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Vol. 9, Issue 2, 301-309, February 1998
Friedrich Miescher-Institut, CH-4002 Basel, Switzerland
Submitted October 9, 1997; Accepted November 13, 1997| |
ABSTRACT |
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C2-
-Mannosyltryptophan was discovered in human RNase
2, an enzyme that occurs in eosinophils and is involved in host
defense. It represents a novel way of attaching carbohydrate to a
protein in addition to the well-known N- and
O-glycosylations. The reaction is specific, as in RNase
2 Trp-7, but never Trp-10, which is modified. In this article, we
address which structural features provide the specificity of the
reaction. Expression of chimeras of RNase 2 and nonglycosylated RNase 4 and deletion mutants in HEK293 cells identified residues 1-13 to be
sufficient for C-mannosylation. Site-directed mutagenesis revealed the
sequence Trp-x-x-Trp, in which the first Trp becomes mannosylated, as
the specificity determinant. The Trp residue at position +3 can be
replaced by Phe, which reduces the efficiency of the reaction
threefold. Interpretation of the data in the context of the
three-dimensional structure of RNase 2 strongly suggests that the
primary, rather than the tertiary, structure forms the determinant. The
sequence motif occurs in 336 mammalian proteins currently present in
protein databases. Two of these proteins were analyzed protein
chemically, which showed partial C-glycosylation of recombinant human
interleukin 12. The frequent occurrence of the protein recognition
motif suggests that C-glycosides could be part of the structure of more
proteins than assumed so far.
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INTRODUCTION |
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Recently, a new type of protein glycosylation was discovered: the
attachment of an
-mannopyranosyl residue to the indole C2 of
tryptophan via a C-C link (Hofsteenge et al., 1994
; de Beer et al., 1995
). This type of linkage is fundamentally
different from the ones occurring in protein N- and
O-glycosylation. C-mannosylation was originally observed in
human ribonuclease (RNase 2) from urine (Hofsteenge et al.,
1994
). Subsequent studies have shown that Trp-7 in RNase 2 from
cellular sources is also C-mannosylated (Löffler et
al., 1996
; Krieg et al., 1997
). The modification reaction in RNase 2 is specific, since Trp-7, but never Trp-10, is
modified. The polypeptide chain of RNase 2 comprises 134 residues containing 5 N-linked glycans (Beintema et al.,
1988
). Its amino acid sequence is identical to that of
eosinophil-derived neurotoxin (Rosenberg et al., 1989
),
which causes the Gordon phenomenon when injected into the cerebellum.
This toxicity manifests itself in muscle stiffness, ataxia, and loss of
Purkinje cells (Gordon, 1933
; Durack et al., 1979
; Durack
et al., 1981
). The three-dimensional structure of the
recombinant protein from Escherichia coli has been
determined (Mosimann et al., 1996
). The overall fold is
related to that of bovine pancreatic RNase A, but two regions close to the site of C-mannosylation are different: 1) the N terminus
(K-P-P-Q-F-), which forms a type I
-turn that contacts Trp-7; and 2)
the large insertion loop (residues 115-123), which packs closely
against the N terminus and affects its conformation (Mosimann et
al., 1996
).
Little is known about the biosynthetic aspects of C-mannosylation. It
takes place intracellularly and can be performed by a variety of
mammalian cells in culture. In contrast, cells from insects, plant
protoplasts, and E. coli do not C-mannosylate recombinant RNase 2 (Krieg et al., 1997
). Two major questions are
apparent: What are the structural features of RNase 2 that determine
the specificity of the reaction? What is the pathway of biosynthesis of
(C2-Man-)Trp? Moreover, no experimental evidence exists
that shows this reaction to be enzyme catalyzed. RNase 2 is the only
example of a C-mannosylated protein so far. Nevertheless, indirect
evidence strongly suggests that other proteins carrying this
modification exist (Krieg et al., 1997
). The search for such
proteins would greatly profit from the elucidation of the structural
determinant for C-mannosylation.
In this article, we report on the structural features required for the
C-mannosylation of Trp-7 in human RNase 2. Toward that aim, recombinant
chimeric RNases, consisting of the 17 N-terminal amino acids of human
RNase 2 and porcine RNase 4 as well as deletion mutants were analyzed
for (C2-Man-)Trp. The exact recognition sequence was
determined by site-directed mutagenesis of individual amino acids. The
accompanying article (Doucey et al., 1998
) addresses the
question of the sugar precursors involved in C-mannosylation and the
detection of a C-mannosyltransferase. In addition, it confirms the
structural determinant found in our research using an in vitro
C-mannosylation system and synthetic peptides.
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MATERIALS AND METHODS |
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Taq DNA polymerase, EcoRI, BglII, BamHI, and thermolysin were obtained from Boehringer Mannheim (Mannheim, Germany). Elastase was obtained from Worthington (Freehold, NJ), and endoproteinase Glu-C was purchased from Promega (Madison, WI). The QIAquick Gel Extraction kit was obtained from Qiagen (Hilden, Germany). The C4 and C8 reversed-phase columns were obtained from Vydac (Hesperia, CA). The Sepharose Q and CH-activated Sepharose were purchased from Pharmacia (Uppsala, Sweden). Cell culture media, fetal calf serum, and Lipofectamine reagent were obtained from Life Technologies (Gaithersburg, MD). ECL Western blot analysis reagents were obtained from Amersham Corp. (Arlington Heights, IL).
Antibodies
RNase 2,
RNase 4, and
-(5-10) were made in rabbits
and affinity purified as described (Löffler et al.,
1996
; Krieg et al., 1997
).
Construction of Hybrid RNases, SLHV-deleted RNase 2, and Introduction of Point Mutations
To construct the two hybrid RNases, RNase 2.4 and RNase 2 + 4, to introduce the deletion of the four-amino acid sequence SLHV in RNase
2 and the deletion of the nine-amino acid sequence SLHVKPPQF in RNase
2.4, site-directed mutagenesis by overlap extension polymerase chain
reaction (PCR) was used as described in Ho et al. (1989)
. The purified PCR-amplified products were trimmed at the 5
and 3
end
with EcoRI and BamHI and either ligated into
pBluescript vector SK (
) or directly into the expression vector pSMC
(Bergwerff et al., 1993
). By the same PCR method, residues
1-13 were individually mutated into Ala using the cDNA of RNase 2.4 or
RNase 2 as template. Ala-8 was converted into Thr. Because the Ala
mutant of Phe-11 was not secreted into the medium, a Leu residue was
introduced at this position. The final coding sequence of all
constructs was verified by dideoxy sequencing (Sanger et
al., 1977
).
Cell Culture, Transfection, and Purification of Recombinant RNases
HEK 293 (ATCC CRL 1573) and NIH3T3 (ATCC CCL 92) were cultured
and transfected as described (Krieg et al., 1997
).
Conditioned medium was collected 3 d after transfection and
cleared from remaining cells by centrifugation. The medium was passed
over a Sepharose Q column equilibrated in 20 mM Tris-HCl (pH 7.5). The
recombinant RNase appeared in the flow through and was purified by
immunoaffinity chromatography as described previously (Krieg et
al., 1997
). For the hybrid RNases 2.4 and 2 + 4, an
RNase 4 antibody column was used, whereas
SLHV-RNase 2 and point-mutated
RNase 2 were isolated by using an
RNase 2 antibody column. Fractions
containing recombinant RNase were made 0.1% in trifluoroacetic acid
(TFA) and fractionated by reversed-phase high performance liquid
chromatography (HPLC) using a 1-mm diameter C4 column
equilibrated in 0.1% TFA in water (solvent A). A linear gradient of
0-80% solvent B (70% CH3CN, 0.085% TFA) over 75 min was
used to separate the proteins at a flow rate of 0.05 ml/min. Fractions
containing RNase were identified by Western blot analysis and pooled.
Protein Chemical and Enzymatic Analysis
For digestion with endoproteinase Glu-C, 5 µg of a particular
RNase were lyophilized and dissolved in 5 ml of 0.5 M Tris-HCl (pH 8.6)
containing 6 M guanidinium-HCl and 0.2% EDTA. To reduce the protein, 1 ml of 0.5 M dithiothreitol in the same buffer was added, and the
solution was incubated for 3 h at 37°C in an argon atmosphere.
After cooling to room temperature, 2 ml of 0.55 M iodoacetamide were
added to carboxymethylate the protein for 0.5 h in the dark. The
mixture was diluted with 120 ml of HEPES-NaOH (pH 7.5) and digested
with 0.5 mg of endoproteinase Glu-C overnight at 37°C. Peptides were
fractionated and analyzed by liquid chromatography interfaced with
electrospray mass spectrometry (LC-ESI-MS) using a Rheos 4000 chromatograph equipped with a 1-mm diameter C8 column and
interfaced with a Sciex API 3000 mass spectrometer operating in the
multi-ion monitoring mode. The column was equilibrated in 95% solvent
A (2% CH3CN, 0.05% TFA), 5% solvent B (80%
CH3CN, 0.045% TFA), and a linear gradient was developed
from 5 to 40% solvent B in 60 min at a flow rate of 0.05 ml/min. The
percentage of modification of a particular RNase was calculated from
the ratio of the peak areas of the modified and unmodified peptide
4
to 12. A calibration curve was obtained by digesting and fractionating mixtures containing different ratios of fully C-mannosylated RNase 2/urine and fully unmodified recombinant RNase 2/E. coli.
Digestion of the fragment
4 to 12 with elastase (50 ng) was performed
in 10 ml of 50 mM NH4HCO3 (pH 8.0). The
peptides were fractionated and analyzed as described above but using a
gradient of 5-50% buffer B in 20 min. In the case of mutant RNase 2.4 E12A, quantitation of the degree of modification was performed after
thermolytic digestion as described (Krieg et al., 1997
).
Thermolysin digestion, SDS-PAGE, and Western blotting were performed as
described (Löffler et al., 1996
). Solid-phase Edman degradation (Pisano et al., 1993
) and nanospray
ESIMSMS1 (Wilm and Mann, 1996
) were performed according to
published methods. RNase activity and concentration were determined as
described (Vicentini et al., 1994
).
Database Searches
The Swiss-Prot (release 34.0) and SP-TrEMBL (release 4.0)
databases were searched for mammalian proteins containing the
recognition motif W-x-x-W using the program FindPatterns (Genetics
Computer Group, Madison, WI). To search for proteins that cross over
the endoplasmic reticulum membrane (Doucey et al., 1998
),
the annotation section of the results was searched with the queries
"signal" or "(trans)membrane," or "precursor,"
using the program StringSearch (Genetics Computer Group). The results
were inspected manually, one organism was selected in the case of
orthologous gene products and false-positives were removed.
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RESULTS |
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C-Mannosylation Does Not Require Entire RNase 2 Molecule
To examine the structural requirements for the specific C-mannosylation of Trp-7 in human RNase 2, a hybrid RNase was constructed in which the signal sequence and the first 17 residues of human RNase 2 were fused to residues 11-119 of porcine RNase 4 (Figure 1A). This RNase is 31% identical to RNase 2 but is not C-mannosylated (Figure 1B). In the RNase 2.4 hybrid, the amino acid sequence following the C-mannosylation site has been changed. Importantly, the insertion loop comprising amino acids 115-125, which in RNase 2 packs closely against the N terminus, is missing. Furthermore, as RNase 4 does not contain N-glycosylation sites in contrast to RNase 2, examination of the hybrid RNase also addresses the question whether N-glycosylation is required for C-mannosylation.
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The RNase 2.4 molecule was expressed in HEK 293 cells, which previously
have been shown to specifically C-mannosylate Trp-7 in human
recombinant RNase 2 (Krieg et al., 1997
). The secreted protein was purified from the cell culture medium by a three-step purification procedure using reversed-phase HPLC as the last step. RNase 2.4 eluted from the C4 column in two distinct peaks
(Figure 2). The later eluting protein had
a mass of 14,515 Da, in agreement with the calculated value for
unmodified RNase 2.4, whereas the earlier eluting protein was 162 Da
heavier, corresponding to the addition of a hexosyl residue. In Western
blot analysis, an
RNase 4-specific antibody bound to the protein in
both peaks, whereas the
(5-10) antibody, which specifically
recognizes the C-mannosylated form of RNase 2 (Krieg et al.,
1997
), bound strongly only to the earlier eluting protein. Edman
degradation revealed that both proteins start with the sequence SLHV-
(position
4 to
1; Figure 1), but only the early eluting one
contained (C2-Man-)Trp at position 7. These results
demonstrated that RNase 2.4 was partially C-mannosylated at Trp-7 and
that the modified and unmodified proteins could be separated by
reversed-phase HPLC. In this context, it should be noted that the minor
shoulders of the peaks contained RNase 2.4 from which the C-terminal
Lys had been cleaved. The C-terminal peptide produced by cleavage with endoproteinase Glu-C at Glu-116 had a mass of 1110 instead of 1238 Da,
as revealed by LC-ESIMS analysis. The chemical characterization of the
total pool of RNase 2.4 is described below along with that of its
mutants.
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To determine whether RNase 2.4 had properly folded, its catalytic
properties were examined. The hybrid cleaved yeast RNA at the same rate
(
A260/ng/ml/min = 1.7 × 10
3) as recombinant porcine native RNase 4 from E. coli (
A260/ng/ml/min = 1.6 × 10
3). Also, the second-order rate constants for the
cleavage of uridylyl(3
, 5
)adenosine were virtually indistinguishable,
2.6 × 105 M
1s
1 and
2.9 × 105 M
1s
1,
respectively.
Residues 1-13 Are Sufficient for C-Mannosylation
Alignment of the sequences of RNase 2.4 and RNase 2 revealed that
the two enzymes have, in addition to the 17 N-terminal residues, the
same amino acid at several positions scattered throughout the entire
length of the polypeptide chain (Figure 1B). To examine whether these
amino acids are required for the C-mannosylation of Trp-7, the hybrid
RNase 2 + 4 was constructed by fusing the signal peptide and the first
17 amino acids of RNase 2 to the N terminus of RNase 4 (Figure 1).
RNase 2, RNase 2.4, and RNase 2 + 4 are only colinear for the first 17 residues. RNase 2 + 4 was transiently expressed in HEK 293 cells and
the protein was isolated as outlined above. Western blot analysis using
the
(5-10) antibody showed that the RNase 2 + 4 protein is
C-mannosylated. In agreement with this, the peptide
4 to 12 generated
by digestion with endoproteinase Glu-C had a mass of 2162 Da, as
determined by LC-ESIMS. Quantitation of the degree of modification was
hampered by the fact that almost half of the protein was
proteolytically processed and started at position 8, as determined by
Edman degradation. The remaining material started with the sequence
SLHV and was C-mannosylated at Trp-7 for 89%. The results obtained
with RNases 2.4 and 2 + 4 allow the conclusion that the information for
C-mannosylation of Trp-7 lies within residues
4 to 13 of RNase 2.
RNase 2 contains a signal sequence for secretion with an unusual
C-terminal sequence: SLHV. In nature, both the form with and without
this sequence occur and are C-mannosylated (Löffler et
al., 1996
). Since it is not known when and where the processing of
this four-amino acid sequence occurs, it was possible that it is
required for the C-mannosylation of Trp-7. To address this possibility,
the four amino acids were deleted in RNase 2 and the protein was
expressed in NIH 3T3 cells. In Western blot analysis, purified
SLHV-RNase 2 protein bound to the
(5-10) antibody, indicating
that Trp-7 is modified. Thermolytic digestion and separation of the
modified and unmodified peptides by C18 reversed-phase HPLC
showed that 79% of the
SLHV-RNase 2 is C-mannosylated at Trp-7
compared with 81% in native RNase 2 (Figure 5B). Thus, the information
for C-mannosylation of Trp-7 must be contained within residues 1-13 of
RNase 2.
C-Mannosylation of Trp-7 in RNase 2.4 Is Abolished by Mutation of Trp-10 to Ala
Residues 1-13 of RNase 2.4 were mutated individually into Ala (except for Ala-8 and Phe-11, which were mutated into Thr and Leu, respectively) to find out which ones are required for the C-mannosylation of Trp-7. The mutated proteins were expressed in HEK 293 cells and purified as described above. Hybrid RNase 2.4 rather than RNase 2 was used for this analysis to simplify the purification by HPLC. RNase 2 yielded multiple peaks due to heterogeneity in N-glycosylation, whereas RNase 2.4 gave a much simpler pattern. The purity of all mutant proteins was found to be at least 90% by analyzing them on SDS-polyacrylamide gels and scanning of the silver-stained gels. Furthermore, all mutant RNases were catalytically active against yeast RNA, indicating that the enzymes were properly folded.
Western blot analysis with
(5-10) antibody revealed that,
with the exception of the W10A mutant, all mutants are C-mannosylated (Figure 3), although the mutant Q9A gave
a weak signal. To ensure that comparable amounts of protein were
loaded, the blots were stripped and reprobed with an
RNase 4 antibody. The degree of C-mannosylation of wild-type RNase 2.4 and each
of the mutants, as well as the specificity of the reaction for Trp-7,
were determined by peptide mapping using LC-ESIMS. Cleavage with
endoproteinase Glu-C yielded two peptides from the region
4 to 12. The results for wild-type RNase 2.4 and a representative example of a
mutant (T6A) are shown in Figure 4A
(upper and middle panels). The molecular masses of the two fragments
readily distinguished them as mannosylated (Figure 4A, m) and
unmodified (Figure 4A, "u"). This demonstrated that RNase 2.4 was
partially modified, which agrees with the results in Figure 2. The
mutant W10A was the only one that yielded a single peptide
4 to 12. Its molecular mass (1885 Da; Figure 4C) showed it not to be
mannosylated, which is in agreement with the lack of binding of
(5-10) antibodies to the entire protein (Figure 3). No evidence for
the presence of modified peptide could be obtained by extraction of the
MS data. The stoichiometry of C-mannosylation of the various RNase 2.4s
was calculated from the ratio of the modified and unmodified fragments
using a (linear) calibration curve obtained by digestion of mixtures of
fully modified RNase 2/urine and fully unmodified RNase 2/E.
coli. Compared with wild-type RNase 2.4, which is 58% modified,
nearly all mutants showed an increase in modification of Trp-7, which
varied from 62% for the mutant T13A up to 89% for the mutant Q9A
(Figure 5A). Only the W10A mutation
abolished the C-mannosylation of Trp-7 (Figure 5A).
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To ensure that the specificity for Trp-7 had not changed due to a
particular mutation, the modified peptides
4 to 12 were digested with
elastase and fractionated by LC-ESIMS. As a representative example, the
results for the mutant T6A are presented in Figure 4B. The early
eluting peptide (608 Da) comprised residues 9-12, with unmodified
Trp-10, whereas the second one (1542 Da) contained residues
4 to 8 with mannosylated Trp-7. These assignments were confirmed by nanospray
ESIMSMS analysis. The analysis was performed for all mutants, and in
each case it was found that Trp-7, but never Trp-10, was modified.
These results were confirmed by solid-phase Edman degradation of the
intact proteins. This approach could not be applied to RNase 2.4 containing the E12A mutation, since it eliminated the cleavage site. In
this case, the quantitation was obtained from a thermolytic peptide map
(Krieg et al., 1997
), and the specificity was established by
Edman degradation only. Likewise, because elastase cleaves after Ala-8,
the specificity of the reaction with the A8T mutant was verified by
ESIMSMS analysis of the peptide
4 to 12.
In addition to the single mutations, the mutant
(
4 to 5)RNase 2.4, in which the residues forming the type I
-turn of RNase 2 were
removed, was analyzed. In this protein Trp was modified for 93%
(Figure 5A).
C-Mannosylation of Trp-7 in RNase 2 Is Abolished by Mutation of Trp-10 to Ala But Can Be Partially Rescued by Phe
Because RNase 2.4 is an artificial, albeit enzymatically fully active, enzyme, it was important to verify the effect of some of the mutations in the context of RNase 2. The W10A mutation and two mutations which led to increased C-mannosylation of Trp-7 in RNase 2.4 were also introduced into RNase 2. In addition, the ability of other aromatic or hydrophobic amino acids to function as a signal was examined by the mutations W10F, W10Y, and W10L. The mutated RNase 2s were purified from the conditioned medium of transfected HEK 293 cells and analyzed as described above. In this cell line, wild-type RNase 2 is modified to 73%. An increase in C-mannosylation caused by the K1A and F5A mutations was also found in the RNase 2 context (Figure 5B) with a degree of modification of 84 and 88%, respectively. The substitution of Trp-10 by Ala again abolished the C-mannosylation of Trp-7, whereas replacement of Trp-10 by a Tyr or Leu residue reduced the efficiency of mannosylation to 6%, compared with 23% when Phe was introduced (Figure 5B).
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DISCUSSION |
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The results presented here demonstrate that the structural
information for the specific C-mannosylation of Trp-7 in human RNase 2 is located within the region 6-13 and consists of the sequence
Trp-x-x-Trp (mannosylated residue in bold). The evidence
relies on the observation that RNase 2.4, RNase 2 + 4,
SLHV-RNase 2 and
(
4 to 5) RNase 2.4 (Figure 1) all were C-mannosylated and that
their sequences are only colinear for residues 6-13. This excludes
that structural features such as the large insertion loop 115-123,
which packs against the N terminus, is crucial for C-mannosylation.
Furthermore, since RNase 2.4 does not contain N-glycosylation sites, it can be concluded that
C-mannosylation does not require prior N-glycosylation. The
identification of exact residues required for recognition is based on
mutation of each of the residues in the region 1-13 in RNase 2.4 (Figure 5A). Although RNase 2.4 is an artificial protein, it was
secreted by the cells in a fully active form, with kinetic parameters
indistinguishable from those of RNase 4. This shows that the catalytic
center, and most likely the entire molecule was properly folded, making
RNase 2.4 a suitable model system. The purified proteins were
examined for C-mannosylation using Western blot analysis (Figure 3),
Edman degradation, and LC-ESIMS of peptides obtained with thermolysin, endoproteinase Glu-C and elastase (Figure 4). This allowed the quantitation of the degree of C-mannosylation and the unambiguous assignment of the position of modification. Because the W10A mutation was the only one that abolished C-mannosylation, we conclude that a Trp
residue at position +3 forms the signal for C-mannosylation of Trp-7.
This result was confirmed in the context of RNase 2 (Figure 5B).
The analysis of some mutants by Western blot analysis deserves comment.
RNase 2.4 with Q9A displayed strongly decreased binding to the
modification-specific
(5-10) antibodies compared with the wild-type
enzyme (Figure 3). Nevertheless, protein chemical analysis demonstrated
84% modification of Trp-7. This would be consistent with Gln-9 forming
part of the epitope that is recognized by the antibodies, which were
raised against the peptide F-T-(C2-Man-)W-A-Q-W (Krieg
et al., 1997
). The increased binding of the mutants T6A and
F11L, modified 88 and 85% at Trp-7, respectively, is more difficult to
explain. LC-ESIMS analysis of the peptide maps excluded the possibility
that one of the other two Trp residues in RNase 2.4 had been
C-mannosylated. It seems that the mutations affect the presentation of
the epitope on the membrane to the polyclonal antibody.
Trp-7 and -10 are located in the N-terminal
-helix of RNase 2 (Mosimann et al., 1996
), with the indole moiety of Trp-7 at the surface of the molecule. In contrast, the indole of Trp-10 is
largely tucked away between side chains protruding from helices 1 and 2 (Figure 6). This raises the question as
to whether Trp-10 interacts directly with the C-mannosyltransferase or
whether it is part of a three-dimensional feature in the N terminus of
RNase 2 that is being recognized. Trp-10 interacts on the N-terminal side with the type I
-turn formed by residues Pro-2 to Phe-5, and on
the C-terminal side with the side chains of Thr-13 and Gln-14 (Mosimann
et al., 1996
). If the three-dimensional structure was
important, presumably the mutation of the residues that contact Trp-10,
i.e., Pro-2, Phe-5, Thr-13, and Gln-14 would also decrease the
efficiency of C-mannosylation. This was not the case: in fact, removal
of all
-turn forming residues, as in
(
4 to 5)RNase 2.4, and the
mutations P2A, F5A, and Q14A increased the degree of C-mannosylation,
whereas the mutation T13A did not have any effect (Figure 5). This is
corroborated by the C-mannosylation of the hybrid RNase 2 + 4, where
the appended residues are unlikely to have the same ordered structure
as present in native RNase 2 or RNase 2.4. Taken together, these
results provide strong evidence for a model in which the
C-mannosyltransferase interacts directly with the sequence
Trp-x-x-Trp in analogy to the Asn-X-Thr/Ser sequon for
N-glycosylation.
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An alternative model for the specificity of the C-mannosylation
reaction would be the existence of a "signal patch" in addition to
the sequence Trp-x-x-Trp. A signal patch has been found, among others, for UDP-GlcNAc:lysosomal enzyme
N-acetylglucosamine-1-phosphotransferase, where amino acid
residues that are separated in the primary structure form a
conformation-dependent protein determinant that interacts with the
transferase (Reitman and Kornfeld, 1985
; Baranski et al.,
1990
; Baranski et al., 1991
). RNase 2 and 4 are 31%
identical (Figure 1B) with 18 amino acids in common at the surface that could potentially form a signal patch. Although such a model cannot be
excluded based on the in vivo data alone, the data presented in the
accompanying article (Doucey et al., 1998
) argue strongly against it. The synthetic peptide comprising residues 1-12 of RNase 2 was efficiently C-mannosylated at Trp-7 in vitro, but the mutant
peptide with Trp-10 substituted by Ala did not function as a substrate.
Importantly, Trp-7 in native recombinant RNase 2 from E. coli was not C-mannosylated in vitro under the same conditions
(Doucey et al., 1998
). This shows that C-mannosylation can
only take place before complete folding of the protein. It excludes the
involvement of a conformation-dependent signal patch but confirms that
the transferase recognizes the linear determinant Trp-x-x-Trp. In such a model, the improving effect of
several of the mutations (Figure 5) could be explained if they
decreased the rate of folding. This remains to be tested.
The sequence Trp-x-x-Trp is found in RNase 2 from primates,
but does not occur in the enzyme from pig (Iwama et al., 1993
) and cow (Irie et al., 1988
). Curiously, the residue
that forms the signal, i.e., Trp-10, is present in both porcine and bovine RNase 2, but position 7 is occupied by a basic residue. This
suggests that C-mannosylation of RNase 2 has evolved relatively recently with the appearance of Trp-7 in the primates (Rosenberg et al., 1995
). In contrast, the C-mannosyltransferase
activity is not restricted to primates. Recombinant human RNase 2 isolated from porcine, mouse, and other cultured mammalian cells is
C-mannosylated (Krieg et al., 1997
), and rat liver
microsomes can C-mannosylate synthetic peptides in vitro (Doucey
et al., 1998
). This reinforces the previously formulated
hypothesis that other C-mannosylated proteins exist (Krieg et
al., 1997
).
A search of the Swiss-Prot and TrEMBL databases revealed 12,247 proteins that contain the recognition motif. However,
C-mannosyltransferase activity, using RNase 2 as the reporter protein,
has only been found in mammalian cells so far (Krieg et al.,
1997
). This, and the restriction that only proteins that cross the
endoplasmic reticulum membrane are likely to be C-mannosylated [see
the accompanying article (Doucey et al., 1998
], yielded the
336 candidates summarized in Table
1. Two of these have
been examined in more detail by peptide mapping using LC-ESIMS. The
peptide comprising residues 459-471 from the human fibrinogen B
chain, which contains the sequence W-M-N-W, was present in the
unmodified form only. Tryptic cleavage of recombinant human interleukin
12
from Chines hamster ovary cells (a generous gift from Dr. A. Stern, Roche Inc., Nutley, NJ) yielded the peptide 314-328 of the
40-kDa subunit, with Trp-319 partially C-glycosylated. The sequence
W319-S-E-W present in this peptide is in agreement with
that of the recognition motif found in human RNase 2 (Hofsteenge and
Hess, unpublished results). This opens the possibility that other
proteins containing the motif (Table 1) may be C-mannosylated as well. Their identification would not only establish the generality of this
new type of protein glycosylation but also provide ways to determine
its possible function.
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ACKNOWLEDGMENTS |
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We thank Renate Matthies for sequencing the proteins and Drs. Yoshikuni Nagamine and Jack Rohrer for reading the manuscript.
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FOOTNOTES |
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* Corresponding author.
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REFERENCES |
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-mannopyranose.
Biochemistry
34, 11785-11789[Medline]. This article has been cited by other articles:
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