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Vol. 19, Issue 7, 2729-2740, July 2008
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Apoptosis Research Centre, Children's Hospital of Eastern Ontario Research Institute, Ottawa, ON K1H 8L1, Canada
Submitted February 1, 2008;
Revised April 4, 2008;
Accepted April 14, 2008
Monitoring Editor: Kunxin Luo
| ABSTRACT |
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| INTRODUCTION |
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Several members of the IAP family harbor a carboxy terminus RING domain that functions as an E3 ubiquitin ligase (Yang et al., 2000
). In the ubiquitin pathway, the E3 ubiquitin ligase provides the specificity and catalyzes the transfer of ubiquitin moieties to the substrate (Sun, 2006
). In thymocytes, apoptotic stimuli such as glucocorticoid and etoposide can activate E3 ubiquitin ligase of XIAP, causing XIAP autoubiquitination and autodegradation (Yang et al., 2000
). As such, stable expression of XIAP that lacks the RING domain is more resistant than wild-type XIAP in apoptosis-mediated degradation (Yang et al., 2000
). This resistance to XIAP degradation consequently protects the thymocytes from apoptosis (Yang et al., 2000
), suggesting that the RING domain has proapoptotic functions. Similarly, the RING domain of cIAP1 also exhibits proapoptotic activity. During Sindbis virus–induced apoptosis in HEK293 cells, cIAP1 is cleaved to produce a carboxy-terminal fragment that contains the CARD and the RING domain (Clem et al., 2001
). The ectopic expression of this cIAP1 carboxy fragment can induce apoptosis in BHK, CHO, and HEK293 cells (Clem et al., 2001
). The proapoptotic activity of cIAP1-RING is further evidenced when its forced expression sensitizes melanoma cell lines to cisplatin-induced apoptosis (Silke et al., 2005
). Therefore, because overexpression of the RING domain of cIAP1, as well as cIAP2, has been found to down-regulate XIAP in a proteasomal-dependent manner, the sensitization to apoptosis by forced cIAP1-RING expression has been suggested to be due to the reduction in XIAP level (Silke et al., 2005
). In spite of these previous overexpression and in vitro studies, it remains unclear whether physiological levels of cIAP1 impacts on XIAP abundance.
To gain further insight into RING-mediated IAP turnover, we investigated the role of cIAP1 in regulating IAP levels by a vector-based expression system and siRNA-mediated knockdown. We show that the RING domain of cIAP1 is capable of down-regulating the RING-bearing cIAP1, cIAP2, XIAP, and Livin, but not NAIP and Survivin that do not contain a RING domain. Although the degradation of cIAP1 and cIAP2 are ubiquitination-dependent, unexpectedly, the down-regulation of XIAP and Livin by cIAP1-RING can proceed independently of polyubiquitination. The importance of cIAP1-RING in IAP turnover under pathophysiological condition was highlighted by XIAP resistance to degradation in the absence of cIAP1 in response to the cytotoxic agents cisplatin and doxorubicin. Interestingly, cIAP1 and cIAP2 are nonredundant with respect to XIAP regulation, because endogenous cIAP2 does not appear to play a role in down-regulating XIAP. Together, these results show that cIAP1, through its E3 ligase domain, can regulate the levels of RING-bearing IAPs by targeting them for proteasomal degradation via ubiquitin-dependent and -independent pathways.
| MATERIALS AND METHODS |
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Adenovirus, Plasmid DNA Constructs, and Mutagenesis
Adenovirus encoding BCL2 was obtained from Vector Biolabs (Burlingame, CA). pcDNA3-6myc-cIAP1, cIAP, XIAP, Livin, Survivin, and NAIP were previously described (Liston et al., 1996
; Arora et al., 2007
). The full-length coding sequence of Xenopus E1 (Open Biosystems, Huntsville, AL) was subcloned into pLenti6-directional-TOPO vector (Invitrogen). pCMV-ubiquitin, pCMV-ubiqinitin-K48R, and pCMV-ubiquitin-4K7R were kindly provided by Dr. Z.-X. Jim Xiao (Boston University School of Medicine; Sdek et al., 2005
). pCMV-hemagglutinin (HA)-ubiquitin was constructed by inserting sequence that encodes for the HA into pCMV-ubiquitin. Additional ubiquitin mutants were constructed from pCMV-ubiquitin and pCMV-ubiquitin-K48R. XIAP mutants were constructed from pcDNA3-6myc-XIAP. pTREx-cIAP1-CR-H588A was constructed from pTREx-CARD-RING domain of cIAP1 (cIAP1-CR). Other E3 ligase mutants were constructed from their corresponding wild types. Mutagenesis was carried out by using Gene-Tailor Site-Directed Mutagenesis System (Invitrogen). Primer sequences are available upon request. All mutations were confirmed by sequencing.
Transfection of Small Interfering RNA
Annealed double-stranded SMARTpool small interfering RNAs (siRNAs) for E1, ubcH5a, ubcH5b, ubcH5c, ubcH6, siGENOME siRNA for cIAP1 (duplex 10, 5'-AAAGAGAGCCAUUCUGUUCUU), cIAP2 (duplex 2, 5'-UCUAACACAAGAUCAUUGAUU and duplex 9, 5'-AUUCGGUACAGUUCACAUGUU), and nontargeting (NT) luciferase control were purchased from Dharmacon Research (Boulder, CO). Cells were cultured in six-well plates and transfected at 50% confluency with a concentration of 5 nM of each siRNA in using DharmaFECT I Reagent (Dharmacon) according to the manufacturer's protocol. When multiple siRNAs were used for transfections, the total concentration of siRNAs transfected was normalized by the inclusion of the nontargeting control. For E2 experiments in Supplementary Figure S3, plasmids DNA and total 20 nM siRNA were transfected together with LipoFectamine 2000 as described above. In some experiments, cells were exposed to proteasome inhibitor MG132 (Calbiochem, La Jolla, CA), lactacystin (Calbiochem), or ALLN (Sigma, St. Louis, MO).
Induction of Apoptosis
Cisplatin (Sigma), doxorubicin (Sigma), or anti-fas antibody (Upstate Biotechnology, Lake Placid, NY) were used at 20 µM, 10 µM, and 100 ng/ml, respectively. For fas-mediated cell death, cell viability was determined using the WST-1 reagent according to the manufacturer's instructions (Boehringer Mannheim, Laval, QC, Canada).
Protein Preparation and Immunoprecipitation
Cells were collected by centrifugation and lysed in 50 mM Tris-HCl, pH 8.0, containing 1% Triton X-100, 150 mM NaCl, 1 mM NaF, 0.1 mM phenylmethylsulfonyl fluoride, 5 µg/ml pepstatin A, and 10 µg/ml each of leupeptin and aprotinin (lysis buffer), and insoluble cell pellets were collected by centrifugation at 12,000 x g for 30 min at 4°C. The Triton X-100–insoluble pellets were solubilized with sample buffer (62.5 mM, Tris-HCl, pH 6.8, containing 2% SDS, 1% β-mercaptoethanol, and 5% glycerol), and supernatants were collected for protein determination by Bio-Rad Protein Assay (Bio-Rad, Mississauga, ON, Canada) using bovine serum albumin as a standard. For immunoprecipitation, anti-myc antibody–conjugated agarose (Sigma) was used to isolate proteins from Triton X-100 extracts prepared as above. The immunoprecipitates were isolated and separated on SDS-PAGE as previously described (Cheung and Gurd, 2001
).
Western Immunoblotting
For immunoblotting, equal amounts of SDS-solubilized samples were separated on polyacrylamide gels and transferred to nitrocellulose as previously described (Cheung and Gurd, 2001
). After protein transfer, individual proteins were detected by Western immunoblotting using the following antibodies: E1 (Abcam, Cambridge, MA), FLAG M2 (Sigma), GAPDH (Advanced ImmunoChemical, Long Beach, CA), HA (Sigma), c-myc (Stressgen, San Diego, CA), UbcH5, UbcH6, ubiquitin (Chemicon, Temecula, CA), V5 (Sigma), XIAP (monoclonal, BD Biosciences, San Jose, CA; rabbit polyclonal as described before (Li et al., 2001
) and anti-RIAP3 that recognizes XIAP (Aegera Oncology, Montreal, QC, Canada), and vimentin (BD Biosciences). Polyclonal anti-RIAP1 antibodies that recognize both cIAP1 and cIAP2 were generated in the laboratory as described previously (Holcik et al., 2002
). Bound primary antibodies were reacted with secondary antibodies conjugated with Alexa Fluor 680 (Molecular Probes) or with IRDye800 (Rockland Biosciences, Gilbertsville, PA), and the infrared fluorescence signals were detected using Odyssey Infrared Imaging System (Li-Cor, Lincoln, NE; Cheung et al., 2006b
).
| RESULTS |
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Degradation of XIAP during Apoptosis is cIAP1-dependent
To examine RING-mediated metabolism of XIAP in a pathophysiological context, we assessed the dependency of apoptosis-mediated XIAP turnover on the proteasome. In response to cisplatin and doxorubicin, both cytotoxic agents that induce apoptosis, XIAP was down-regulated (Figure 6, A and B). This down-regulation of XIAP, however, were prevented by the proteasome inhibitors ALLN and lactacystin (Figure 6, A and B). To test whether cIAP1 could play a role in XIAP turnover during apoptosis, we knocked down cIAP1 by siRNA before exposure to apoptotic stimuli. XIAP level was decreased in response to cisplatin and doxorubicin; however, in the absence of endogenous cIAP1, but not cIAP2, this decrease was largely prevented (Figure 6, C–E). As expected, the down-regulation of cIAP1 resulted in the up-regulation of cIAP2 protein (Figure 6, C and E; Conze et al., 2005
). To determine whether this cIAP2 up-regulation could have affected XIAP level, both cIAP1 and cIAP2 were down-regulated with siRNA before cisplatin or doxorubicin treatment. The silencing of the up-regulated cIAP2 has no additional effect on the level of XIAP (Figure 6, C and E), suggesting that cIAP1 alone mediated the regulation of XIAP expression level. These results indicate that XIAP degradation by cytotoxic drugs is dependent on cIAP1.
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Loss of cIAP1 Protects against Fas-mediated Cell Death When the Mitochondrial Pathway Is Blocked by BCL2
Next, we assess whether the physiological level of XIAP, as mediated by cIAP1, affects cell viability. Although the knockdown of cIAP1 protects against XIAP loss in response to cisplatin and doxorubicin, they are poor choices for measuring cell viability affected by the physiological level of XIAP in the absence of cIAP1. Both cisplatin and doxorubicin activate the intrinsic pathway that engages the mitochondria for the release of Smac, an antagonist to the IAPs (Hunter et al., 2007
). In the absence of cIAP1, a potential Smac sink is lost (Wilkinson et al., 2004
), and hence the release of Smac can negate the effects of a sustained level of XIAP. To circumvent this caveat, we opted to activate the extrinsic apoptotic pathway with CD95/Fas. SF295 glioblastoma is a Fas "type I" tumor cell line for which upon fas ligand engagement, a death-inducing signaling complex (DISC) is formed to activate caspase-8 for the initiation of apoptosis (Scaffidi et al., 1998
; Algeciras-Schimnich et al., 2003
). In addition to DISC formation in response to Fas ligand, "type I" cells also exhibit a loss of mitochondrial transmembrane potential that promotes the release of Smac (Scaffidi et al., 1998
; Du et al., 2000
). To restrict apoptosis to the DISC arm of the pathway, we blocked the loss of mitochondrial transmembrane potential by inducing BCL2 expression with an adenoviral vector. To ensure that any effect seen in our system is due to changes in XIAP level but not cIAP2 level, we silenced protein expression of cIAP2 in addition to cIAP1. The knockdown of cIAP1 and cIAP2 partially blunted Fas ligand–mediated down-regulation of XIAP (Figure 7A), and protected SF295 cells from cell death (Figure 7B). These results suggest that cIAP1-mediated degradation of XIAP plays a role in the propagation of apoptosis.
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| DISCUSSION |
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We have established that cIAP1 is important for the physiological degradation of XIAP in response to cytotoxic agents in vivo. On exposure to the cytotoxic compounds, protein expression levels of cIAP1, cIAP2, and XIAP were reduced. A previous study has shown that the overexpression of a carrier protein (mbw) that is fused with the cIAP1-RING domain can down-regulate XIAP (Silke et al., 2005
). Using siRNA to target endogenous cIAP1, we show that XIAP degradation mediated by cIAP1 occurs after treatment with the cytotoxic agents cisplatin and doxorubicin. When basal cIAP1 expression is repressed, these drugs are unable to effectively cause the removal of XIAP. The upstream events that lead to the down-regulation of full-length cIAP1 and cIAP2 in response to the cytotoxic agents remain unclear, and it is potentially the result of reductions in mRNA levels, protein translation, or posttranslation processing. Posttranslational modifications are conceivable, as seen, for example, in the Sindbis virus–induced cleavage of cIAP1 by caspase-3, which releases the RING-containing carboxyl terminal of cIAP1 (Clem et al., 2001
) that can facilitate the down-regulation of XIAP. Collectively, these observations support the concept that IAP-IAP interactions (Dohi et al., 2004
; Silke et al., 2005
; Arora et al., 2007
) play roles in regulating their relative abundance to impact upon the progression of apoptosis.
The RING domain of cIAP1 has E3 ubiquitin ligase activity that promotes both auto-ubiquitination and transubiquitination of other interacting molecules such as Smac and TRAF2 (Yang et al., 2000
; Hu and Yang, 2003
; Samuel et al., 2006
). Remarkably, we find that ubiquitination is not a required factor in the cIAP1-CR–mediated degradation of XIAP and Livin. This finding is in marked contrast to cIAP1 and cIAP2, which do require ubiquitination for their turnover, as expected. Notably, we show that cIAP1-CR–mediated down-regulation of XIAP still occurs under various conditions that are clearly adverse for XIAP ubiquitination, including, in the absence of the ubiquitin-activating E1 and the cognate ubiquitin-conjugating E2, in the presence of the dominant negative Ub-4K7R and in the presence of XIAP ubiquitination sites rendered unavailable by mutagenesis. A recent report shows that the lack of XIAP polyubiquitination fails to affect caspase inhibition, suggesting that polyubiquitination is not the sole determinant of XIAP function (Shin et al., 2003
). Our findings support this concept by showing that cisplatin or overexpression of cIAP1-CR is able to down-regulate XIAP in E1-null cells, indicating that an alternative mechanism is available for XIAP down-regulation. Notably, E3 ubiquitin protein ligases have been shown to associate with proteasomal subunits (Xie and Varshavsky, 2002
). Thus, it is possible that XIAP and Livin, through RING-RING binding to cIAP1-RING (Silke et al., 2005
), are able to bypass polyubiquitination and still be recruited to the proteasome for proteolysis.
The targets of IAP-RING domain E3 ligase include non-IAPs that are components of the NF-
B pathways. For instance, in vitro, the E3 ligase of cIAP2 facilitates the K63-polyubiquitination of RIP1 (Wu et al., 2006
), a key event in tumor necrosis factor (TNF)-
–induced NF-
B activation (Chen, 2005
). In addition, the E3 RING domain of cIAP1 also promotes the ubiquitination of the RING-bearing TRAF2, an adaptor and a signal transducer of the TNF-
–signaling pathway (Samuel et al., 2006
). More recently, the E3 ligase of cIAP1 and cIAP2 was shown to repress the noncanonical NF-
B pathway by promoting proteasomal degradation of NIK (Varfolomeev et al., 2007
). To dissect the involvement of cIAP1 in IAP versus non-IAP regulation, such as in the NF-
B pathways, further characterization of RING specificity is required. The carboxy-terminal six residues of cIAP1 were found to be essential for the binding and degradation of XIAP (Silke et al., 2005
). Given the conservation of the RING domains within the IAPs, and the divergence between IAP-RING and non-IAP RING finger proteins (i.e., c-cbl, TRAF2, and TRAF4; Silke et al., 2005
), it is likely that these six residues of cIAP1 might affect the interactions between cIAP1 and all other RING-bearing IAPs, but not non-IAP RING domain proteins. Moreover, the TRAF2-interacting motif of cIAP1 has been mapped to the BIR1 domain (Samuel et al., 2006
). The construction of mutants that restrict cIAP1 regulation, specifically toward IAPs or non-IAPs, will facilitate the delineation of various cIAP1 functions, with respect to NF-
B signaling pathway and apoptosis.
The high degree of homology between cIAP1 and cIAP2 suggests some level of functional redundancy (Hunter et al., 2007
). Because the absence of cIAP1 leads to cIAP2 up-regulation in many cell types, silencing of cIAP1 is a convenient way to study functional redundancy between the two IAPs in vivo. Unexpectedly, we found that this up-regulation of cIAP2 to be insufficient for apoptosis-induced down-regulation of XIAP (Figure 6, C and E). This finding suggests that cIAP2 expression, at a physiological level, is unable to compensate for the lack of cIAP1 with respect to the RING-mediated down-regulation of XIAP during apoptosis. Even though up-regulated cIAP2 is a poor substitute for cIAP1 in RING-mediated degradation, the protein levels of XIAP in cIAP1 knockout mice remain constant in comparison with the wild type (Conze et al., 2005
and our unpublished observations). However, because elevated XIAP expression creates a favorable condition for tumorigenesis (Hunter et al., 2007
), this lack of change in XIAP protein levels might reflect an active process during normal development by which an organism maintains homeostasis either by curtailing expression of XIAP in individual cells, or by eliminating cells that express excessive level of XIAP.
As a major factor in tumorigenesis, XIAP has emerged to be an important target in a number of therapeutic strategies that aim to kill tumor cells (Cheung et al., 2006a
). Direct genetic evidence demonstrated that chromosome amplification of the 11q21-q23 region, which encompasses both cIAP1 and cIAP2, is seen in a variety of malignancies (Imoto et al., 2002
; Dai et al., 2003
). In certain context, cIAP1 can be considered an oncogene as it has been found to transform murine cells and produce hepatomas in vivo in cooperation with the oncogene Yap (Zender et al., 2006
). As well, Livin is also emerging as a promising therapeutic target for the treatment of malignancy (Chang and Schimmer, 2007
). The metabolism of these IAPs is of interest in the field of apoptosis and proliferative and degenerative diseases. There exists a concept in the literature that implicitly assumes that since the RING domain of the IAPs has ubiquitin E3 ligase activity, ubiquitination is a prerequisite for proteasome-mediated IAP degradation, as exemplified by several recent reviews (Ni et al., 2005
; Vaux and Silke, 2005
; Dean et al., 2007
). Our data strongly imply that the RING domain of cIAP1 regulates all RING-bearing IAPs via proteasomal degradation, by ubiquitin-dependent and ubiquitin-independent pathways.
| ACKNOWLEDGMENTS |
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| Footnotes |
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* These authors contributed equally to this work. ![]()
Address correspondence to: Robert G. Korneluk (bob{at}mgcheo.med.uottawa.ca)
Abbreviations used: BIR, baculovirus IAP repeat; cIAP1, cellular inhibitor of apoptosis 1; cIAP2, cellular inhibitor of apoptosis 2; CR, CARD-RING; DISC, death-inducing signaling complex; IAP, inhibitor of apoptosis; siRNA, small interfering RNA; Ub, ubiquitin; XIAP, X-linked IAP.
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