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Vol. 20, Issue 1, 498-508, January 1, 2009
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*Department of Cell Biology, Institut Cochin, Université Paris Descartes, Centre National de la Recherche Scientifique Unité Mixte de Recherche 8104, Institut National de la Santé et de la Recherche Médicale U567, 75014 Paris, France;
LaboRetro, Institut National de la Santé et de la Recherche Médicale U758 Ecole Normale Supérieure de Lyon, 69364 Lyon, France; and
Centre National de la Recherche Scientifique Unité Mixte de Recherche 6098, Luminy, 13288 Marseille, France
Submitted February 21, 2008;
Revised October 3, 2008;
Accepted October 15, 2008
Monitoring Editor: Keith E. Mostov
| ABSTRACT |
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80%. Higher virus infectivity upon Dlg1 depletion correlates with increased Env content in cells and virions, whereas the amount of virus-associated Gag or genomic RNA remains identical. Dlg1 knockdown is also associated with the redistribution and colocalization of Gag and Env toward CD63 and CD82 positive vesicle-like structures, including structures that seem to still be connected to the plasma membrane. This study identifies both a new negative regulator that targets the very late steps of the HIV-1 life cycle, and an assembly pathway that optimizes HIV-1 infectivity. | INTRODUCTION |
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, which interfere with the early steps of replication (Nisole et al., 2005
HIV-1 Gag is a 55-kDa precursor (Pr55), which contains the structural domains Matrix MAp17, Capsid CAp24, Nucleocapsid NCp7, and p6 as well as the spacer peptides 1 (SP1) and 2 (SP2) (reviewed in Muriaux et al., 2004
). These Gag domains drive viral assembly and budding (reviewed in Demirov and Freed, 2004
). The MA domain is involved in Gag anchoring to the internal face of cell membranes by virtue of an N-terminal myristate and a cluster of conserved basic residues (Spearman et al., 1994
; Freed et al., 1995
). The MA domain also contains endocytic-sorting motifs able to recruit the clathrin adaptor protein (Batonick et al., 2005
; Dong et al., 2005
; Camus et al., 2007
) and governs incorporation of the envelope glycoprotein (Env) into nascent particles (Cosson, 1996
; Hourioux et al., 2000
; Lopez-Verges et al., 2006
). The NC pilots genomic RNA (gRNA) selection and incorporation during Gag assembly, and together with the CA and SP1 domains, contributes to Gag multimerization (Mammano et al., 1994
; Krausslich et al., 1995
; Berthoux et al., 1997
; Zhang et al., 1998
; Liang et al., 2003
). The p6 domain controls the budding process through the recruitment of proteins of the ESCRT complexes that belong to the budding machinery located in late endosomes/multivesicular bodies (Gottlinger et al., 1991
; Garrus et al., 2001
; Strack et al., 2003
). Depending on cell types and/or other factors, virus budding seems to occur at the plasma membrane or in endosomes (Ono and Freed, 2004
; Grigorov et al., 2006
). HIV-1 egress seems to be gated through special membrane microdomains, notably endosome-like domains (Booth et al., 2006
) and microdomains enriched in proteins of the tetraspanin family, such as CD63, CD81 and CD82 (Nydegger et al., 2006
; Jolly and Sattentau, 2007
).
Understanding retrovirus/host cell interactions has long been challenging and has led to the recent discoveries of essential cofactors and restriction factors. Along this line, we previously reported that the human homologue of Drosophila Discs Large protein (Dlg1/hDlg/SAP97) is a binding partner of the HTLV-1 Env glycoprotein that regulates HTLV-1 transmission (Blot et al., 2004
). Dlg1 is a cytosolic protein that is recruited beneath the plasma membrane upon cell contacts. There, Dlg1 functions as a scaffolding, anchoring, and adaptor protein, allowing the assembly of multiprotein complexes and their connection to downstream signaling molecules and/or to cytoskeleton-associated molecules (Funke et al., 2005
). Dlg1 belongs to the superfamily of membrane associated guanylate kinases (MAGUKs), which are characterized by a similar structural organization forming protein interacting modules (Funke et al., 2005
). Thus, Dlg1 possesses three PSD95/DLG/ZO-1 (PDZ) domains that bind the cytoplasmic tail of integral membrane proteins, a Src homology domain type 3 (SH3) domain, believed to recruit cell signaling molecules (Hanada et al., 1997
), a variable HOOK domain, and a guanylate kinase (GUK) domain that is catalytically inactive but recruits cytoskeleton-associated proteins (Funke et al., 2005
). Dlg1 is expressed in most tissues and has been readily detected in human T cell lines (Xavier et al., 2004
), activated primary T cells (Blot et al., 2004
), and mouse primary CD4+ T cells (Round et al., 2005
). During T cell activation, Dlg1 rapidly translocates to the immunological synapse and associates with early players of T cell activation (Xavier et al., 2004
; Round et al., 2005
).
In the aforementioned study (Blot et al., 2004
), we found that Dlg1 binds to the cytoplasmic tail of HTLV-1 Env and that Dlg1 colocalizes with HTLV-1 Env and Gag at the plasma membrane of T lymphocytes. We further obtained evidence that Dlg1 also interacts with HTLV-1 Gag, at least in vitro (unpublished data). Because similar cell host factors have been shown to be recruited by Gag proteins from distinct retrovirus families (Demirov and Freed, 2004
), we investigated whether Dlg1 could interact with other retroviral Gag proteins. In this study, we identify Dlg1 as a novel binding protein for HIV-1 Gag that modulates the distribution of the HIV-1 structural proteins and HIV-1 infectivity.
| MATERIALS AND METHODS |
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Antibodies
Anti-CAp24 rabbit and mouse antibodies were obtained from the National Institutes of Health (Bethesda, MD) AIDS Research and Reference Reagent Program, anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and anti-lysosomal membrane protein (LAMP) 2 monoclonal antibodies (mAb) were from Santa Cruz Biotechnology (Tebu, France), and the anti-HIV-1 gp120 110-H and anti-gp41 41-A mAbs were from Pasteur Institute (Paris, France). A serum obtained from an HIV-1–infected patient (anti-HIV-1 serum) was also used for Gag precipitation or detection. Dlg1 was precipitated using a rabbit serum raised against the N-terminal domain of Dlg1, a region that is unique to Dlg1 among MAGUK family members. For immunoblots, Dlg1 was detected using either the 2D11 mAb also directed against the N-terminal domain of Dlg1 (Santa Cruz Biotechnology) or the anti-PDZ mAb (clone 0.T.124; Euromedex, Souffelweyersheim, France). The mAb against CD63 (TS63) and CD82 (
C11) were kindly provided by H. Conjeaud (Institut Cochin, Paris, France).
Plasmids and siRNA
The pHIV-1 LAI.2 proviral plasmid was obtained from the AIDS Research and Reference Reagent Program. The pcDNA3-Gag vector used in the glutathione transferase (GST) pull-down assay was obtained by cloning the polymerase chain reaction (PCR)-amplified Gag sequence of the SVC21BH10 isolate into pcDNA3. Stop codons were introduced in the gag gene by PCR-coupled mutagenesis, allowing the production of truncated gag proteins MACASP1NC and MACA. The GST proteins coupled to the different Gag domains have been described previously (Douaisi et al., 2004
). The HIV-1 Env expressor pMA-243 (
Gag/Pol LAI provirus) (Schwartz et al., 1994
) was obtained from M. Alizon (Paris, France). The plasmid encoding SAP97, the rat homologue of Dlg1 (93% identity with human Dlg1) that contains the I1 and I3 inserts (Godreau et al., 2003
) was kindly provided by S. Hatem (INSERM 621, Paris, France). The Dlg1 domains were PCR amplified from the pCDNA3-Dlg1 vector (Lue et al., 1994
) and cloned in frame with the GST sequence in the pGEX-2T vector. The control siRNA (Blot et al., 2004
) and the siRNA directed to the N-terminal domain specific for Dlg1 (UGAAGUGAUAGGUCCAGAA, nucleotides 569–587; accession no. NM_004087) were obtained from QIAGEN (Courtaboeuf, France). The same nucleotide sequences were used to produce the control and anti-Dlg1 shRNA plasmid using the lentiviral vector described in Mangeot et al. (2004)
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Transfection and Infection
293T cells in 10-cm Petri dishes were transfected using the calcium phosphate procedure with 2.5 µg of pHIV-1 LAI.2. The total amount of DNA was maintained at 5 µg by using the pSG5M vector. For Dlg1 knockdown in 293T, two rounds of transfection were performed, the first with 5 µl of a 100 µM solution of siRNAs and the second, 24 h later, with both 2.5 µg of pHIV-1 LAI.2 and the same amount of siRNAs. MOLT-4 and Jurkat T cells (1.5 x 106 cells/well) were transfected in six-well plates using 6 µl of DMRIE-C reagent (Invitrogen, Cergy-Pontoise, France) mixed with 4 µg of pHIV-1 LAI.2 and either 2 µg of a lentiviral vector producing the shRNA sequences or 2 µl of a 100 µM solution of siRNA.
For HIV-1 LAI production, 293T cells were transfected with 5 µg of the pLAI.2 plasmid, and supernatants were collected after 48 h of culture and were conserved at –80°C. The amount of virus was measured using enzyme immunoassay (EIA) assay (see below). For cell infection, 107 CD4+ CEM T cells were incubated with 200 ng of virus in 1 ml of Complete RPMI medium containing 10 mM HEPES and 2 µg/ml DEAE dextran for 3 h at 37°C, and then they were washed twice in culture medium and kept in culture for 7 d before use.
GST Pull-Down Assay
GST proteins were produced in Escherichia coli, immobilized on glutathione-agarose beads (Sigma, Paris, France) and stored at 4°C. Gag or Dlg1 proteins were synthesized in the presence of [35S]methionine and cysteine (ProMix; GE Healthcare, Little Chalfont, Buckinghamshire, United Kingdom) using the TNT quick-coupled transcription/translation system (Promega, Charbonnieres-les-Bains, France). Equal amounts of immobilized GST-proteins were incubated with equal amounts of radiolabeled Gag proteins in binding buffer (50 mM HEPES, pH 7.0, 150 mM NaCl, 5 mM EDTA, 1 mM dithiothreitol, 0.1% NP-40, 50 mM NaF, and Complete protease inhibitors [Roche Applied Science, Meylan, France]) during 4 h at 4°C. After five washes in binding buffer, the bound proteins were resolved by SDS-polyacrylamide gel electrophoresis (PAGE), and the radioactive species were quantified using a Storm-850 PhosphorImager (GE Healthcare). For the RNase/DNase assay, Gag proteins produced using the TNT system were preincubated with RNase or a DNase/RNase mix before performing the GST-Dlg1 pull-down assay. Pulled-down Gag proteins were then revealed by Western blot using the mouse anti-p24 antibody as primary antibody.
Protein Extracts, Immunoprecipitation, and Western Blot
Cells were lysed in 1 ml of lysis buffer (50 mM Tris-HCl, pH 7.2, 15 mM NaCl, 1% NP-40, 1 µM Na3VO4, 1 nM okadaic acid, and Complete protease inhibitors (Roche Applied Science) for 30 min on ice and centrifuged for 20 min at 14,000 rpm. Proteins were precipitated using protein A-conjugated agarose beads preincubated with 2 µg of appropriate antibodies for 30 min on ice before addition of cell lysates for an overnight incubation at 4°C. For control experiments, excess of control serum was used to ensure the detection of any possible unspecific recognition. Immunoprecipitates were washed five times in lysis buffer and boiled in 2x Laemmli buffer. For control of protein expression, 50 µl of cell lysates was mixed with 2x Laemmli buffer and boiled. Purified virions were obtained from filtered culture supernatants by centrifugation through a cushion of 25% sucrose in TNE (100 mM NaCl, 10 mM Tris-HCl, pH 7.4, and 1 mM EDTA), at 35,000 rpm for 1 h at 4°C in a Beckman SW21 rotor. For the incorporation experiment, viruses were first centrifugated through a 25–45% sucrose gradient. Virus pellets were lysed in Laemmli buffer, and total viral proteins were analyzed as described above. Gag proteins were detected using a 1/2500 dilution of the anti-HIV human serum or a 1/5000 dilution of the mouse anti-p24, endogenous Dlg1 by using a 1/2000 dilution of the anti-PDZ mAb, HIV-1 Env gp160, or gp120 with a 1/1000 dilution of the 110-H mAb, HIV-1 gp41 with a 1/1000 dilution of the 41A mAb, and GAPDH with a 1/2000 dilution of the mouse anti-GAPDH mAb. All peroxidase-coupled secondary antibodies were from Promega and were used at a 1/5000 dilution. Scanning of Western blot membranes was performed with an EPSON device, and signal densities were calculated using the ImageJ software (W. Rasband, National Institutes of Health).
Quantification of Gag Production and Virus Infectivity
Forty-eight hours after transfection, 5 ml of fresh medium was added, and the cells were cultivated for 24 h. Supernatants were harvested, centrifuged for 5 min at 3000 rpm and filtered through a 0.45-µm pore size filter. Virus production was assessed by measuring p24 concentration using a commercial antigen capture EIA (INNOTEST HIV antigen mAb; InGen, Chilly Mazarin, France), according to the manufacturer's instructions. The infectivity of viral supernatants was determined using the indicator HeLa-P4 cells that express CD4 and carry the bacterial lacZ gene under the control of the HIV-1 long terminal repeat (LTR). The day before infection, 8 x 103 HeLa-P4 cells were plated in triplicate in 96-well plates. The cells were incubated with volumes of supernatants adjusted to contain 1 ng of CAp24 for 36 h at 37°C, and then they were washed and fixed. β-Galactosidase activity was measured by a colorimetric assay based on cleavage of chlorophenol red-β-d-galactopyranoside (CPRG), as described previously (Dumonceaux et al., 1998
).
RNA Isolation and Quantitative PCR
Virions were purified from filtered supernatants by centrifugation through a cushion of 25% sucrose in TNE, at 35,000 rpm for 1 h at 4°C in a SW21 rotor (Beckman Coulter, Fullerton, CA), and RNA was isolated using the RNeasy mini kit (Invitrogen). The efficiency of the reverse transcription (RT)-PCR reactions was normalized by adding Alien QRT-PCR Inhibitor Alert (Stratagene, Amsterdam, The Netherlands) to each sample. For cDNA synthesis, the following reagents were added to equal amounts of RNA: 32 units of Moloney murine leukemia virus-reverse transcriptase (Invitrogen), 0.5 mM dNTP, 5 mM 1,4-dithiothreitol, 4 µl of first-strand buffer (Invitrogen), 40 units of RNase Out Recombinant Ribonuclease Inhibitor (Invitrogen), and 150 ng of random primers (Invitrogen). The mix was incubated at 37°C for 50 min, and the reaction was stopped by increasing the temperature to 70°C for 15 min.
Quantification of the HIV-1 cDNA copy number was performed by real-time PCR by using previously described HIV-1–specific primers that anneal in the U5 region of the LTR (MH 531: 5'-TGTGTGCCCGTCTGTTGTGT-3') and in the upstream region of gag (MH 532: 5'-GAGTCCTGCGTCGAGAGAGC-3') and primers specific for the Alien sequence provided by the manufacturer. U5-gag sequences were amplified in duplicate from 1/10 of cDNA solution in reaction mixtures containing 1x Light Cycler Fast Start DNA Master SYBR Green (Roche Applied Science), 4 mM MgCl2 and 300 nM (each) forward and reverse primers in a final volume of 10 µl. After an initial denaturation step (95°C for 8 min), 50 cycles consisting of 95°C for 10 s, 60°C for 10 s, and 72°C for 6 s were performed. The copy numbers of HIV-1 cDNA was determined in reference to a standard curve prepared by amplification of quantities ranging from 5 x 103 to 5 x 106 copies of cloned DNA with matching sequences.
Confocal Microscopy
Cell stainings were performed 36 h after transfection or 7 d after infection. For intracellular staining, cells were fixed with 4% paraformaldehyde in phosphate-buffered saline (PBS) and permeabilized in permeabilizing buffer (PBS, 2% bovine serum albumin [BSA], and 0.1% Tween 20) for 20 min at room temperature. All subsequent incubations and washes were performed in permeabilizing buffer. Cells were stained using the following primary antibodies: anti-CAp24 rabbit serum (1/4000) for Gag immunolocalization, anti-gp120 110H mAb (1/1000) for Env, 2D11 mAb (1/20) for Dlg1, and anti-CD63 (1/1000), anti-CD82 (1/1000), or anti-LAMP2 mAb (1/1000) and then with goat anti-mouse or goat anti-rabbit antibodies conjugated to Alexa 488 (green), Alexa 594 (red), or cyanine 5 (far red). For cell surface staining, cells were fixed as described above but not permeabilized, and Env proteins were stained using the anti-gp120 antibody (1/1000) in PBS containing 2% BSA. Cells were mounted in Mowiol (Merk Eurolab, Pitiviers, France) and examined at 20–25°C. Images were obtained with a TCS SP2 AOBS confocal microscope (Leica, Rueil-Malmaison, France) by using a 63x objective. Images were analyzed using ImageJ software.
| RESULTS |
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15% of total cells) was confirmed by confocal microscopy (data not shown). Compared with control cells, similar amounts of CAp24 were found in MOLT-4 T cells expressing the Dlg1 shRNA in either T cell lysate (106 ± 8%) or supernatant (105 ± 16%) (Figure 1C). Similarly to the effect found in adherent cells (Figure 1B), Dlg1 knockdown significantly increased the infectivity of viruses produced by T cells (556 ± 211%, compared with 100% for control virions; Figure 1C).
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Collectively, our findings demonstrate that Dlg1 is a new important regulator of HIV-1 replication that is dispensable for Gag production and virus release but critical in determining particle infectivity.
Endogenous Dlg1 Associates with Gag but Not Env in HIV-1–infected T Cells
The impact of modulating Dlg1 levels in producer cells suggested that Dlg1 could be an interacting partner of HIV-1 structural proteins. We therefore investigated whether endogenous Dlg1 could be coprecipitated with HIV-1 Env or Gag proteins (Figure 2). Proteins from either noninfected or HIV-1-infected CEM T cells were immunoprecipitated with a control preimmune rabbit serum or a rabbit serum directed against the PDZ domains of Dlg1, and the proteins recovered were revealed using an anti-HIV-1 human serum. In the conditions used, this serum essentially detects Gag proteins, as shown by direct analysis of cell extracts from HIV-1–infected T cells (Figure 2A, lane 2). Immunoprecipitation with the anti-Dlg1 rabbit serum allowed the recovery of Pr55Gag in HIV-1–infected CEM T cells (lane 4) but not in noninfected CEM (lane 3). In contrast, no specific signal was found when cell extracts were immunoprecipitated with a control rabbit serum (Figure 2A, lanes 5 and 6). Importantly, similar Gag/Dlg1 coprecipitation was detected using another T cell line infected with a different HIV-1 strain (MOLT-NL4.3; Figure 2B).
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These analyses show that the endogenous form of Dlg1 associates with Gag, but not Env, in HIV-1–infected T cells. However, this robust Gag/Dlg1 interaction does not lead to Dlg1 incorporation into HIV-1 particles.
Pr55Gag Directly Interacts with Dlg1 through the NC Domain of Gag
To identify the Gag domain involved in Dlg1 binding, in vitro GST pull-down assays were performed using a GST-Dlg1 fusion protein and either full-length or truncated versions of Pr55Gag (Figure 4A, left). Equal amounts of radiolabeled Gag proteins (Figure 4A, right; see input in lanes 1, 4, and 7) were incubated with identical amounts of GST-Dlg1, allowing quantification of the proportion of Gag proteins pulled down by Dlg1. The full-length Pr55 Gag was pulled down by beads coupled to GST-Dlg1 but not GST alone, showing the specificity of the assay and more importantly, indicating that Dlg1 and Gag directly interact. Deletion of the SP2-p6 domains caused a 30% (Figure 4A, lane 6) reduction in Gag binding to Dlg1 compared with binding to full-length Gag taken as 100% (lane 3). The interaction was abolished by further deleting the SP1-NC sequences (Figure 4A, lane 9). The interaction of Dlg1 with various GST-Gag fusion proteins was also studied (Figure 4B). Similar amounts of each GST-Gag proteins were used (Figure 4B, bottom). No binding was found with GST (Figure 4B, lane 1), GST-CA (Figure 4B, lane 4), or GST-p6 (Figure 4B, lane 6). In contrast, radiolabeled Dlg1 was pulled down by the GST constructs fused to a Gag-
MA protein (Figure 4B, top, lane 3) or to the NC domain alone (Figure 4B, lane 5). Together, these results indicate that the NC domain of Gag is necessary and sufficient for the interaction with Dlg1.
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Finally, reciprocal GST-pull down assays were performed to identify the Gag binding domains of Dlg1, by using GST proteins fused to each domain of Dlg1 (Figure 4D, left). The same amounts of GST or GST-Dlg1 proteins (Figure 4D, right bottom) were incubated with in vitro translated radiolabeled Pr55Gag, and pulled down proteins were revealed by autoradiography (Figure 4D, right top). No Gag products were recovered with the GST control protein (Figure 4D, lane 2) or with the GST-Nter and GST-PDZ fusions (Figure 4D, lanes 4 and 5). In contrast, Pr55Gag was detected in reactions performed using the GST-Cter fusion, containing the Dlg1 SH3, I3, and GUK domains (lane 6). Both the GST-SH3 and GST-I3 fusion proteins pulled down Gag (Figure 4D, lanes 7 and 8), whereas GST-GUK did not (Figure 4D, lane 9). These results indicate that Dlg1 and Gag directly interact through the NC domain of Gag and the SH3/I3 region of Dlg1 and that this interaction does not depend on the presence of nucleic acids.
Dlg1 Knockdown Does Not Influence gRNA Packaging but Enhances the Amount of Env in Producer Cells and Virions
Dlg1/Gag interaction could influence different assembly processes, including the packaging of gRNA and the recruitment of Env into virions. To discriminate between these two possibilities, viral proteins or gRNA were extracted from equal amounts of particles purified on a 25% sucrose cushion. To quantify gRNA copies, cDNA was first produced from virus-associated RNA using RT-PCR, in the presence of heterologous RNA for normalization (see Materials and Methods). The amplified cDNA was subjected to quantitative PCR using specific primers. Nonsignificant variations were found in the number of cDNA copies between particles obtained from control cells and cells treated with the Dlg1 siRNA (Figure 5A), ruling out a major effect of Dlg1 depletion on gRNA packaging.
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Finally, an experiment was performed in which Env was expressed independently on Gag using a
Gag/Pol LAI plasmid (pMA-243). Higher levels of gp160/gp120 as well as of gp41 were observed upon Dlg1 depletion (Figure 5D). These experiments show that Dlg1 knockdown has no effect on Gag production or gRNA packaging, whereas it enhances the level of Env in cells and in virions, through a Gag-independent mechanism.
Dlg1 Knockdown in T Cells Modulates Subcellular Distribution of Gag
Whether the interaction with Dlg1 modulates the subcellular localization of Gag in T cells was next studied by immunoconfocal laser microscopy (Figure 6). In either HIV-1–transfected MOLT-4 (Figure 6, top) or Jurkat (Figure 6, middle) T cells, Gag and Dlg1 were concentrated at the plasma membrane, where they partially colocalized (siCtl). Dlg1 was readily depleted in cells cotransfected with the LAI plasmid and the Dlg1 siRNA. Dlg1 knockdown was associated with a dramatic change in Gag localization because Gag was no more found as a homogenous stain at the plasma membrane but rather concentrated within seemingly intracellular dispersed dots (siDlg). The proportion of cells in which Gag was found at the plasma membrane was then determined in two independent experiments by counting at least 70 cells. Gag was located at the plasma membrane in approximately two thirds of control cells (75 and 71% for MOLT-4 and Jurkat T cells, respectively) and in only one third of Dlg1-depleted cells (25 and 34%, respectively).
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These experiments show that the absence of Dlg1 leads to the redistribution of Gag to dispersed punctuate structures and that this effect is restricted neither to a particular T cell line nor to a particular mode of HIV-1 production.
Dlg1 Knockdown Induces Accumulation of Gag and Env in CD63- and CD82-positive Compartments
Several studies have reported that HIV-1 virions can bud from various locations in T cells, including tetraspanin-enriched microdomains (TERM) (Nydegger et al., 2006
) and endosomes (Nydegger et al., 2003
; Grigorov et al., 2006
). Colocalization experiments were therefore performed between Gag, Env, and some markers of these compartments in HIV-1–infected CEM and CEM-shDlg T cells (Figure 7). In parental CEM T cells, CD63 was located in intracellular compartments as well as at the plasma membrane, and the latter population strongly colocalized with Gag (Figure 7A, top left). This is consistent with recent studies showing that a fraction of CD63 is delocalized to the plasma membrane in HIV-1–infected T cells (Jolly and Sattentau, 2007
). CD82 was essentially found at the plasma membrane where it strongly colocalized with Gag (Figure 7A, middle left). LAMP2, a lysosomal marker, was only found inside the cell and did not colocalize with Gag (Figure 7A, bottom left). In CEM-shDlg1 cells, Gag was redistributed into dispersed dots near the plasma membrane and in larger intracellular compartments, containing CD82 or CD63, but not LAMP2 (Figure 7A, right).
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Costaining of Gag and Env showed that Gag colocalized with the fraction of Env present at the plasma membrane in parental CEM T cells and that Gag and Env were redistributed to the same dispersed puncta in CEM-shDlg cells (Figure 8A). The effect of Dlg1 knockdown on Env transport to the plasma membrane was also investigated by performing staining on nonpermeabilized cells. Capping of Env at the cell surface was observed in parental CEM T cells (Figure 8B, left). In CEM-shDlg T cells Env proteins were dispersed in plasma membrane dots and/or as large round vesicle-like structures (Figure 8B, right). Counting of 50 cells showed that Env presented homogenous plasma membrane stain in 68% of CEM T cells and in only 23% of CEM-shDlg T cells. We noticed that Env distributions at the plasma membrane were very similar between nonpermeabilized or permeabilized CEM-shDlg cells. Therefore, some of the vesicular structures containing Env identified in permeabilized cells are still connected with the plasma membrane and may therefore correspond to plasma membrane invaginations.
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| DISCUSSION |
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Our conclusion that Dlg1 is a new binding partner of HIV-1 Gag is supported by data obtained both in vitro and in cells. Dlg1 directly interacts with Gag in vitro and the NC domain of Gag is necessary and sufficient for this interaction. The primary function of the NC domain is to promote encapsidation of the gRNA. However, our data show that Gag and Dlg1 interact in vitro independently of the presence of gRNA or cellular nucleic acids and that the level of Dlg1 in producer cells does not modulate gRNA encapsidation. This indicates that the NC domain of Gag also functions as docking site for cell proteins, independently on its RNA-packaging property. Gag binds to the C-terminal SH3 or/and I3 domains of Dlg1, with an apparent higher affinity for the I3 domain. Gag is therefore more likely to bind to the Dlg1 isoform that contains the I3 insert, which is the isoform targeted to the plasma membrane (McLaughlin et al., 2002
). This is consistent with our immunofluorescence studies showing that Gag and endogenous Dlg1 colocalize at the plasma membrane of HIV-1–infected T cells.
Importantly, our results also demonstrate that Gag and Dlg1 associate in cells, because complexes formed between Gag and endogenous Dlg1 could be retrieved from HIV-1–infected T cells. Hence, the interaction between endogenous Dlg1 and Gag is strong enough to be detected without overexpressing either protein, and it readily occurs in a major target cell population of HIV-1. The Dlg family contains other members, Dlg2 to Dlg7, which may also interact with Gag in T cells. However Dlg3 (SAP102/neuroendocrine-dlg) and Dlg7 are not expressed in T cells (Makino et al., 1997
; Gudmundsson et al., 2007
). Moreover, a very similar band pattern was observed in immunoblots performed on T cell lysates when using either the anti-PDZ antibody, which recognizes Dlg1 as well as other proteins of the Dlg family, or the Dlg1 specific antibody (data not shown). Finally, the specific knockdown of Dlg1 is sufficient to affect HIV-1 infectivity. This suggests that Dlg1 is the major Dlg member responsible for HIV-1 modulation in T cells.
From a functional point of view, despite binding to Gag, the level of Dlg1 has no effect on Gag synthesis, maturation, or release. This implies that Dlg1 is not required for Gag assembly into particles, consistent with our finding that Dlg1 is dispensable for gRNA packaging. In line with this conclusion, Dlg1 is not incorporated at detectable levels into progeny virions. However, our data clearly demonstrate that Dlg1 is a potent regulator of HIV-1 infectivity. Depleting Dlg1 enhances particle infectivity five to sixfold, whether particles originate from adherent cells or from T cells. Conversely, virions produced from cells overexpressing Dlg1 are 80% less infectious than control virions. The gain in virion infectivity found upon Dlg1 depletion correlates with higher amounts of Env in both producer cells and virions, providing a direct molecular explanation for the phenomenon observed.
How does Dlg1 level modulate the amount of Env? This effect was not dependent on the presence of Gag, which is consistent with the fact that Dlg1 knockdown has no impact of Gag production in producer cells. Dlg1 depletion could enhance transcription and/or translation of the Env mRNA. However, this seems unlikely because no change in the level of Gag was detected in the same conditions, indicating that Dlg1 depletion does not grossly influence the production or translation of HIV-1 mRNAs. Direct binding of Dlg1 to Env that would modify Env stability and/or Env trafficking in cells could also be ruled out, because we reported previously that the cytoplasmic tail of the HIV-1 TM (gp41) does not bind to Dlg1 (Blot et al., 2004
) and confirm here that neither gp160, gp120 nor gp41 form complexes with Dlg1 in cells. Hence, although Dlg1 binds to HTLV-1 Env, facilitating cell-to-cell viral transmission, it only binds to HIV-1 Gag, inhibiting HIV-1 virion infectivity. Giving that the biology of HTLV-1 and HIV-1 is so different, it is not surprising that Dlg1 may not play a similar role in the life cycle of these two retroviruses. Parallel studies of these two viruses using the same techniques is now needed to definitely clarify the role of Dlg1 in cell-to-cell and free virus transmission of HIV-1 or HTLV-1.
Our confocal microscopy analyses could provide another explanation for the effect of Dlg1 knockdown on Env. Indeed, Dlg1 depletion also modifies the subcellular distribution of Env. In parental CEM T cells that produce Dlg1 endogenously, Env occurs as a polarized and homogenous plasma membrane stain. In contrast, in CEM-shDlg T cells lacking Dlg1, Env becomes concentrated in dispersed puncta near the plasma membrane and in larger compartments that extend within cells. Those larger Env-positive compartments are enriched in CD82 and CD63 and in some cases in LAMP2, suggesting that they could correspond to endosomes. Remarkably, some Env-positive dispersed dots superposed or close to the plasma membrane could also be detected when Dlg1-depleted CEM T cells were stained without permeabilization. This suggests that at least some vesicle-like structures containing Env are continuous with the plasma membrane and therefore do not correspond to classical endosomes. These data indicate that Dlg1 depletion does not prevent Env from accessing the cell surface but rather induces Env concentration into plasma membrane invaginations and/or endosomes. It has been reported previously that HIV-1 Env proteins can remain stable for more than 16 h within regulated secretory vesicles of T cells (Miranda et al., 2002
). Similarly, Env concentration in the new compartments formed in Dlg1-depleted cells could lead to protein stabilization by diverting Env from degradation.
In addition to its effect on Env, Dlg1 also modulates the distribution of Gag. Indeed, in Dlg1-depleted T cells, Gag and Env colocalize in dispersed dots superposed or adjacent to the plasma membrane and/or in larger compartments and the two proteins colocalize with either CD82 or CD63 in these structures. Hence, absence of Dlg1 induces concentration of Gag and Env in new compartments that seem to correspond to tetraspanin-enriched plasma membrane invaginations and/or endosomes. The striking finding of this study is that these redistributions create a situation that clearly enhances particle infectivity. The identity of the cell sites where HIV-1 virions assemble or bud is still a matter of debate. The prevailing view proposes that budding occurs at the plasma membrane in T cells (Jouvenet et al., 2006
), and in endosomes in macrophages (Raposo et al., 2002
; Pelchen-Matthews et al., 2003
). In T cells, studies have reported that HIV-1 budding occurs at the plasma membrane, in TERM (Nydegger et al., 2006
; Jolly and Sattentau, 2007
) or in endosome-like domains (Booth et al., 2006
). However, other studies reported that HIV-1 virions can also be found in intracellular endosomal compartments in T cells (Nydegger et al., 2003
; Grigorov et al., 2006
). Moreover, recent reports described that in macrophages, HIV-1 particles accumulate in seemingly intracellular vacuolar structures that correspond rather to plasma membrane invaginations or internally sequestered plasma membrane domains. These domains are accessible for extracellular antibodies and are enriched in CD63 and CD82 (Deneka et al., 2007
; Welsch et al., 2007
). We describe here a situation in which the concentration of Gag and Env into apparently intracellular compartments containing CD63 and CD82, including structures labeled by extracellular antibodies, is associated with enhanced infectivity. We propose therefore that Dlg1 depletion favors the appearance of new cellular sites that could correspond to plasma membrane invaginations similar to those described in macrophages, the validation of this hypothesis requires future immunoelectron microscopy studies. Whatever their exact nature, our present data indicate that these sites function as specialized platforms that optimize the generation of infectious particles. Proteins of the ESCRT complexes have been shown to be distributed throughout the endocytic pathway, including the plasma membrane and tubular-vesicular endosomal membranes, in both T cells and macrophages (Welsch et al., 2006
). Hence, we speculate that the concentration of Gag and Env in these structures facilitate not only Gag/Env assembly but also their functional interactions with cellular proteins such as tetraspanins and budding cofactors. Furthermore, our data identify Dlg1 as a host cell factor that regulates the generation of these assembly platforms. Dlg1 is targeted to the inner face of the plasma membrane and is connected to the cytoskeleton (Kim et al., 1997
; Wu et al., 1998
). Dlg1 knockdown results in the disruption of the actin cytoskeleton in epithelial cells (Firestein and Rongo, 2001
) and in impaired antigen-induced actin polymerization in T cells (Round et al., 2005
). Remarkably, the formation of invaginations of the plasma membrane could be enhanced by disruption of the actin cytoskeleton (Itoh et al., 2005
, Tsujita et al., 2006
). These findings along with our data are consistent with a model in which, through disorganization of the actin cytoskeleton, Dlg1 knockdown facilitates the formation of intracellular extensions of the plasma membrane. Conversely, Dlg1 overexpression would either interfere with the formation of plasma membrane invaginations and/or, by virtue of its direct binding to Gag, prevent the targeting of Gag to these structures. This is consistent with the reduced infectivity observed in cells that overexpress Dlg1 and with the fact that Gag interacts with the Dlg1 isoform that is targeted to the plasma membrane. A surprising finding of our study is that Dlg1 modulation impacts virus infectivity but has no effect on the level of virus release. This emphasizes the notion that Gag assembly and release and the process of infectious particle formation are two related but not strictly overlapping phenomena that seem to be regulated by distinct host cell proteins. The exploration of the roles of Dlg1 in plasma membrane dynamics and the distribution of the HIV-1 structural proteins in T cells will constitute therefore a promising approach to elucidate the mechanisms governing the very late steps of the HIV-1 life cycle.
| ACKNOWLEDGMENTS |
|---|
| Footnotes |
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These authors contributed equally to this work. ![]()
Present address: || Department of Exploratory Biology, Pfizer Global Research and Development, La Jolla Laboratories, 10628 Science Center Dr., San Diego, CA 92121. ![]()
Address correspondence to: Claudine Pique (claudine.pique{at}inserm.fr)
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