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Vol. 20, Issue 8, 2132-2145, April 15, 2009
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Department of Molecular Genetics, Ohio State University, Columbus, OH 43210
Submitted October 21, 2008;
Revised January 13, 2009;
Accepted February 4, 2009
Monitoring Editor: Susan R. Wente
| ABSTRACT |
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| INTRODUCTION |
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There are three subregions of the nucleolus starting in the middle with the fibrillar center (FC) and moving outward to the dense fibrillar component (DFC) and then finally to the granular component (GC; Boisvert et al., 2007
). These subdomains of the nucleolus have been defined using electron microscopy (Jordan, 1991
; Leger-Silvestre et al., 1999
; Trumtel et al., 2000
) and are thought to functionally reflect the different stages of ribosome biogenesis (Shaw and Doonan, 2005
): rRNA transcription at the FC/DFC interface, pre-rRNA processing in the DFC, and ribosome subunit assembly in the GC.
During S. cerevisiae and Schizosaccharomyces pombe closed mitosis, the nucleolus and NOR remain associated and segregate later than bulk genomic DNA (Granot and Snyder, 1991
; Fuchs and Loidl, 2004
). In S. cerevisiae activation and regulated release of the Cdc14 phosphatase from the nucleolus plays a critical role in post-anaphase condensation of the NORs, which causes subsequent splitting and separation of the nucleolus to daughter nuclei (Strunnikov, 2005
; Wang et al., 2006
). Interestingly however, Robinow and Caten (1969)
saw that the nucleolus of the model filamentous fungus Aspergillus nidulans remained intact after DNA segregation and suggested that the nucleolus is not divided but perhaps becomes "budded off" during the mitotic process. More recent data utilizing expression of a BIMG-green fluorescent protein (GFP) fusion also indicates the nucleolus of A. nidulans might remain intact into late mitosis (Fox et al., 2002
). These data suggest that mitotic segregation of the nucleolus is significantly different between yeasts and filamentous fungi.
During open mitosis the nucleolus undergoes disassembly. This involves activation of cyclin-dependent kinase 1 (CDK1)-Cyclin B and phosphorylation of promoter selectivity factor SL1 components which prevents RNA polymerase I preinitiation complex formation and shuts down rDNA transcription (Heix et al., 1998
; Sirri et al., 2002
; Leung et al., 2004
). Shutdown of rDNA transcription has been linked to nucleolar disassembly (Leung et al., 2004
; Boisvert et al., 2007
). Disassembled nucleolar proteins have several mitotic locations including the surface of condensed chromosomes and cytoplasmic bodies of variable size and number termed nucleolar-derived foci (NDF). These NDF release their constituents during mitotic progression. Released NDF components associate with rRNA processing proteins on the surface of chromatin, forming structures termed prenucleolar bodies (PNB), which eventually form the new nucleolus in G1. However, not all nucleolar proteins disperse during mammalian mitosis. For instance, some Topo I remains at the NORs throughout mitosis (Christensen et al., 2002
).
In mammalian cells, postmitotic nucleolar reassembly requires association of RNA polymerase I transcription factors to the NOR (Dundr et al., 2000
; Dousset et al., 2000
; Leung et al., 2004
; Angelier et al., 2005
) and transcription of ribosomal DNA (Benavente et al., 1987
). Live cell imaging of different nucleolar rRNA processing proteins has shown a stepwise reassociation of proteins to the developing nucleoli. For example, fibrillarin locates to NORs before Nop52. The stepwise reassembly is thought to reflect the order of function during the biogenesis pathway of ribosome subunits (Savino et al., 1999
, 2001
) and, as mentioned above, this order of function is also reflected in the substructure of nucleoli. Sequential release from the PNB is thought to be the mechanistic basis for stepwise nucleolar reassembly (Savino et al., 2001
; Angelier et al., 2005
). However, what regulates the stepwise release–reassembly remains to be determined.
Although studies of A. nidulans nuclear envelope (NE) structure using electron microscopy reveal that the NE remains intact during mitosis (Robinow and Caten, 1969
; Oakley and Morris, 1983
), we have previously shown that A. nidulans undergoes partially open mitosis (De Souza et al., 2004
; Osmani et al., 2006a
) during which core structural nuclear pore complex (NPC) proteins (nucleoporins or Nups) remain at the NE, whereas peripheral Nups disperse throughout the cell. This stops regulated nuclear transport and allows proteins to equilibrate across the NE by diffusion through a minimal core NPC structure during mitosis. As mitosis is completed the core NPC structure acts as a seed for dispersed Nups to return and reestablish regulated nuclear transport (Osmani et al., 2006a
; De Souza and Osmani, 2007
). However, how two nuclei are generated from one or how the nucleolus is segregated during mitosis has not been defined.
| MATERIALS AND METHODS |
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For live cell imaging (De Souza et al., 2004
) conidiospores were germinated in minimal medium containing glucose as the carbon source and urea as the nitrogen source in 35-mm glass-bottom microwell dishes (MatTek, Ashland, MA). Cells were imaged using Orca-ER cameras (Hamamatsu, Bridgewater, NJ) on TE300 inverted microscopes (Nikon, Melville, NJ) configured with Ultraview spinning disk confocal systems (Perkin Elmer-Cetus, Norwalk, CT) controlled by Ultraview software (Perkin Elmer-Cetus) utilizing Nikon Plan Apo 60x NA 1.40 oil objectives. Narrow bandpass filters were used that eliminated any bleed-through during dual color imaging even with bright signals such as fibrillarin-GFP/chRFP. To generate movies, lower-limit thresholds were either set just below the cytoplasmic levels or the background levels adjacent to cells were subtracted digitally using Ultraview software. RGB images and movies were generated by merging the appropriate grayscale images using Ultraview software. All imaging was carried out at room temperature at which strains containing temperature-sensitive mutations behave normally. Where indicated, benomyl was used at a concentration of 2.4 µg/ml (Ovechkina et al., 2003
). Image analysis and kymograph generation was completed using ImageJ freeware (http://rsb.info.nih.gov/ij/). All images are represented as maximum intensity projections captured at 2 x 2 binning with the exception of data in Figure 3A in which images were collected at 0.2-µm intervals without binning. The z series stack was used to generate a 3D rendered volume using Slidebook (Intelligent Imaging Innovations, Denver, CO) and exported as a movie file. Views are as rotated around the y-axis.
| RESULTS |
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Nuclear transport, which can be followed in A. nidulans using an NLS-DsRed reporter construct (Suelmann et al., 1997
), is turned off upon entry into mitosis (because NPCs undergo partial disassembly), and nuclear NLS-DsRed is released into the cytoplasm at prophase before being reimported to daughter G1 nuclei as functional NPCs are reassembled. By following NLS-DsRed reimport during G1, we determined that the nuclear remnant is transport incompetent (Figure 1F). We have never seen NLS-DsRed locate to a third structure during mitosis (100s of mitoses), confirming the nuclear remnant to be transport incompetent.
Mitotic Segregation of the A. nidulans Nucleolus Involves Its Disassembly and Reassembly
The nucleolus, as defined using functional endogenously tagged nucleolar proteins resides in a subregion of the nucleus, offset from the nuclear center, abutting a region of the NE. Chromatin is largely excluded from the nucleolar region (Figure 2, B and C, merged G2 images). One early event in the mitotic segregation of the nucleolus is its transient stretching (Figure 2A, arrow). This stretching was rapid and was observed following not only An-Fib-GFP but also An-Bop1-GFP during rapid time-point acquisitions; see Figure 3B, arrows). Starting in mitosis and continuing into G1 (Figure 2A), parental levels of nucleolar An-Fib-GFP diminish, and a slight increase in the cytoplasmic levels occurs. During telophase and G1, two new An-Fib-GFP foci appear within newly generated daughter nuclei, while the diminishing parental nucleolus is still present (Figure 2, A and B, arrowheads). At the end of the process two daughter nucleoli are generated, presumably from protein that originated from the parental nucleolus. To determine if the mitotic behavior of An-Fib-GFP was unique and to define the relationship between nucleolar segregation and DNA segregation, endogenously tagged nucleolar proteins An-Fib, An-Bop1, An-Nrap1, and An-CgrA were followed together with histone H1-mRFP. Representative data for each is presented (Figure 2, B and C; Video2.mov). During DNA segregation nucleolar Fib-GFP becomes positioned between the separating chromosomes (Figure 2B). After DNA is segregated, new nucleoli start to appear in a discrete region within daughter nuclei. The expansion of daughter nucleoli corresponds with a concomitant decrease in the parental An-Fib-GFP signal (Figure 2B; Video2.mov). During G1 the parental An-Fib-GFP signal is eventually lost and all An-Fib-GFP is located within the smaller daughter nuclei (Figure 2, A and B). The pattern of segregation of An-Bop1-GFP, An-Nrap1-GFP, and An-CgrA-GFP, in relationship to DNA, was similar to that of An-Fib-GFP (Figure 2C). Interestingly, although the nucleolus is typically located to one side of the nucleus in late G2, as mitosis proceeds the parental nucleolus always became positioned between the separating daughter nuclei.
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Sequential Mitotic Disassembly–Reassembly of the Nucleolus
To test if mitotic An-Bop1 disassembled after An-Fib, we followed their segregation in the same cells. High-resolution imaging through the z-axis and volume rendering revealed that An-Fib-chRFP occupied a more central position within the nucleolus and was surrounded unevenly by An-Bop1-GFP (Figure 3A). This indicates that, as in other organisms, fibrillarin is likely a protein of the more central FC and DFC nucleolar regions and An-Bop1 a protein of the more peripheral GC in A. nidulans. During mitotic exit and after an initial stretching of both signals (Figure 3B, arrows), An-Fib-chRFP disassembled before An-Bop1-GFP (Figure 3B). Even as An-Fib-chRFP initially reassembled in daughter nucleoli (Figure 3B, arrowheads for An-Fib-chRFP), all of An-Bop1-GFP remained at the parental nucleolus. Only after An-Fib-chRFP almost completes its reassembly in daughter nuclei does An-Bop1-GFP begin to disassemble. An-Bop1-GFP then undergoes its cycle of disassembly–reassembly. This demonstrates that the disassembly and reassembly of An-Fib precedes that of An-Bop1 (Figure 3B) and that the nucleolus of A. nidulans undergoes both stepwise disassembly and stepwise reassembly (Video3.mov).
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To test when the NORs are removed from the nucleolus during mitosis, we followed the distribution of Topo I-GFP in relationship to An-Fib-chRFP. During anaphase, when the single dot of Topo I-GFP separates into two, the nucleolar An-Fib-chRFP becomes transiently extended in the direction of the NOR movements but remains between the two separated Topo I-GFP foci (Figure 4D, 6', arrowhead; Video4.mov). Thus, when the NORs segregate during mitosis, they are removed from the nucleolus, which is eventually excluded to the cytoplasm. As the cell cycle proceeds, the nucleolus then undergoes disassembly and subsequent reassembly occurs around the NORs within the daughter nuclei. An-Fib-chRFP integrates specifically at the Topo I-GFP foci to reform nucleoli (Figure 4D, G1). This phenomena was observed even when using rapid 7-s time-point delays to monitor Topo I foci and the earliest stages of nucleolar formation following fibrillarin (Supplemental Figure S1C). These data confirm the Topo I foci as the sites of mitotic NORs.
Nucleolar Segregation and the Spindle Assembly Checkpoint
To begin to understand how nucleolar segregation is regulated we wanted to determine if the process was influenced by the spindle assembly checkpoint (SAC) system. Treatment of cells with microtubule poisons, such as benomyl, does not prevent entry into mitosis but hinders anaphase due to lack of spindle function, which causes activation of the SAC and mitotic arrest (Musacchio and Salmon, 2007
). To follow mitosis and activation of the SAC, we monitored NLS-DsRed, which, as mentioned above, is released from nuclei at prophase and reimported during early G1. We have found that nuclear reimport of NLS-DsRed during exit from mitosis is under control of the SAC. Thus continued dispersal of NLS-DsRed from nuclei in the presence of benomyl indicates cells are in mitosis with the SAC engaged. On the other hand, nuclear reimport of NLS-DsRed, in the continued presence of benomyl, indicates the SAC is no longer engaged.
When cells enter mitosis in the presence of benomyl, NLS-DsRed is dispersed and remains dispersed for an extended period of time compared with the control (Figure 5A, WT) due to SAC activation (Figure 5A, + benomyl). During this mitotic arrest we consistently observed slight dispersal of An-Fib-GFP from the nucleolus into the cytoplasm. Notably however, all An-Bop1-GFP remained associated with the nucleolus at the SAC arrest point (cf. Figure 5B, WT, with Figure 5B, + benomyl). This indicates that disassembly of the nucleolus is influenced by the SAC with early stages of disassembly (shown by An-Fib) occurring during SAC activation, but later stages remaining arrested (shown by An-Bop1).
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(A. nidulans gene designation for the Mad2 orthologue is md2A, but for ease of understanding we will use mad2; Prigozhina et al., 2004
cells fail to arrest in mitosis, and NLS-DsRed is reimported. This indicates that the mad2
cells had transited mitosis even though, because of lack of spindle function, nuclear division cannot occur. This demonstrates the SAC is not functional when mad2 is deleted, as previously shown (Prigozhina et al., 2004
We next investigated what aspects of nucleolar segregation can occur in the absence of the mitotic spindle. As indicated by both An-Fib-GFP (Figure 5C; Video5.mov) and An-Bop1-GFP (Figure 5D; Video6.mov), mad2
cells treated with benomyl transit mitosis and complete a cycle of nucleolar disassembly and reassembly without nuclear division. In these experiments the temporal order of An-Fib reassembling to nucleoli before An-Bop1 was maintained (Figure 5, C and D). These experiments also reveal that a dynamic mitotic redistribution of the nucleolus occurs in the absence of the mitotic spindle. This phenomenon is clear from the kymographs and pixel profiles showing that the position at which the "new" nucleolus (designated n in Figure 5) is formed is distinct from the location of the "old" nucleolus (designated o). Notably, for both An-Fib and An-Bop1, the old and the new nucleolus can be seen in the same cell at several time points (Figure 5, C and D, asterisk). We will refer to the mitotic events that occur without spindle formation as Spindle Independent Mitosis or SIM.
To confirm that the above mitotic redistribution of nucleolar proteins occurs without spindle function, we followed mitosis with and without benomyl addition in mad2
cells containing GFP-tagged tubulin and An-Fib-chRFP (Figure 6). Without benomyl addition, nucleolar segregation occurred after anaphase spindle elongation (Figure 6A). This is similar to the mad2+ wild-type situation (data not shown). After addition of benomyl and microtubule disassembly, soluble GFP-tubulin was excluded from interphase nuclei as previously demonstrated (Ovechkina et al., 2003
; Figure 6B). On mitotic entry, tubulin entered nuclei. After a delay tubulin was reexcluded as cells exit mitosis (because of lack of the SAC), and nuclei resume regulated nuclear transport. At no time during SIM was spindle formation apparent. However An-Fib clearly underwent a round of disassembly from one location and reassembly at a different location (Figure 6B; asterisk indicates a time point at which the old and new nucleolus is present), confirming that mitotic redistribution of the nucleolus can occur without spindle formation.
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Our data suggest that the NOR can be removed from the nucleolus in a spindle-independent manner. To test this, we followed An-Topo I location in relationship with An-Fib-chRFP during SIM (Figure 7B; Video7.mov). Before the transition out of mitosis, the NOR (An-Topo I-GFP) partially colocalizes within the old nucleolus (An-Fib-chRFP), resulting in a yellow color (Figure 7B, 0–4 min). As cells exit mitosis separation between the old nucleolus (An-Fib-chRFP, now clearly red) and the NOR (An-Topo I-GFP, now clearly green) occurs beginning at 5 min (Figure 7B). After separation of the NOR from the old nucleolus has occurred, An-Fib-chRFP disassembles from the old nucleolus and reassembles around the separated NOR to form the new nucleolus, their resulting colocalization once again giving a yellow color. This demonstrates that the nucleolus and NOR can be separated in the absence of spindle function or disassembly of nucleolar proteins.
Peripheral Nups such as An-Nup49 disperse from NPCs at mitosis and return to the NE surrounding the daughter nuclei to reestablish nuclear transport in G1 nuclei (e.g., Figure 1, B, C, and F; De Souza et al., 2004
). If the nucleolus is indeed expelled from the nucleus during SIM, the return of An-Nup49 to the postmitotic NE should be informative. For instance, if mitotically dispersed An-Nup49 does not return around the old nucleolus, but does return to the rest of the nuclear periphery, this would demonstrate the old nucleolus had been partitioned into the cytoplasm. In G2, An-Nup49-chRFP surrounds the nucleus including the nucleolar An-Bop1-GFP (Figure 8A, time 0). As cells enter SIM, An-Nup49-chRFP disperses from the NE as expected. Importantly, upon SIM exit An-Nup49-chRFP returns to the NE but fails to locate around the nucleolus (Figure 8A, 6'; Video8.mov). As exit from mitosis continues, An-Bop1-GFP disperses from the old cytoplasmic nucleolus and is imported into the new nucleus defined by An-Nup49-chRFP. The exclusion of the old nucleolus from the new nucleus can clearly be seen in the kymograph and pixel profile representations of the time course (Figure 8A).
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| DISCUSSION |
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Double Restriction and Fission of the NE during Mitosis
Chromatin condensation and segregation of DNA to daughter nuclei on the mitotic spindle are universal aspects of mitosis. However, there is considerable variation in the mitotic behavior of the NE and the mechanisms by which two nuclei are generated from one. During closed mitoses, the NE remains intact, and two nuclei are generated via a restriction and fission of the NE between segregated DNA. How this is achieved or regulated is currently unknown, although in S. cerevisiae cytokinesis plays a nonessential role (Lippincott and Li, 2000
). During open mitosis, the NE is disassembled in a process in part involving mechanical tearing of the NE followed by its disassembly (Rabut et al., 2004
). New nuclei are generated by reassembly of the NE around segregated DNA. Although mechanistically very distinct, in both open and closed mitoses the location of DNA provides the spatial information dictating generation of daughter nuclei.
In A. nidulans the mitotic NE behaves in a manner not typical of closed or open mitosis but shares aspects of both (Figure 9). Generation of daughter nuclei involves NE restriction and fission, as in closed mitosis, but two restrictions are involved instead of one, resulting in three NE defined structures, not two. The third central postmitotic structure contains the nucleolus associated with a modified NE. Marked differences exist between the NE of the daughter nuclei and the nucleolus. For instance, nuclear transport is reestablished only in daughter nuclei. This is achieved by the reestablishment of functional NPCs in the NE of the daughter nuclei but not the nuclear remnant. The basis for this and its regulation is unknown but is of great interest and presumably involves spatial information provided by segregated DNA.
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During A. nidulans mitosis partial disassembly of NPCs opens the central NPC channels, allowing rapid nuclear location of tubulin and other proteins required for the quick
5-min mitoses (Ovechkina et al., 2003
; De Souza and Osmani, 2007
). As multiple nuclei undergo synchronous mitoses in a common cytoplasm, the remaining NE protects kinetochores of individual nuclei from interference from spindles of other nuclei. This provides an explanation for why A. nidulans opens its NPCs but does not undergo completely open mitoses. However, because the mitotic NE is permeable, the nucleoplasm and cytoplasm mingle, contaminating the nucleolus with cytoplasmic components. This is similar to higher eukaryotes, which then excludes cytoplasmic components from daughter nuclei by rebuilding the NE from the surface of chromatin. To fulfill a similar requirement, we suggest the nucleolus in A. nidulans is expelled to the cytoplasm and forced to undergo a round of disassembly before nuclear import and reassembly. In this manner the nucleolus will be cleansed of cytoplasmic contaminates. Earlier cytological studies of fixed cells (Heath, 1980
) indicate that many other fungi and protists might segregate their nucleoli via a cytoplasmic intermediate, indicating this pattern of nucleolar segregation will not be unique to A. nidulans.
Uncoupling Spindle-dependent and Spindle-independent Mitotic Mechanisms
The key events in the normal cycle of nucleolar segregation in A. nidulans are removal of the NORs from the parental nucleolus and functional changes in the NE, promoting expulsion of the nucleolus to the cytoplasm (Figure 9, Mitosis). Quite remarkably both of these events can occur in the absence of a mitotic spindle (Figure 9, SIM). We suggest the prime function of the spindle during nucleolar segregation is to segregate DNA, and thus the NORs, to two different locations to provide spatial cues for the generation of separated daughter nuclei and nucleoli. However, without spindle function, the process that separates the nucleolus from DNA, and drives it to the cytoplasm, still occurs. The only difference regarding the nucleolus between normal mitosis and SIM is that daughter NOR separation cannot occur during SIM. Thus A. nidulans mitosis consists of two parallel, but independent, processes that are normally coupled to orchestrate successful segregation of DNA and the nucleolus. The nature of the nucleolar segregation mechanisms remains to be determined, but our data suggest that the NE, along with associated proteins, is likely to play a key role and could perhaps provide the mechanical forces required to separate the NOR from the nucleolus and expel the nucleolus into the cytoplasm. The molecular nature of these mitotic forces, and how they are regulated, could be related to ancient membrane based cell divisions that occur in organisms lacking mitotic spindles (Heath, 1980
). However, it is possible that the nucleolar cycle may be driven by movement mediated through other non–tubulin-based mitotic structures, such as the spindle matrix for instance (Johansen and Johansen, 2007
).
Regulation of Nucleolar Disassembly–Reassembly
Our current understanding of the regulation of mitotic nucleolar segregation in higher eukaryotes is at an early stage (Boisvert et al., 2007
). Mitotic phosphorylation of the rDNA transcription machinery results in shutdown of rDNA transcription and may initiate nucleolar disassembly (Leung et al., 2004
; Boisvert et al., 2007
). We find that nucleolar structure does not require ongoing NOR transcription and that surprisingly a nucleolus can exist in the cytoplasm in the absence of NORs. The disassembly of the nucleolus is likely a regulated process in A. nidulans, controlled by regulatory systems unique to organisms that disassemble their nucleoli during mitosis. Our data suggest the SAC might play a role, yet other regulatory mechanisms are also likely to be involved. It will be interesting to define the nature of the forces driving separation of the nucleolus from the NOR and how this is normally regulated and integrated with spindle driven aspects of mitosis and with NE restructuring.
Note added in proof. The late mitotic behavior of the NE and nucleolus described in this work must be highly regulated and integrated with other aspects of mitosis. In an accompanying paper on p. 2146 of this issue of Mol. Biol. Cell (De Souza et al., 2009), we demonstrate that several mitotic regulators transiently localize in between daughter nuclei in the vicinity of the cytoplasmic nucleolus. We speculate that such localization of mitotic regulators could be important to coordinate the post mitotic disassembly-reassembly of the nucleolus.
| ACKNOWLEDGMENTS |
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| Footnotes |
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* Present address: Genome Institute of Singapore, 60 Biopolis Street, 02-01, Genome, Singapore 138672. ![]()
Address correspondence to: Stephen A. Osmani (osmani.2{at}osu.edu)
Abbreviations used: DFC, dense fibrillar component; FC, fibrillar center; GC, granular component; NE, nuclear envelope; NORs, nucleolar organizing regions; NPC, nuclear pore complex; rRNA, ribosomal RNA; SAC, spindle assembly checkpoint; SIM, spindle independent mitosis.
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