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Vol. 19, Issue 5, 1873-1882, May 2008
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IBPM Institute of Molecular Biology and Pathology, National Research Council, c/o University of Rome "La Sapienza", 00185 Rome, Italy
Submitted October 19, 2007;
Revised February 1, 2008;
Accepted February 8, 2008
Monitoring Editor: Stephen Doxsey
| ABSTRACT |
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| INTRODUCTION |
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/β, in the immediate vicinity of chromatin, thus promoting nucleation of MTs therein (reviewed by Weis, 2003
/β also contributes to spindle assembly in centrosome-driven cells (Nachury et al., 2001
Kinetochores were also reported to direct MT nucleation in mammalian cells after spindle-disrupting drugs, but this idea was subsequently questioned, based on concerns for possible artifactual effects of the drugs (Rieder, 2005
, and references therein). More recently, in vivo imaging of mitosis has shown that unattached kinetochores facing away from centrosomes can promote the formation of MTs during mitotic spindle assembly in both mammalian (Khodjakov et al., 2003
) and Drosophila cells (Maiato et al., 2004
). In both cases, chromosome arms shielded the distal kinetochore from interaction with microtubules generated at centrosomes, possibly providing time for kinetochore nucleation to occur. However, the importance of this kinetochore-driven MT nucleation for spindle assembly in centrosome-containing cells is not clearly defined, as only a few examples were recorded in the live cell studies (Khodjakov et al., 2003
; Maiato et al., 2004
). Furthermore, the molecular requirements for MT formation at kinetochore are not fully understood. Recently, Tulu et al. (2006)
observed microtubule formation at Bub1-positive sites after release from nocodazole (NOC)-induced spindle disassembly in live cell imaging experiments (Tulu et al., 2006
). Formation of MT foci in the chromatin region was severely inhibited when the activity of the Ran-dependent spindle assembly factor TPX2 was suppressed by either microinjection of excess importin β, or by direct TPX2 depletion (Tulu et al., 2006
). These results suggest that the dissociation of import complexes entrapping NLS-bearing spindle assembly factors contributes to the genesis of MT foci. However, the limited resolution of current live cell imaging methods did not allow discriminating whether the inhibition of extracentrosomal MT foci reflected the suppression of RanGTP-dependent MT nucleation specifically at kinetochores, or, rather a disruption of the overall RanGTP gradient, which is generated along the entire chromosome region by the persisting binding of RCC1 to mitotic chromatin. Furthermore, it remains to be determined what localizes extracentrosomal MT nucleation to the kinetochore area, given that the exchange factor for Ran is distributed along the entire length of the chromosome. We have readdressed these questions by assessing mitotic spindle reassembly after microtubule depolymerization by nocodazole or after cold-induced spindle disassembly in cells with impaired centrosome-nucleating activity. We now report that the localized accumulation of RanGTP at kinetochores is responsible for MT nucleation therein. The complex between RanGTP, the export receptor Crm1 and NES-bearing proteins modulates MT nucleation at kinetochores.
| MATERIALS AND METHODS |
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RNA Interference Experiments
Small interfering RNA (siRNA) oligonucleotides targeting Polo-like kinase 1 (Plk1) or firefly luciferase gene sequences (GL2) were from QIAGEN (Hilden, Germany). siRNAs were mostly used at the final concentration of 80 nM using Oligofectamine (Invitrogen, Carlsbad, CA) as transfection reagent. siRNA sequences and conditions of interference were described previously (De Luca et al., 2006
). All analyses were performed 40 h from transfection.
Immunoblotting
An equal number of cells from tsBN2 cultures grown to 85% confluence at 32°C, or shifted to 39°C during the last 4 h of culture, was pelleted by centrifugation for 10 min at 1500 rpm, and then they were washed in phosphate-buffered saline (PBS). Cells were extracted with radioimmunoprecipitation assay buffer (50 mM Tris-HCl, pH 8.0, 150 mM NaCl, 1%, NP-40, 1 mM EGTA, and 0.25% sodium deoxycholate) supplemented with 1 µg/ml leupeptin, 1 µg/ml pepstatin, 1 µg/ml aprotinin, 1 mM phenylmethylsulfonyl fluoride, 1 mM dithiothreitol, 1 mM NaVO4 and 1 mM NaF. Proteins were resolved by electrophoresis on a 10% SDS-polyacrylamide gel, and then they were transferred to a nitrocellulose membrane (Protran; Whatman Schleicher and Schuell, Keene, NH) by using a semidry blotting system (Bio-Rad, Hercules, CA) in transfer buffer (48 mM Tris, 39 mM glycine, 0037% SDS, and 20% methanol). Sixty micrograms of extract per lane was loaded. Blocking and antibody incubations were in 5% low-fat dry milk in Tris-buffered saline (10 mM Tris-HCl, pH 8.0, and 150 mM NaCl) containing 0.1% Tween 20. Membranes were blocked for 30 min, primary antibodies were incubated for 1 h and secondary antibodies for 30 min at room temperature. Primary antibodies were anti-RCC1 (0.5 µg/ml; Santa Cruz Biotechnology, Santa Cruz, CA) and anti-RanBP1 (0.5 µg/ml; Santa Cruz Biotechnology). U2OS cells were lysed, resolved, and transferred under similar conditions. Forty micrograms of extract per lane was loaded. Primary antibodies were mouse anti-
-tubulin (ascite fluid, clone B-5-1-2, 1:2000; Sigma-Aldrich, St. Louis, MO) and mouse anti-Plk1 (ab 14210, 1 µg/ml; Abcam, Cambridge, United Kingdom).
Immunostaining
Cells were rinsed in PHEM buffer [60 mM piperazine-N,N'-bis(2-ethanesulfonic acid), 25 mM HEPES, pH 6.9, 10 mM EGTA, and 4 mM MgSO4], and then they were lysed for 45 s in 0.1% Triton-X in PHEM buffer (MRC-5 and U2OS) or for 5 min in 0.5% Triton-X (tsBN2). Cells were fixed for 10 min in 3.7% formaldehyde in PHEM, and then they were rinsed in PBS and postfixed in ice-cold MetOH for 5 min. After fixation, cells were washed, blocked for 30 min in 20% goat serum at room temperature, and incubated at 37°C for 1 h with primary antibodies diluted in 5% goat serum. Primary antibodies were anti-
-tubulin and anti-
-tubulin (Sigma-Aldrich) diluted 1:300 and 1:2000, respectively; CREST serum (1:50; Antibodies Incorporated, Davis, CA), anti-NuMA (1:50; Calbiochem, San Diego, CA), anti-p150Glued (1:100; BD Biosciences, San Jose, CA), anti-Plk1(14210 and 14209, ABCAM, 1:100), anti-IAK1/Aurora-A (clone 4, 1:1000; BD Biosciences, San Jose, CA) anti-
-tubulin fluorescein isothiocyanate conjugate (1:100; Sigma-Aldrich), and anti-RanGAP1 (1:200; Santa Cruz Biotechnology). Anti-Kif2a (1:1000), anti-centrin 2 (1:1125), anti-HURP (1:300), and anti-RanGTP (AR12; 1:50) were kindly provided by D. Compton (Dartmouth Medical School, Hanover, NH), J. Salisbury (Mayo Clinic Foundation, Rochester, MN), E. A. Nigg (Max Planck Institute of Biochemistry, Martinsried, Germany), H. Sillje (Max Planck Institute of Biochemistry), and I. Macara (University of Virginia School of Medicine, Charlottesville, VA), respectively. DNA was counterstained in 0.1 µg/ml 4,6-diamidino-2-phenylindole. For RanGTP staining (Tedeschi et al., 2007
), cells were pretreated 1 min in 1% Triton-X in PHEM buffer, incubated with AR12 antibody in PHEM buffer containing NOC during the final 30 min of the NOC treatment and then fixed immediately as described above or released in fresh medium before fixation to analyze MT regrowth.
Fluorescence Microscopy and Image Acquisition
All preparations were examined under an Olympus Vanox microscope equipped with a 100x (1.35 numerical aperture) oil immersion objective and a SPOT charge-coupled device camera (Diagnostic Instruments, Sterling Heights, MI). Color-encoded images were acquired using ISO 2000 software (Deltasistemi, Rome, Italy), and they were processed with Adobe Photoshop 7 software (Adobe Systems, Mountain View, CA). Three-dimensional deconvolution and reconstruction was performed on 0.3-µm Z-serial optical sections by using AutoDeblur 9.3 (AutoQuant Imaging, Troy, NY) image processing program.
| RESULTS |
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-tubulin and kinetochore staining enabled us to unambiguously identify the generation of MTs at kinetochores at very early times after NOC removal, in the form of
-tubulin–positive spots at kinetochores (Figure 1A, MT spots at KTs), short MTs emanating from kinetochores (Figure 1A, Short MTs), or supernumerary tubulin foci at the center of a group of kinetochores (Figure 1A, Extra foci). Thirty seconds after NOC release,
70% of cells exhibited evidence of MT nucleation at kinetochores (Figure 1B), demonstrating that MT nucleation at kinetochores is the predominant pathway for MT formation immediately after NOC removal. Over time, the frequency of cells showing kinetochore spots and short kinetochore MTs decreased, with a proportional increase in the frequency of cells with extra foci (Figure 1B), suggesting that kinetochore-nucleated MTs are then organized at their minus ends into pole-like structures. This idea is also supported by the localization to these supernumerary tubulin foci of several noncentrosomal MT minus end-associated proteins with MT-focusing activity (Supplemental Figure 2). The frequency of cells showing only centrosome-based MT arrays increased at later times (Figure 1B), indicating that extracentrosomal foci generated at early times during spindle reassembly are then captured by centrosomal MTs to form a bipolar spindle. Thus, our detailed analysis of MT formation in conjunction with the visualization of the CREST kinetochore marker enabled us to unambiguously identify the generation of MT at kinetochores as the initial moment in MT regrowth in cells recovering from spindle disassembly. This information was still lacking in previous live cell studies (Tulu et al., 2006
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We next investigated Ran, which is clearly required for MT nucleation from chromatin in oocytes and in mammalian cells (reviewed in Ciciarello et al., 2007
), and it has been implicated in the kinetochore pathway after NOC (Tulu et al., 2006
). To directly investigate the requirement for RanGTP in the kinetochore nucleation pathway, we made use of tsBN2 cells, a baby hamster kidney-derived conditional cell line harboring a mutant version of the chromatin-bound exchange factor RCC1 that is degraded at the nonpermissive temperature (Ohtsubo et al., 1989
). Formation of MTs at kinetochores was investigated in tsBN2 cells at the permissive and restrictive temperatures, by combining kinetochore and
-tubulin antibody staining at very early times from NOC release (Figure 2. When NOC release took place at 32°C, when RCC1 is functional (Figure 2A), MT nucleation was activated at kinetochores (Figure 2B, 32°C). The fraction of cells showing MT regrowth at kinetochores increased from 1 to 5 min after NOC release (Figure 2C, 32°C), indicating that MT nucleation from kinetochores greatly contributes to the reformation of the mitotic spindle after NOC release when RanGTP is present. On the contrary, MT nucleation from kinetochores was suppressed at the restrictive temperature for RCC1 activity in the majority of the cells that exhibited MT growing from asters only (Figure 2, B and C, 39°C). This demonstrated that RanGTP production is required for MT nucleation at kinetochores, in addition to its role in nucleation around chromatin.
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-tubulin, and kinetochores in U2OS cells and it did indeed visualize spindle pole- and MT-associated RanGTP in untreated mitotic cells (Figure 3A, dimethyl sulfoxide [DMSO]). When MTs were completely depolymerized in NOC-treated cells, RanGTP did abundantly accumulate on kinetochores, as shown by its localization external to CREST signals (Figure 3A, time 0; see inset). Interestingly, the RanGTP signal was depicted on kinetochores immediately after release from NOC treatment, i.e., before MTs reformed (Figure 3A, time 0). RanGTP localization to kinetochores was still seen at early stages of MT formation at kinetochores, when short MTs appeared from kinetochores (Figure 3A, 45'' release); at later release times, when MTs emanated from most kinetochores, the RanGTP signal still persisted at kinetochores although with a clearly decreased intensity (Figure 3A, 5' release). Measuring the RanGTP signal intensity and normalizing to the CREST signal confirmed the partial loss of RanGTP from kinetochores at late recovery time (0.32 ± 0.04 vs. 0.13 ± 0.02 at 0 and 5' recovery, respectively; >40 centromeres from six to eight cells per experimental point; Figure 3C). The temporal pattern of RanGTP at kinetochores suggests that RanGTP accumulation is locally required before the onset of MT nucleation at kinetochores, transiently persists at kinetochores in the earliest stages of MT formation, and it is eventually followed by dissociation from kinetochores and/or hydrolysis therein.
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In light of the ability of RanGAP1 to activate GTP hydrolysis on Ran and to localize at kinetochores in mitosis, we reasoned that the kinetochore accumulation of RanGTP after NOC might have been associated with a decrease in RanGAP1 concentration therein. In metaphase cells from control cultures, RanGAP1clearly localized at kinetochores (Figure 3B, DMSO), as reported previously (Joseph et al., 2002
). In contrast with this defined localization pattern, no preferential RanGAP1 accumulation was observed during NOC exposure, such that the GTP-hydrolysis factor was absent from kinetochores both after MT depolymerization (Figure 3B, time 0, see inset; quantification in Figure 3D) and when MTs began to reform at kinetochores immediately after NOC release (Figure 3B, 45''). RanGAP1 was again observed at kinetochores after several minutes of NOC release, when plus ends of MTs anchored at the centrosome reached kinetochores in prometaphase/metaphase cells (Figure 3B, 15' and Figure 3D). On the whole, these findings identify the accumulation of the GTP-bound form of Ran as a prerequisite for MT nucleation at kinetochores and demonstrate that NOC-dependent delocalization of RanGAP1 and accumulation of RanGTP is responsible for this localized nucleation.
Centrosome Impairment Stimulates Kinetochore Nucleation
We next asked whether mammalian cells can activate MT nucleation from kinetochores independently of MT-targeting drug treatments. Plk1 is a major centrosomal kinase with key roles in centrosome maturation and spindle assembly (Barr et al., 2004
); its inactivation impairs
-tubulin recruitment at centrosomes (Sumara et al., 2004
; van Vugt et al., 2004
), producing defective MT regrowth after cold treatment in U2OS cells (De Luca et al., 2006
). We therefore used Plk1-specific siRNA to down-regulate the nucleating capacity of centrosomes and to assess whether the kinetochore-associated MT nucleation pathway would be favored. We interfered U2OS cells with control GL2 or Plk1-specific siRNAs, and we verified Plk1 depletion by Western blotting (Supplemental Figure 5). Then, we examined MT regrowth after cold-induced depolymerization in Plk1- and in GL2-interfered U2OS cells shortly after rewarming at 37°C. In GL2-interfered cells, MTs polymerized exclusively from centrosomes upon rewarming (Figure 4, A and B; GL2). On the contrary, in Plk1-depleted cells at 37°C, some MT nucleation was observed around centrosomes, but short MTs also appeared at and between kinetochores (Figure 4A, Plk1– 45''); these MTs further increased in length with time (Figure 4A, Plk1– 65''). MT nucleation was efficiently activated in Plk1-depleted cells, because MTs were observed at all kinetochores and all Plk1-depleted cells exhibited both centrosome-dependent and -independent MT nucleation at 65'' rewarming (Figure 4B); thus, impairing the MT-nucleation ability of centrosomes in Plk1-depleted cells strongly stimulates MT formation at kinetochores. Accordingly, the capacity of centrosomes to develop a nucleating aster was decreased in Plk1-silenced compared with GL2 cells (Figure 4A, 65'', compare GL2 vs. Plk1–). However, kinetochore-nucleated MTs do not elongate much because their minus ends are captured by MTs nucleated by neighbor kinetochores (Figure 4A, 65'', compare microtubule length in centrosome-nucleated MTs in GL2 cells and kinetochore-nucleated MTs in Plk1– cells). These results suggest that nucleation from centrosomes and kinetochores are negatively interrelated, providing new ground for the hypothesis that the two pathways compete for a common supply of tubulin dimers. During a normal mitosis, the high rate of microtubule growth at nucleating asters may depress the capacity of kinetochores to efficiently form MTs.
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-tubulin foci (Figure 5, B and C, +LMB). Accordingly, in these cells RanGAP1 was undetectable on kinetochores during MT regrowth (Figure 5B, +LMB). Interestingly, kinetochore nucleation was achieved in the presence of an intact MT assembly activity of the centrosomes, which developed large nucleating asters upon rewarming (Figure 5B, +LMB). This set of data demonstrates that the Crm1/RanGTP/RanGAP1 complex at kinetochores suppresses kinetochore MT nucleation during spindle assembly in somatic cells and that inhibiting the formation of this complex can reactivate this spindle assembly pathway.
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inhibitory activity. HURP (hepatoma up-regulated protein) is a Ran-regulated factor that localizes along kinetochore microtubules in the vicinity of chromosomes (Koffa et al., 2006
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| DISCUSSION |
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Recent work has demonstrated that a fraction of Ran localizes during mitosis to kinetochores in a complex with the export receptor Crm1 and the RanGAP1/RanBP2 subcomplex; this complex is proposed to work in an autoregulatory loop in which Crm1, in association with RanGTP, is required to localize the RanGAP1-RanBP2 subcomplex, which in turn promotes RanGTP hydrolysis and therefore catalyzes its own release from the kinetochores (reviewed by Arnaoutov and Dasso, 2005
). The effects of disrupting this autoregulatory loop, by either RCC1 inactivation, or by LMB treatment, indicate that the complex functions in maintaining the spindle assembly checkpoint active (Arnaoutov and Dasso, 2003
) and in the formation of mature kinetochore fibers in metaphase (Arnaoutov et al., 2005
). The present data extend the range of events controlled by the kinetochore-associated Ran network. We have detected GTP-bound Ran at kinetochores before the onset of MT nucleation from these sites in NOC-treated cells. The absence of MTs inhibits RanGAP1 accumulation at kinetochores (Joseph et al., 2002
; this study), providing a mechanism whereby the self-regulatory loop that normally regulates nucleotide turnover on Ran (Arnaoutov and Dasso, 2005
) is disrupted, and RanGTP is allowed to accumulate at kinetochores. Inhibition of Crm1 by LMB did also result in the failure to localize RanGAP1 to kinetochores and in the activation of MT nucleation in conditions that otherwise would not allow nucleation from kinetochores, i.e., after cold. These results demonstrate that the RanGTP/Crm1/RanGAP1 complex controls MT formation from kinetochores: an unbalance within the self-regulatory loop toward RanGTP accumulation, either by NOC treatment or through LMB exposure, promotes kinetochore nucleation. Finally, we also show that GTP hydrolysis on Ran does not take place during kinetochore-driven MT nucleation, because RanGAP1, the hydrolysis factor for RanGTP, relocalizes to kinetochores only after K fibers are present. The time course analysis with conformational antibody reported here shows that RanGTP is present at kinetochores during the initial stages of MT regrowth, when kinetochore-mediated MT nucleation is highly active, but then its concentration gradually decreases, suggesting that it possibly dissociates from the kinetochores after activation of MT nucleation and becomes hydrolyzed.
On the basis of our findings, we propose the following model for the role of the Ran network in MT nucleation at kinetochores (Figure 7). Both Crm1 and Ran localize at kinetochores, where the latter is loaded with GTP by chromatin-bound RCC1; this establishes the potential for forming ternary complexes with NES-containing kinetochore proteins. When, in a normal mitosis, MTs capture kinetochores, RanGAP1 is loaded on kinetochores, and therein it can become part of the complex with RanGTP and Crm1: when this occurs, RanGTP hydrolysis is triggered in the complex, and RanGDP is released from the kinetochores (Figure 7, left). A similar autoregulatory Ran "loop," based on RanGAP1 recruitment at kinetochores and subsequent RanGTP hydrolysis, regulates kinetochore fiber structure and spindle checkpoint timing at the meta- to anaphase transition (Arnaoutov and Dasso, 2005
). In the absence of MTs, such as during NOC treatment, RanGAP1 fails to reach kinetochores, with a consequent continuous RanGTP accumulation therein, resulting in the activation of kinetochore MT nucleation (Figure 7, top middle). Crm1 inhibition also activates nucleation from kinetochores by preventing the formation of a stable complex with RanGTP and RanGAP1, thereby also yielding RanGTP accumulation at kinetochores (Figure 7, bottom middle). We propose that accumulated RanGTP at kinetochores promotes the localized release of nucleating and stabilizing factors (Figure 7, right). More than one pathway may be envisaged for activation of MT nucleation from kinetochores when spindle MTs are disrupted or centrosomal nucleation is weakened. First, high concentrations of RanGTP at kinetochores may release NLS-containing MT-regulatory factors from the "sequestering" effect of classical importin
/β complexes, as suggested in TPX2 (Tulu et al.,2006
). Furthermore, kinetochore-associated RanGTP may override the inhibitory function exerted by importin β on HURP and/or other stabilizing factors, such as NuSAP, another MT-stabilizing and -bundling protein that is enriched at the central part of the spindle (Ribbeck et al., 2007
); such factors would then contribute to MT formation/stabilization at kinetochores. Finally, the kinetochore-associated Crm1 fraction, in concert with RanGTP, may recruit NES-containing proteins therein; some of these NES proteins may have nucleating activity and contribute to kinetochore-activated MT nucleation. The relative importance of these different mechanisms remains to be clarified.
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In conclusion, our data indicate that in normal conditions, a continuous cycle of GTP exchange and hydrolysis takes place on the kinetochore-associated fraction of Ran, which limits MT nucleation and/or does not support the stabilization of nucleated MTs from kinetochores; in contrast, conditions in which the kinetochore RanGTP pool is stabilized activate kinetochore nucleation. We therefore suggest that localized RanGTP abundance orchestrates the relative contribution of MT assembly pathways operating in different subcellular localizations, i.e., centrosomes, chromatin, and kinetochores in mammalian cells. Our study adds a new function for the versatile protein Ran at kinetochores, by showing its role in fine-tuning the multiple paths of spindle formation.
| ACKNOWLEDGMENTS |
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| Footnotes |
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Address correspondence to: Francesca Degrassi (f.degrassi{at}caspur.it)
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