role of mitochondrial function was also implicated in yeast apoptosis induced by various factors, such as pheromone, hyperosmotic stress, and acetic acid (Ludovico et al., 2002
; Pozniakovsky et al., 2005
; Silva et al., 2005
). These findings prompted us to assess the role of mitochondrial functions in programmed cell death process induced by Cu2+. Petite yeast strain, which is defective in mitochondrial DNA and respiration, was more resistant to cell death induced by Cu2+ compared with the wild-type strain (Figure 3A). In addition, the occurrence of apoptotic markers was strongly reduced (Figure 3B), clearly demonstrating the involvement of mitochondria in Cu-induced apoptosis. Mitochondria also seem to play a role in Mn-induced apoptosis, as petite strain survived better and had much less manifestation of apoptotic markers than wild-type strain when exposed to Mn2+ (Figure 3, C and D).
To test the role of ETC in Cu-induced apoptosis, several single mutants affecting ETC components in NDI1, complex III, and complex IV were analyzed. Most, but not all, of them had better survival rates under Cu stress. Results for yeast mutants ndi1
, qcr7
and cox12
, which are defective in NDI1, complex III, and IV respectively, were shown in Figure 3A. Although survival rates of these ETC mutants increased more than twofold after 12 h of incubation with Cu2+, worth noting is that among the mutants we analyzed, qcr10
, which is defective in complex III, had comparable rate of growth to that of wild type. The role of the mitochondrial respiratory chain in Mn-induced apoptosis was also examined. After incubation with Mn2+, many ETC mutants exhibited significant better survival than that of wild type (Figure 3C), suggesting that mitochondrial respiratory chain is involved in both Cu- and Mn-induced cell death.
Different Effects of Cu and Mn on Intracellular Reactive Oxygen Species Production
One of the key mechanisms by which cells trigger programmed cell death is the production of ROS. ROS has been shown to be both necessary and sufficient for inducing apoptosis in yeast (Madeo et al., 1999
). DHR123 or DE were used as probes for the detection of this apoptotic marker. DHR123 can be oxidized to the fluorescent chromophore rhodamine 123 by intracellular ROS. In the presence of the superoxide anion, DE is oxidized to ethidium that intercalates within nucleic acids, staining the cell with a bright red fluorescence.
Cu2+ exposure of yeast cells led to an increase in ROS generation, which was dose dependent (Figure 4A). Exposure of wild-type yeast cells to 4 mM Cu exhibited little ROS accumulation, whereas at 6 mM a strong fluorescence signal was observed in
60% of treated cells. As a control, cells incubated in the absence of Cu2+ additionally displayed hardly any dihydrorhodamine staining. In contrast, ROS production was virtually not detected in yeast cells after Mn2+ treatment (Figure 4C), and this is true throughout the treatment, including 10 min, 40 min, 2 h, 4 h, 8 h, and 12 h of incubation. The same result was obtained using probe dihydroethidium (Figure 4D). To exclude the possibility of transient burst of ROS production, we additionally treated cells with Mn2+ in the presence of ROS-sensing dye (see Materials and Methods), and even under this scenario no significant ROS signal was detected (data not shown).
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Different Roles of Yeast Metacaspase Yca1p in Cu- and Mn-induced Apoptosis
Yeast YCA1 gene codes for a metacaspase structurally and functionally analogous to mammalian caspases (Madeo et al., 2002
). Yca1p has been previously shown to mediate apoptosis-like cell death in aged yeast cells and in yeasts treated with H2O2 or acetic acid (Madeo et al., 2002
). Cytochrome c has been suggested to be important for metacaspase activation and probably acts upstream of this protease (Silva et al., 2005
). Yeast Aif1p, a homologue of human AIF, was also reported to be involved in apoptosis in response to H2O2 or chronological aging (Wissing et al., 2004
). AIF has been suggested to control a caspase-independent pathway of apoptosis, important for neurodegeneration and normal development (Susin et al., 1999
; Cregan et al., 2002
).
To determine whether metacaspase Yca1p and cytochrome c mediate metal-induced stress, we examined cell survival in cells exposed to Cu2+ and Mn2+. yca1
mutant and its isogenic WT displayed almost the same cell survival in the presence of 6 mM Cu2+ after 12 h or at different times before that (Figure 5, A and B), indicating metacaspase Yca1p did not play an important role in Cu-induced apoptosis. In addition, cyc1
cyc7
(lacking cytochrome c) and aif1
strains did not significantly improve the viability of yeast cells when incubated with Cu2+, suggesting that none of them mediates Cu-induced apoptosis in a rather meaningful way.
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and cyc1
cyc7
strains manifested better survival than wild-type strains after Mn2+ treatment (Figure 5C). The time course of cell survival was performed in the presence of 8 mM Mn2+. yca1
mutant displayed a significantly better survival compared with the wild type (Figure 5D), indicating metacaspase Yca1p is involved in Mn-induced yeast apoptosis program. The role of AIF1 in Mn-induced apoptosis was also examined. Loss of AIF1 seemed to improve the viability of cells exposed to Mn2+. Altogether, these results demonstrated that contrasting pathways are adopted by Cu2+ and Mn2+ in inducing apoptosis.
Yeast Cyclophilin D Homologue Cpr3p Mediates Cu-induced Apoptosis
Because Cu-induced apoptosis, in contrast to that of Mn, seems to be independent of caspase, cytochrome c, or AIF pathway, we proceeded to investigate which gene(s) or pathway might mediate Cu-induced apoptosis. We performed a genetic screen to search for gene(s) that may be involved in Cu-induced cell death cascade. A yeast deletion pool was plated on Cu2+-containing plates and enriched for Cu2+-resistant clones. These clones were then individually tested for their Cu2+ resistance. Among the clones identified and characterized, most of them (8 of 11) turned out to be from a single mutant, cpr3
. CPR3 is a homologue of mammalian cyclophilin D, and it encodes for the mitochondrial peptidyl-prolyl cis-trans isomerase. It has been shown before that cyclophilin D and the mitochondrial permeability transition are required for mediating Ca2+- and oxidative damage-induced cell death (Halestrap, 2005
). As shown in Figure 6A, cpr3
displayed increased resistance to Cu-induced cell death compared with the wild-type control. Furthermore, TUNEL-positive cells could not be detected in cpr3
mutant (Figure 6B) under Cu2+ stress, indicating deletion of CPR3 may abolish apoptosis induced by Cu2+. To analyze whether Cpr3p mediates ROS generation by Cu or not, we examined the ROS production in cpr3
cells, and we found ROS production was largely intact (Figure 6C). That resistance of cpr3
cells to Cu was comparable with that of petite cells suggests necrosis was unaffected in cpr3
cells. Finally, we checked CPR3 involvement in Mn-induced apoptosis. Deletion of CPR3 was not able to promote cell survival after Mn2+ treatment (Figure 6E). This means CPR3 probably does not participate in the process of Mn-mediated apoptotic program.
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cells exposed to Cu2+. The result in Figure 6A showed por1
cells exhibited significantly reduced Cu-induced cell death, supporting the key role of mPTP played in Cu-induced apoptosis. Cyclosporine A is known to block mitochondrial permeability transition pore opening by binding to cyclophilin D in mammalian cells. However, the addition of cyclosporine A did not alleviate Cu2+ toxicity (Figure 6D). We explain this by that yeast mitochondria may not be sensitive to the action of cyclosporine A, as reported in the work by Jung et al. (1997)| DISCUSSION |
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Cu- and Mn-induced apoptosis is mitochondria dependent, as demonstrated by increased resistance toward Cu2+ or Mn2+ in mitochondria-defective strains. However, petite or ETC mutant strains are still vulnerable to the action of metal ions, albeit higher levels of metal ions are needed. We found that 10 mM Cu2+ or 12 mM Mn2+ can dramatically inhibit petite yeast. This level is consistent with what we observed for necrosis to occur. Thus, Cu and Mn kill normal yeast through apoptosis or necrosis, depending on the dosage, but in mitochondria-defective yeast strains, cells can only adopt the necrotic pathway to die.
ROS play a central role in inducing apoptotic markers and mediating cell death in yeast (Madeo et al., 1999
; Laun et al., 2001
; Ludovico et al., 2001
; Mazzoni et al., 2003
; Weinberger et al., 2003
). Transition metal Cu is one of the most potent elements catalyzing Fenton's reaction. ROS such as the superoxide anion radical (O2
) are generated by all aerobic cells as byproducts of a number of metabolic reactions or in response to various stimuli. And mitochondria ETC is though to be a major site of ROS production according to an endogenous and continuous physiological process under aerobic conditions. Much of the O2
generated by mitochondria is thought to be from electron leakage in the components of the mitochondrial electron transport chain. It is thus not surprising that ETC and ROS play important roles in Cu-induced apoptosis. Our results, however, indicate that Mn2+ induces apoptosis without significant ROS production. In the absence of ROS generation, it is somewhat difficult to understand why ETC is involved in Mn-induced apoptotic program in yeast. Previously, Ludovico et al. (2002)
found that mitochondrial respiration is essential for S. cerevisiae to undergo a programmed cell death induced by acetic acid. Functional electron transport was also reported to be required for oxygen deprivation-induced cell death by HT1080 human fibrosarcoma cells (McClintock et al., 2002
). Therefore, it is possible that Mn2+ needs a functional ETC to execute its PCD, whereas Cu2+ needs a functional ETC to generate ROS and possibly needs it to execute its PCD as well. From this perspective, ETC may play a dual role in the process of Cu-induced apoptosis.
Although overexpression of SOD2 in yeast leads to significantly increased resistance to Cu-induced cell death compared with the vector control, it is not known why ascorbate and vitamin E, two antioxidants that can protect against oxidative damage, are ineffective against the damaging effects of Cu2+. One hypothetical explanation is that vitamin E, like ascorbate, can catalyze the reduction of Cu2+ to Cu+ (Yoshida et al., 1994
; Albertini and Abuja, 1999
), and the rapid reaction of Cu+ with basal levels of H2O2 produced by mitochondria could lead to the generation of more, instead of less, reactive radicals.
YCA1 gene in S. cerevisiae encodes a metacaspase that is involved in yeast apoptosis in response to different stimuli (Madeo et al., 2002
; Herker et al., 2004
; Wadskog et al., 2004
; Wissing et al., 2004
). The present study showed that metacaspase Yca1p deficiency strain yca1
has increased cell survival compared with wild-type strain in the presence of Mn2+. Moreover, during the entire time course yca1
mutant manifested better cell survival than that of wild type. These results demonstrate that yeast metacaspase Yca1p plays an important role in Mn-induced yeast apoptosis. On the contrary, loss of metacaspase Yca1p activity did not promote cell survival in the presence of Cu2+, suggesting that yeast metacaspase Yca1p is not involved in the PCD process induced by Cu2+. Hauptmann et al. (2006)
also reported that defects in N-glycosylation-induced apoptosis is independent of metacaspase Yca1p. Both these findings indicate the existence of a metacaspase Yca1p-independent apoptotic pathway in yeast.
Our genetic screen identified Cpr3p, a yeast homologue of cyclophilin D (Dolinski et al., 1997
), to be involved in Cu-induced apoptosis. Cyclophilin D, a prolyl isomerase located within the mitochondrial matrix, together with adenine nucleotide translocator, a VDAC, consist the mPTP. Mitochondrial permeability transition is associated with mitochondrial swelling, outer membrane rupture, and the release of apoptotic mediators (Halestrap, 2005
). Previously, cyclophilin D has been implicated in both necrosis and apoptosis programs (Halestrap, 2005
; Schneider, 2005
). In our study, cpr3
mutant was resistant to 6 mM Cu-induced cell death but still vulnerable to 10 mM Cu, and it died without appearance of DNA fragmentation, exactly as petite strain behaves. Therefore our investigation indicated that Cpr3p mediates apoptosis process induced by Cu2+ in yeast. This is consistent with the observation that ROS is associated with Cu-induced apoptosis, because it has been shown that mPTP can mediate ROS apoptotic activity (Baines et al., 2005
).
Cu-induced apoptosis has been reported in mammalian epithelial breast cancer MCF7 cells (Ostrakhovitch and Cherian, 2005
) and p53 seems to mediate the ROS generation. Cu-induced apoptosis in MCF7 cells is associated with AIF release and its translocation into the nucleus. However, there is no p53 homologue in yeast, and aif1
mutant does not promote survival of yeast cells exposed to Cu2+, implying yeast cells adopt different apoptotic program under Cu2+ stress. In our study, ETC may play a role in the ROS generation of Cu-induced yeast apoptosis, and cyclophilin D homologue Cpr3p, perhaps as well as the other components of mPTP, mediates Cu-induced apoptosis. A similar kind of apoptotic program may be used by cadmium-treated mammalian cells. Shih et al. (2004)
found that heavy metal cadmium, an environmental toxin, can induce apoptosis in MRC-5 fibroblasts, and this process is independent of caspase. In that study, mitochondrial ETC and mPTP seem to be early targets of Cd, which in turn causes the mitochondrial ROS to leak out, eventually leading cells to apoptosis. Similar to our findings, Mn2+ has also been reported to induce apoptosis in mammalian cells, such as PC12 and human B cells (Schrantz et al., 1999
; Hirata, 2002
), and activation of caspase family proteases is required for the apoptotic process. Mn-induced apoptosis in HeLa cells was shown to be accompanied by production of ROS (Oubrahim et al., 2001
). Our results indicated that in addition to caspase activation, mitochondria also play a role in Mn-induced apoptosis. But we did not detect significant ROS production in yeast cells exposed to Mn2+.
Yeast has evolved sophisticated mechanisms to deal with extreme metal deficiency and excess due to its highly variable living environments in the wild. As a whole, our results demonstrated that two essential nutritional elements, Cu and Mn, induce yeast apoptosis in an extremely dosage-sensitive way via different pathways. ROS play different roles in these two processes, which are generated greatly in Cu-induced cell death but not in Mn-induced cell death. Furthermore, overexpression of SOD2 can increase Cu resistance in wild-type yeast cells. Yeast caspase and cytochrome c seem not to be involved in Cu-induced process, but they play an important role in Mn-induced process. Further evidence is provided that Cpr3p is central to the programmed cell death process induced by Cu ion in S. cerevisiae. Our finding about the different roles of mitochondrial ETC played in Cu- and Mn-induced apoptosis may provide interesting insight into the mitochondrial involvement in the process of different apoptotic programs. We hope this study would help further understanding of the death mechanisms, and the unique aspects of them, as used by the cell to deal with possible toxic effects impacted by nutritional metal ions.
| ACKNOWLEDGMENTS |
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| Footnotes |
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Address correspondence to: Bing Zhou (zhoubing{at}mail.tsinghua.edu.cn).
Abbreviations used: DHR123, dihydrorhodamine 123; ETC, electron transport chain; mPTP, mitochondrial permeability transition pore; PCD, programmed cell death; ROS, reactive oxygen species.
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