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Cover DNA from Drosophila embryo nuclei were exposed in
situ to an interstrand DNA crosslinking agent. The DNA was then
deproteinized and spread under fully denaturing conditions. The
micrograph (left) and contour map (right) reveal periodic "bubbled"
regions, where proteins in the native chromatin blocked access of the
crosslinker to the DNA, interspersed with nondenatured regions where
the crosslinking agent gained entry to the double helix (Hanson, C.V.,
Shen, C.-K.J., and Hearst, J.E. [1976]. Crosslinking of DNA in situ
as a probe for chromatin structure. Science 193, 62-64).
This experiment elegantly capped the breathtaking 30-month period
during which the nucleosome structure of chromatin was discovered.
First intimated by the regularly spaced pattern by which DNA in rat
liver nuclei is cut by an endogenous nuclease (Hewish, D.R., and
Burgoyne, L.A. [1973]. Chromatin substructure. The digestion of
chromatin DNA at regularly spaced sites by a nuclear deoxyribonuclease.
Biochem. Biophys. Res. Commun. 52, 504-510), nucleosomes
were convincingly observed 8 months later (Olins, A.L., and Olins, D.E.
[1974]. Spheroid chromatin units (v bodies). Science
183, 330-331). Soon thereafter, Roger Kornberg and Jean
Thomas defined the histone protein-protein pairing associations that
constitute the nucleosome [Kornberg, R.D., and Thomas, J.O. [1974].
Chromatin structure; oligomers of the histones. Science 184:
865-868; Kornberg, R.D. [1974]. Chromatin structure: a repeating unit of histones and DNA. Science 184, 868-871). Thus, the
discovery of the nucleosome was an example of convergent science, in
which three approaches came together contemporaneously. The first two approaches were electron microscopy of spread chromatin (Olins and
Olins, op. cit.) and biochemical studies on purified
histones and extracted chromatin (Kornberg and Thomas. op.
cit.). The third approach (Hanson, Shen, and Hearst, op.
cit.) was a prescient antecedent to the field we today call
chemical biology, in which small molecules are applied to report on
biology in native systems. The probe ingeniously employed by Hearst and
colleagues was a relative of a family of natural products, psoralens,
derived from plants of the umbelliferae family (e.g.,
celery, parsnips) and was used by ancient Hindu physicians to
photodynamically treat (with sunlight) hyperplastic skin diseases.
Psoralens were plausibly reasoned, 2000 years later, to permeate into
cell nuclei. Interstrand crosslinking of DNA by psoralen compounds was
reported in 1971. It only remained for a creative laboratory to put
everything together and show us nucleosomes in native cell nuclei, as
Hearst and colleagues did so ingeniously and convincingly. The figure
is reproduced from Science, 1976, 193, 62-64,
with copyright permission.
Thoru Pederson