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MBC in Press, published online ahead of print November 14, 2003
Mol. Biol. Cell 10.1091/mbc.E03-06-0390

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Submitted on June 11, 2003
Revised on August 16, 2003
Accepted on September 8, 2003

Interactions between Sec-complex and prepro-{alpha}-factor during posttranslational protein transport into the ER

Kathrin Plath1, Barrie M. Wilkinson2, Colin J. Stirling2, and Tom A. Rapoport3*

1 Howard Hughes Medical Institute and Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, U.S.A., Whitehead Institute, 9 Cambridge Center, Cambridge, Massachusetts 02142, USA
2 School of Biological Sciences, 2.205 Stopford Building, University of Manchester, Oxford Road, Manchester M13 9PT, United Kingdom
3 Howard Hughes Medical Institute and Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, U.S.A.

* Corresponding author. E-mail address: tom rapoport{at}hms.harvard.edu.

Posttranslational translocation of prepro-{alpha}-factor (pp{alpha}F) across the yeast endoplasmic reticulum membrane begins with the binding of the signal sequence to the Sec complex, a membrane component consisting of the trimeric Sec61p complex and the tetrameric Sec62p/63p complex. We show by photocrosslinking that the signal sequence is bound directly to a site where it contacts simultaneously Sec61p and Sec62p, suggesting that there is a single signal sequence recognition step. We found no evidence for the simultaneous contact of the signal sequence with two Sec61p molecules. To identify TM segments of Sec61p that line the actual translocation pore, a late translocation intermediate of pp{alpha}F was generated with photoreactive probes incorporated into the mature portion of the polypeptide. Cross-linking to multiple regions of Sec61p was observed. In contrast to the signal sequence, neighboring positions of the mature portion of pp{alpha}F had similar interactions with Sec61p. These data suggest that the channel pore is lined by several TM segments, which have no significant affinity for the translocating polypeptide chain.




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