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MBC in Press, published online ahead of print November 28, 2007
Mol. Biol. Cell 10.1091/mbc.E07-04-0323

A more recent version of this article appeared on February 1, 2008
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Submitted on April 10, 2007
Revised on September 19, 2007
Accepted on November 20, 2007

Conversion of a Replication Origin to a Silencer through a Pathway Shared by a Forkhead Transcription Factor and an S-Phase Cyclin

Laurieann Casey,* Erin E. Patterson,{dagger} Ulrika Müller,* and Catherine A. Fox*{dagger}

Department of *Biomolecular Chemistry and {dagger}Laboratory of Genetics, University of Wisconsin School of Medicine and Public Health, Madison, WI 53706

Monitoring Editor: Orna Cohen-Fix

Silencing of the mating-type locus HMR in S. cerevisiae requires DNA elements called silencers. To establish HMR silencing the Origin Recognition Complex binds the HMR-E silencer and recruits the Sir1 protein. Sir1 in turn helps establish silencing by stabilizing binding of the other Sir proteins, Sir2–4. However, silencing is semistable even in sir1{Delta} cells, indicating that SIR1-independent establishment mechanisms exist. Furthermore, the requirement for SIR1 in silencing a sensitized version of HMR can be bypassed by high-copy expression of FKH1 (FKH1hc), a conserved forkhead transcription factor, or by deletion of the S-phase cyclin CLB5 (clb5{Delta}). FKH1hc caused only a modest increase in Fkh1 levels but effectively reestablished Sir2–4 chromatin at HMR as determined by Sir3-directed chromatin immunoprecipitation. In addition, FKH1hc prolonged the cell cycle in a manner distinct from deletion of its close paralog FKH2, and created a cell cycle phenotype more reminiscent to that caused by a clb5{Delta}. Unexpectedly, and in contrast to SIR1, both FKH1hc and clb5{Delta} established silencing at HMR using the replication origins, ARS1 or ARSH4, as complete substitutes for HMR-E (HMR{Delta}E::ARS). HMR{Delta}E::ARS1 was a robust origin in CLB5 cells. However, initiation by HMR{Delta}E::ARS1 was reduced by clb5{Delta} or FKH1hc, while ARS1 at its native locus was unaffected. The CLB5-sensitivity of HMR{Delta}E::ARS1 did not result from formation of Sir2–4 chromatin since sir2{Delta} did not rescue origin firing in clb5{Delta} cells. These and other data supported a model in which FKH1 and CLB5 modulated Sir2–4 chromatin and late-origin firing through opposing regulation of a common pathway.


Address correspondence to: Catherine A. Fox (cfox{at}wisc.edu)







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